| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313125
Identifier: 158313125
GI number: 158313125
Start: 1532980
End: 1534755
Strand: Direct
Name: 158313125
Synonym: Franean1_1273
Alternate gene names: NA
Gene position: 1532980-1534755 (Clockwise)
Preceding gene: 158313124
Following gene: 158313126
Centisome position: 17.07
GC content: 72.97
Gene sequence:
>1776_bases GTGGCGGGCGGCGCGTTGCTGCTGGTCGTCCTACTTGGGGCCGGCACCTGGATCGTCGTGCGCGGCCTGCTCGCGCGGTC GCACCTGGAAGCCGCCCAGGCCCAGGTCTCCCAGTTGCAGGCCGCCGTCTCGAGCGGCGCGGTCCCCGAGGAGGCCGAGC TGCGCCGGGCCGTCGACGAGATCACCGCGCGGGCCGAGTCGGCCCGCGCGCTCACCGCCGACCCGCTGTGGTCGCTGGCC GGGCACGTGCCGCTGGCGGGGTGCTCGCTGCGCTCCAGCGCGACTATCGCCGCCGCGCTCGACGTGGCCGCGGGCGCGCT GCAGCCGATCGCTGAGCTGGGGGACCGGCTGGCCCCGTCCAGCCTGCGGTCGGGGGCGGCGGTGAACATCGGGGCGCTGG CCGCGGCGCGGGCGCCCGCCGAGTGGGCCCGGGCGGCCGTCGACTCGTTCGAGGCGGCCGCTCGACGGGTCTCCGACTGC GGGTGGCTCGGCGACGCGGTCGGCCTCGACGATGCTCGGGGGCAGGCGGTCGACACCGGCTCCCGGCTGTACGGCGCGCT CGACGCGTTGGTCCTCGCCACCCGGCTGGGCCCGGGGATGCTCGGCGCGGACGGCCCCCGCCGCTACCTGATCGTCGTGC AGAACCCGGCCGAGTCGCGGGCGAACGGCGGCATCATCGGCGGGTTCGGCGTGTTGACGGTCATCGACGGCCGGCTGACG TTCGACGACATCTCAGGTAGCGGCAGGCTGCCCGGCGGGCCGACCCAGATCCGGCCGGCCACCGACCTGTCGCCGGAGCT CATGGCGCGTTACGGCCCCTTCCAGCCCGCGCGCGTATGGGCGAACGCCAACCTCACACCCGACTACCCGACCGCGGGAC GCCTGTACTCCGAGCTCTACCACGCCGGCACGGGGACAGCGGTCGACGGGACGATCAGCCTTGACCCCACCACGCTGTCC TACCTGCTGGCGGAGACCCGCCCGGTGGTCCTCCCCGACGGCCGGGTGATCCCGGCGAACGAGCTGGTCGAGTTGGTCGA GTCCCAGGTCTACCAGGAGATCGACGGCGTCGGGGCACGGGACGAGTCCTTCGCCGCGGTCGACAAGGCGGTCGTGCCGG ACGCGGGTGCCGCGGGCGGTACGGAGAACTTCCTGCGCGTCATGGCCCGTGCCGCACGCGAAGGCCGGCTGCTGGTGTCG AGTAACCACGCCGACGAACAGGAAGTGCTTTCCTCGACGGCGCTCGGTGGGGCACTGCCGGAGGCGGCCGGCCCGTTCCT CGGGGTCGTCACGCAGAACGCGACAGAGAGCAAGCTTGACTACTGGCTGCGACGTAGCACCACCTACCGAATGGAGCGAC AGCCCGACGGAACCGGACGCGTGACGATCACCGTGCGGCTGATGAACGCCGCGCCGGCGGCTCTGAGTGACTACGTCCGC CACCGCAGCGACGTCGAGGGCCCCGCCCAGCGGAACGAGGAGGCCCAGAACAAGCTGTGGTTCTCCCTCTACACCGGGCA TGGGAGCCGGTTCGCCGGCGCGCGCCTCGACGGCAGGGCTGTCTCGCTGACCTCGGGAGAGGAACGCGGCCACCCGGTCC TGTCGACGTATCTGACGGTCGACCGGGGCCAGACGCGGACGCTGCAGGTCCGCGTTCTGGAACCGGTGGCCGGCCCGACA CTCGCCGTTCGTGGCCAGCCTCTGACGGTTCCCGAGCGCCTGGTGGTTGAGGGGCTGCCCGTCACCTCACCTTGGTCGCG GAGAGTCAGAAAGTAG
Upstream 100 bases:
>100_bases GGGGGAAGCGGAACAGCCGTCCGGAGTAGCGGAGGAACGGCCGGGCGGCGGTGGCACGGGCTCGTCGCCGCGGCGGGAGT GGCGACCGGACCGGCGGATC
Downstream 100 bases:
