| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is galT [H]
Identifier: 158313141
GI number: 158313141
Start: 1555208
End: 1556572
Strand: Direct
Name: galT [H]
Synonym: Franean1_1289
Alternate gene names: 158313141
Gene position: 1555208-1556572 (Clockwise)
Preceding gene: 158313136
Following gene: 158313147
Centisome position: 17.31
GC content: 73.63
Gene sequence:
>1365_bases GTGCTGGTCTCGGTTTTCCCGTCCGATGACGGTCCTGGTCCGGACGATCAGCCCGGGCCGGGGGGCGCCGGCGACCGGCG CGGCGAGACGCCCTCGCCGAACGGGCAGGCTGCGGCCGGGCCCGCGGCGCACCGGCGGCACGATCCGCTGGGCGATCGCT GGATCATCGTCTCGGCGGGCCGGGTGGCGCGCCCGTGGCGCGGCGGCCAGGAAGTGGTCGCCACCGCCGTGGGGACCTAC GACCCCGAATGCCATCTCTGCCCGGGAAACGTGCGCGCCTCCGGCAAGGCGAATCCCGACTACGACGGCGTTTACGTGTT CGACAACGACTTCCCGGCGCTGCGCCCCGAGCCCGCGGACCTGGCCGCGTCTCCCGATCAGGCGGTGTCTCCCGATCAGG CGGTGTTTGCTGATCCGTCCGGGCTGGATGCGCGGGCGGCGGGGCTGCTGCACGCCGAGCCGGGCATCGGCACGTGCCGC GTCGTCTGCTTCGACCCGGGCCACGACCAGTCACTGGCGAGCCTGGGGCTCGACCGGGTGCGGGCGGTGGTCGACACCTG GGCCGACCAGGAGCGTGAGCTCGGCCGGACCTGGAACTGGGTGCAGATCTTCGAGAACCGCGGCGCCGCGATGGGGGCGT CCAGCCCGCACCCGCACGGGCAGATCTGGGCGTCGTCGTTCCTGCCCGACCTCGCCGCGGTCGAGGACCGCACCCAGCGC GACCATCTACGGTCCAGGGGCACCTCGCTGCTGGTCGACTACGCGGCGCTGGAGGCTGAGCTCGCCGCCGCGGATGACGG CGCCAGCACCGCCGCCGCCAGCAGAGTCGCTGCTGGCAAGGCCACCAACGGCAAAGCCACCAATGGCAAAGCCACTGACG GCGTGGACGGCCCCGGCCGGTCCGCGAGCCGGGTGGTCGTGGCGAACGACCACTGGCTCGTCGTCGTCCCCTACTGGGCG TTCTGGCCGTTCGAGACGCTGGTGCTCCCGCGCCGCCCGGTCGGCCTGCTCCAGCACCTGACCGACGCCGAGCGCGACGC GCTGGCACAGGCGCTGCGGTCCCTGCTCAGCTGCTACGACGCGCTGTTCGACTCGCCCTTCCCCTACTCGATGGGCTGGC ACGCGGCGCCCGGCGCGCGCCCGGATCCCGACGCGCCGGTGCCCGCGCACTGGCAGCTGCATGCCCACTTCCACCCGCCG CTGCTGCGGTCACCGACCGTCCGCAAGCACCTGGTGGGCTACGAGATGTTCGCAGGCGTGCTACGCGACATCACCCCGGA GGACGCCGCCGCCCGGCTGCGGGCCGCCGGGGCGCGCGCGGAGAAACGGACAACAGAGCCCACACGGGGGCTCATGCCGG GATGA
Upstream 100 bases:
>100_bases CTGCTAGTAGTGGTGGGGGCGGTAGCGGGTCGTCCGCCGGCGGCGGTGACGCATGTCTCTGGCGCCGGAGGCGCCGGTGG GGCGTTGATACGGTTCGTCC
Downstream 100 bases:
>100_bases TCCCGAGCGGTGGCCTGGCTTCCGGTGGCAGCAGACGCGGGGGTCAGCGGGTGCTGGGGAGTGCCGTCGTCCCGGACCAC TGCTGGGAGAACCCCCACAG
Product: galactose-1-phosphate uridylyltransferase
Products: NA
Alternate protein names: Gal-1-P uridylyltransferase; UDP-glucose--hexose-1-phosphate uridylyltransferase [H]
