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The map label for this gene is ykwD [H]

Identifier: 158313134

GI number: 158313134

Start: 1545418

End: 1546371

Strand: Direct

Name: ykwD [H]

Synonym: Franean1_1282

Alternate gene names: 158313134

Gene position: 1545418-1546371 (Clockwise)

Preceding gene: 158313133

Following gene: 158313135

Centisome position: 17.21

GC content: 74.84

Gene sequence:

>954_bases
GTGGCTGGTGGGAGAGAGGCGGAGGGCCGGATGACGGAGCTGGTGTCCGGCGCGAACCTGACCCTGCCCGGCCCCGTGGT
CGCGTTGTCACTCCCCGGTCCCTTCGATGTGACCGCTCTGGTCCTCGGGCCGGACGGCCGAGTCTCCGGCGACCGGGACA
TGATCTTCTACAACCAGCCGACCGGTCCCGGTGTCACCCTGCGCGCCACCGCGGGCGTGCCTTCCGTCGAGCTCGACCTG
GATGGCCTGCGCCCCGGCGGTGAGCGGGTCGTCCTGGTCGCGAGCCCCGCCGACGGCGCCACCCCCTTCGGTCGGCTGCC
ACCACCGCTGGCCACCCTGCGCGCCGCCGGCCGCACGATCGCGACGCTGCGCCCACCCCGCCTCGGGACGCAGACGGCGC
TACAGCTCGCCGAGCTCTACCGGCGGGACAGGAACTGGAAGATCCGCGCGCTCGGCCTGGGCTACGCGGACGGACTGGCC
GGGCTCGCCCGCGACTTCGGCGTCGATGTCAGCGCTGATGGCGGCGTCGACGCCGGGCCGGCCGGGGGAGTTTCCCGCGC
GCCGGACGGTGGGGACCTCGCCGAGGTCGTGGCGCTGACGAACGTCGAACGAGCCCGGGGCGGCCTGGTCGCCCTGGTCA
CCGAGCCGCGGCTGGCCGCGGCGGCGCGCAGGCACAGCGCCGACATGGCGACCCGGGGGTTCTTCGCCCACGACACCCCG
GACGGCATCACGGTGGCCGACCGGGTCCTGGCCGCCGGCTACTCCTACGCCGTCGTGGCCGAGAACATCGCGGCCGGCCA
GCGCACCGCCGCCGAGGTGGTCGCCGGCTGGATGAACAGCCCGCCGCACCGCGCGAACATCCTGCGCCCCGAGGTCCGCC
AGATAGGCGTGGCCCGCTTCGACGGCGGCGAGTACGGCGTCTACTGGACCCAGGTCTTCGGCACCCCCCGCTGA

Upstream 100 bases:

>100_bases
GATCTAGACGTCCCTTCGGGCCGTGGGCCCGGCGGAACCTCTCCGCGTGCCGCTCGTTCCACGTGTGGTGGGGCGGCGCC
GCACCGATGCGCGGAGCCCG

Downstream 100 bases:

>100_bases
CTCCCGCCCCCGGCACTTCGGTGTGTCCCCACGCTGGTGGAATTGCGGTGGCCGTCCATTGCCGGCGGCAGCCGGGTCCA
AAGGTGGCGATTCGTCGGCG

Product: SCP-like extracellular protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MAGGREAEGRMTELVSGANLTLPGPVVALSLPGPFDVTALVLGPDGRVSGDRDMIFYNQPTGPGVTLRATAGVPSVELDL
DGLRPGGERVVLVASPADGATPFGRLPPPLATLRAAGRTIATLRPPRLGTQTALQLAELYRRDRNWKIRALGLGYADGLA
GLARDFGVDVSADGGVDAGPAGGVSRAPDGGDLAEVVALTNVERARGGLVALVTEPRLAAAARRHSADMATRGFFAHDTP
DGITVADRVLAAGYSYAVVAENIAAGQRTAAEVVAGWMNSPPHRANILRPEVRQIGVARFDGGEYGVYWTQVFGTPR

Sequences:

>Translated_317_residues
MAGGREAEGRMTELVSGANLTLPGPVVALSLPGPFDVTALVLGPDGRVSGDRDMIFYNQPTGPGVTLRATAGVPSVELDL
DGLRPGGERVVLVASPADGATPFGRLPPPLATLRAAGRTIATLRPPRLGTQTALQLAELYRRDRNWKIRALGLGYADGLA
GLARDFGVDVSADGGVDAGPAGGVSRAPDGGDLAEVVALTNVERARGGLVALVTEPRLAAAARRHSADMATRGFFAHDTP
DGITVADRVLAAGYSYAVVAENIAAGQRTAAEVVAGWMNSPPHRANILRPEVRQIGVARFDGGEYGVYWTQVFGTPR
>Mature_316_residues
AGGREAEGRMTELVSGANLTLPGPVVALSLPGPFDVTALVLGPDGRVSGDRDMIFYNQPTGPGVTLRATAGVPSVELDLD
GLRPGGERVVLVASPADGATPFGRLPPPLATLRAAGRTIATLRPPRLGTQTALQLAELYRRDRNWKIRALGLGYADGLAG
LARDFGVDVSADGGVDAGPAGGVSRAPDGGDLAEVVALTNVERARGGLVALVTEPRLAAAARRHSADMATRGFFAHDTPD
GITVADRVLAAGYSYAVVAENIAAGQRTAAEVVAGWMNSPPHRANILRPEVRQIGVARFDGGEYGVYWTQVFGTPR

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044
- InterPro:   IPR014258 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 32873; Mature: 32741

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGGREAEGRMTELVSGANLTLPGPVVALSLPGPFDVTALVLGPDGRVSGDRDMIFYNQP
CCCCCCCCCHHHHHHCCCCEECCCCEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEECC
TGPGVTLRATAGVPSVELDLDGLRPGGERVVLVASPADGATPFGRLPPPLATLRAAGRTI
CCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCEE
ATLRPPRLGTQTALQLAELYRRDRNWKIRALGLGYADGLAGLARDFGVDVSADGGVDAGP
EEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCC
AGGVSRAPDGGDLAEVVALTNVERARGGLVALVTEPRLAAAARRHSADMATRGFFAHDTP
CCCCCCCCCCCCHHHHHHHHCHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCEECCCCC
DGITVADRVLAAGYSYAVVAENIAAGQRTAAEVVAGWMNSPPHRANILRPEVRQIGVARF
CCCHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCEEEE
DGGEYGVYWTQVFGTPR
CCCCCCEEEEEECCCCC
>Mature Secondary Structure 
AGGREAEGRMTELVSGANLTLPGPVVALSLPGPFDVTALVLGPDGRVSGDRDMIFYNQP
CCCCCCCCHHHHHHCCCCEECCCCEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEECC
TGPGVTLRATAGVPSVELDLDGLRPGGERVVLVASPADGATPFGRLPPPLATLRAAGRTI
CCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCEE
ATLRPPRLGTQTALQLAELYRRDRNWKIRALGLGYADGLAGLARDFGVDVSADGGVDAGP
EEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCC
AGGVSRAPDGGDLAEVVALTNVERARGGLVALVTEPRLAAAARRHSADMATRGFFAHDTP
CCCCCCCCCCCCHHHHHHHHCHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCEECCCCC
DGITVADRVLAAGYSYAVVAENIAAGQRTAAEVVAGWMNSPPHRANILRPEVRQIGVARF
CCCHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCEEEE
DGGEYGVYWTQVFGTPR
CCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]