>100_bases GTGCGAAGCGTTCTAGACACTGAGAGTAACCGTCTGTAGTCTCCCTGTAGTCAATCATCCGACTGTTTGAACGGATCATG CTCAGGGGGAGTTTCTGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 591; Mature: 590
Protein sequence:
>591_residues MAGGALLLVVLLGAGTWIVVRGLLARSHLEAAQAQVSQLQAAVSSGAVPEEAELRRAVDEITARAESARALTADPLWSLA GHVPLAGCSLRSSATIAAALDVAAGALQPIAELGDRLAPSSLRSGAAVNIGALAAARAPAEWARAAVDSFEAAARRVSDC GWLGDAVGLDDARGQAVDTGSRLYGALDALVLATRLGPGMLGADGPRRYLIVVQNPAESRANGGIIGGFGVLTVIDGRLT FDDISGSGRLPGGPTQIRPATDLSPELMARYGPFQPARVWANANLTPDYPTAGRLYSELYHAGTGTAVDGTISLDPTTLS YLLAETRPVVLPDGRVIPANELVELVESQVYQEIDGVGARDESFAAVDKAVVPDAGAAGGTENFLRVMARAAREGRLLVS SNHADEQEVLSSTALGGALPEAAGPFLGVVTQNATESKLDYWLRRSTTYRMERQPDGTGRVTITVRLMNAAPAALSDYVR HRSDVEGPAQRNEEAQNKLWFSLYTGHGSRFAGARLDGRAVSLTSGEERGHPVLSTYLTVDRGQTRTLQVRVLEPVAGPT LAVRGQPLTVPERLVVEGLPVTSPWSRRVRK
Sequences:
>Translated_591_residues MAGGALLLVVLLGAGTWIVVRGLLARSHLEAAQAQVSQLQAAVSSGAVPEEAELRRAVDEITARAESARALTADPLWSLA GHVPLAGCSLRSSATIAAALDVAAGALQPIAELGDRLAPSSLRSGAAVNIGALAAARAPAEWARAAVDSFEAAARRVSDC GWLGDAVGLDDARGQAVDTGSRLYGALDALVLATRLGPGMLGADGPRRYLIVVQNPAESRANGGIIGGFGVLTVIDGRLT FDDISGSGRLPGGPTQIRPATDLSPELMARYGPFQPARVWANANLTPDYPTAGRLYSELYHAGTGTAVDGTISLDPTTLS YLLAETRPVVLPDGRVIPANELVELVESQVYQEIDGVGARDESFAAVDKAVVPDAGAAGGTENFLRVMARAAREGRLLVS SNHADEQEVLSSTALGGALPEAAGPFLGVVTQNATESKLDYWLRRSTTYRMERQPDGTGRVTITVRLMNAAPAALSDYVR HRSDVEGPAQRNEEAQNKLWFSLYTGHGSRFAGARLDGRAVSLTSGEERGHPVLSTYLTVDRGQTRTLQVRVLEPVAGPT LAVRGQPLTVPERLVVEGLPVTSPWSRRVRK >Mature_590_residues AGGALLLVVLLGAGTWIVVRGLLARSHLEAAQAQVSQLQAAVSSGAVPEEAELRRAVDEITARAESARALTADPLWSLAG HVPLAGCSLRSSATIAAALDVAAGALQPIAELGDRLAPSSLRSGAAVNIGALAAARAPAEWARAAVDSFEAAARRVSDCG WLGDAVGLDDARGQAVDTGSRLYGALDALVLATRLGPGMLGADGPRRYLIVVQNPAESRANGGIIGGFGVLTVIDGRLTF DDISGSGRLPGGPTQIRPATDLSPELMARYGPFQPARVWANANLTPDYPTAGRLYSELYHAGTGTAVDGTISLDPTTLSY LLAETRPVVLPDGRVIPANELVELVESQVYQEIDGVGARDESFAAVDKAVVPDAGAAGGTENFLRVMARAAREGRLLVSS NHADEQEVLSSTALGGALPEAAGPFLGVVTQNATESKLDYWLRRSTTYRMERQPDGTGRVTITVRLMNAAPAALSDYVRH RSDVEGPAQRNEEAQNKLWFSLYTGHGSRFAGARLDGRAVSLTSGEERGHPVLSTYLTVDRGQTRTLQVRVLEPVAGPTL AVRGQPLTVPERLVVEGLPVTSPWSRRVRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62050; Mature: 61919