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MLVSVFPSDDGPGPDDQPGPGGAGDRRGETPSPNGQAAAGPAAHRRHDPLGDRWIIVSAGRVARPWRGGQEVVATAVGTY DPECHLCPGNVRASGKANPDYDGVYVFDNDFPALRPEPADLAASPDQAVSPDQAVFADPSGLDARAAGLLHAEPGIGTCR VVCFDPGHDQSLASLGLDRVRAVVDTWADQERELGRTWNWVQIFENRGAAMGASSPHPHGQIWASSFLPDLAAVEDRTQR DHLRSRGTSLLVDYAALEAELAAADDGASTAAASRVAAGKATNGKATNGKATDGVDGPGRSASRVVVANDHWLVVVPYWA FWPFETLVLPRRPVGLLQHLTDAERDALAQALRSLLSCYDALFDSPFPYSMGWHAAPGARPDPDAPVPAHWQLHAHFHPP LLRSPTVRKHLVGYEMFAGVLRDITPEDAAARLRAAGARAEKRTTEPTRGLMPG
Sequences:
>Translated_454_residues MLVSVFPSDDGPGPDDQPGPGGAGDRRGETPSPNGQAAAGPAAHRRHDPLGDRWIIVSAGRVARPWRGGQEVVATAVGTY DPECHLCPGNVRASGKANPDYDGVYVFDNDFPALRPEPADLAASPDQAVSPDQAVFADPSGLDARAAGLLHAEPGIGTCR VVCFDPGHDQSLASLGLDRVRAVVDTWADQERELGRTWNWVQIFENRGAAMGASSPHPHGQIWASSFLPDLAAVEDRTQR DHLRSRGTSLLVDYAALEAELAAADDGASTAAASRVAAGKATNGKATNGKATDGVDGPGRSASRVVVANDHWLVVVPYWA FWPFETLVLPRRPVGLLQHLTDAERDALAQALRSLLSCYDALFDSPFPYSMGWHAAPGARPDPDAPVPAHWQLHAHFHPP LLRSPTVRKHLVGYEMFAGVLRDITPEDAAARLRAAGARAEKRTTEPTRGLMPG >Mature_454_residues MLVSVFPSDDGPGPDDQPGPGGAGDRRGETPSPNGQAAAGPAAHRRHDPLGDRWIIVSAGRVARPWRGGQEVVATAVGTY DPECHLCPGNVRASGKANPDYDGVYVFDNDFPALRPEPADLAASPDQAVSPDQAVFADPSGLDARAAGLLHAEPGIGTCR VVCFDPGHDQSLASLGLDRVRAVVDTWADQERELGRTWNWVQIFENRGAAMGASSPHPHGQIWASSFLPDLAAVEDRTQR DHLRSRGTSLLVDYAALEAELAAADDGASTAAASRVAAGKATNGKATNGKATDGVDGPGRSASRVVVANDHWLVVVPYWA FWPFETLVLPRRPVGLLQHLTDAERDALAQALRSLLSCYDALFDSPFPYSMGWHAAPGARPDPDAPVPAHWQLHAHFHPP LLRSPTVRKHLVGYEMFAGVLRDITPEDAAARLRAAGARAEKRTTEPTRGLMPG
Specific function: Galactose metabolism; second step. [C]
COG id: COG1085
COG function: function code C; Galactose-1-phosphate uridylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the galactose-1-phosphate uridylyltransferase type 1 family [H]
Homologues:
Organism=Homo sapiens, GI22165416, Length=394, Percent_Identity=44.4162436548223, Blast_Score=325, Evalue=6e-89, Organism=Escherichia coli, GI1786973, Length=395, Percent_Identity=46.5822784810127, Blast_Score=338, Evalue=6e-94, Organism=Caenorhabditis elegans, GI17557105, Length=398, Percent_Identity=37.4371859296482, Blast_Score=273, Evalue=2e-73, Organism=Saccharomyces cerevisiae, GI6319492, Length=401, Percent_Identity=36.9077306733167, Blast_Score=268, Evalue=1e-72, Organism=Drosophila melanogaster, GI24582285, Length=406, Percent_Identity=37.192118226601, Blast_Score=273, Evalue=1e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001937 - InterPro: IPR019779 - InterPro: IPR005850 - InterPro: IPR005849 - InterPro: IPR011146 - InterPro: IPR011151 [H]
Pfam domain/function: PF02744 GalP_UDP_tr_C; PF01087 GalP_UDP_transf [H]
EC number: =2.7.7.12 [H]
Molecular weight: Translated: 48346; Mature: 48346
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS00117 GAL_P_UDP_TRANSF_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVSVFPSDDGPGPDDQPGPGGAGDRRGETPSPNGQAAAGPAAHRRHDPLGDRWIIVSAG CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECC RVARPWRGGQEVVATAVGTYDPECHLCPGNVRASGKANPDYDGVYVFDNDFPALRPEPAD CCCCCCCCCHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC LAASPDQAVSPDQAVFADPSGLDARAAGLLHAEPGIGTCRVVCFDPGHDQSLASLGLDRV CCCCCCCCCCCCCEEEECCCCCCHHHCCEEECCCCCCEEEEEEECCCCCHHHHHHHHHHH RAVVDTWADQERELGRTWNWVQIFENRGAAMGASSPHPHGQIWASSFLPDLAAVEDRTQR HHHHHHHHHHHHHHCCCCCHHHHEECCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHH DHLRSRGTSLLVDYAALEAELAAADDGASTAAASRVAAGKATNGKATNGKATDGVDGPGR HHHHHCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC SASRVVVANDHWLVVVPYWAFWPFETLVLPRRPVGLLQHLTDAERDALAQALRSLLSCYD CCCEEEEECCCEEEEECCCCCCCHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALFDSPFPYSMGWHAAPGARPDPDAPVPAHWQLHAHFHPPLLRSPTVRKHLVGYEMFAGV HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHH LRDITPEDAAARLRAAGARAEKRTTEPTRGLMPG HHCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCC >Mature Secondary Structure MLVSVFPSDDGPGPDDQPGPGGAGDRRGETPSPNGQAAAGPAAHRRHDPLGDRWIIVSAG CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECC RVARPWRGGQEVVATAVGTYDPECHLCPGNVRASGKANPDYDGVYVFDNDFPALRPEPAD CCCCCCCCCHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC LAASPDQAVSPDQAVFADPSGLDARAAGLLHAEPGIGTCRVVCFDPGHDQSLASLGLDRV CCCCCCCCCCCCCEEEECCCCCCHHHCCEEECCCCCCEEEEEEECCCCCHHHHHHHHHHH RAVVDTWADQERELGRTWNWVQIFENRGAAMGASSPHPHGQIWASSFLPDLAAVEDRTQR HHHHHHHHHHHHHHCCCCCHHHHEECCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHH DHLRSRGTSLLVDYAALEAELAAADDGASTAAASRVAAGKATNGKATNGKATDGVDGPGR HHHHHCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC SASRVVVANDHWLVVVPYWAFWPFETLVLPRRPVGLLQHLTDAERDALAQALRSLLSCYD CCCEEEEECCCEEEEECCCCCCCHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALFDSPFPYSMGWHAAPGARPDPDAPVPAHWQLHAHFHPPLLRSPTVRKHLVGYEMFAGV HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHH LRDITPEDAAARLRAAGARAEKRTTEPTRGLMPG HHCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3022232; 8905232; 9278503; 3158881; 2823224; 321007; 8794735; 10820011; 7669762; 9063869 [H]