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGGALLLVVLLGAGTWIVVRGLLARSHLEAAQAQVSQLQAAVSSGAVPEEAELRRAVDE CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH ITARAESARALTADPLWSLAGHVPLAGCSLRSSATIAAALDVAAGALQPIAELGDRLAPS HHHHHHHCCCEECCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH SLRSGAAVNIGALAAARAPAEWARAAVDSFEAAARRVSDCGWLGDAVGLDDARGQAVDTG HHCCCCEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCH SRLYGALDALVLATRLGPGMLGADGPRRYLIVVQNPAESRANGGIIGGFGVLTVIDGRLT HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEECCEEEEEECCEEE FDDISGSGRLPGGPTQIRPATDLSPELMARYGPFQPARVWANANLTPDYPTAGRLYSELY EECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHH HAGTGTAVDGTISLDPTTLSYLLAETRPVVLPDGRVIPANELVELVESQVYQEIDGVGAR HCCCCCEECCEEEECHHHHHHHHHCCCCEECCCCCEECHHHHHHHHHHHHHHHHHCCCCC DESFAAVDKAVVPDAGAAGGTENFLRVMARAAREGRLLVSSNHADEQEVLSSTALGGALP CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHCCCCCC EAAGPFLGVVTQNATESKLDYWLRRSTTYRMERQPDGTGRVTITVRLMNAAPAALSDYVR HHCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEEECCCCHHHHHHHH HRSDVEGPAQRNEEAQNKLWFSLYTGHGSRFAGARLDGRAVSLTSGEERGHPVLSTYLTV HHCCCCCCHHCCHHHHHCEEEEEEECCCCEECCCCCCCEEEEECCCCCCCCCEEEEEEEE DRGQTRTLQVRVLEPVAGPTLAVRGQPLTVPERLVVEGLPVTSPWSRRVRK CCCCCEEEEEEEECCCCCCEEEECCCCCCCCHHHHHCCCCCCCHHHHHCCC >Mature Secondary Structure AGGALLLVVLLGAGTWIVVRGLLARSHLEAAQAQVSQLQAAVSSGAVPEEAELRRAVDE CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH ITARAESARALTADPLWSLAGHVPLAGCSLRSSATIAAALDVAAGALQPIAELGDRLAPS HHHHHHHCCCEECCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH SLRSGAAVNIGALAAARAPAEWARAAVDSFEAAARRVSDCGWLGDAVGLDDARGQAVDTG HHCCCCEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCH SRLYGALDALVLATRLGPGMLGADGPRRYLIVVQNPAESRANGGIIGGFGVLTVIDGRLT HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEECCEEEEEECCEEE FDDISGSGRLPGGPTQIRPATDLSPELMARYGPFQPARVWANANLTPDYPTAGRLYSELY EECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHH HAGTGTAVDGTISLDPTTLSYLLAETRPVVLPDGRVIPANELVELVESQVYQEIDGVGAR HCCCCCEECCEEEECHHHHHHHHHCCCCEECCCCCEECHHHHHHHHHHHHHHHHHCCCCC DESFAAVDKAVVPDAGAAGGTENFLRVMARAAREGRLLVSSNHADEQEVLSSTALGGALP CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHCCCCCC EAAGPFLGVVTQNATESKLDYWLRRSTTYRMERQPDGTGRVTITVRLMNAAPAALSDYVR HHCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEEECCCCHHHHHHHH HRSDVEGPAQRNEEAQNKLWFSLYTGHGSRFAGARLDGRAVSLTSGEERGHPVLSTYLTV HHCCCCCCHHCCHHHHHCEEEEEEECCCCEECCCCCCCEEEEECCCCCCCCCEEEEEEEE DRGQTRTLQVRVLEPVAGPTLAVRGQPLTVPERLVVEGLPVTSPWSRRVRK CCCCCEEEEEEEECCCCCCEEEECCCCCCCCHHHHHCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA