| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313095
Identifier: 158313095
GI number: 158313095
Start: 1496984
End: 1497523
Strand: Direct
Name: 158313095
Synonym: Franean1_1243
Alternate gene names: NA
Gene position: 1496984-1497523 (Clockwise)
Preceding gene: 158313094
Following gene: 158313097
Centisome position: 16.67
GC content: 72.78
Gene sequence:
>540_bases GTGCGACACGGGCGCTCACGCCAGGCCAACCACCACTCCCTCCCCGACCTCAACTCCGCCGTGTCGAAGGAGCAGTTAGG CGCCAGTCAAATCAATAGAAGCTACGCATACCGGACGTCGCGGACGGCTTGGCTGGCATGGCCTGGAGGCACGGACGGGG CGGGTGGGCCGGCGCCCAACGGCGTCGGCGGGTCGGGGCAGCTCGGCGCCCGACGGGCCGACCAGCACCTGCCGCGGCCC GCATATAAACCCGCGCGCTTTACCTGGAACGTGCCGGAGGTCTCAGGACCGCCACCGGATGCCGTGCCGGCGCGCGCCAC CGCCGGAGGGCTCGGCGATCGGTGGCGGATCTGCCGGGATCCGCCACGGCGGGATCTCGGCTGCCTGAGGCTCAGCCGCG CCCGCGCCGTCCAGGGTCCCCGGCGGCCGTGTCTGCGGGCCAGTAGCGGCCCTCAGAGCGTCCCTGTGGCCTTTGTGGCG GCTTTCCGAGGTTGTCCCCCGCCGGCACCCCCCGATCGGGGTTGCTTCCGTCCCGGCTGA
Upstream 100 bases:
>100_bases ACGGCCGCGAGATGCCTGGGCCGGTAGGCGCCCTCGGCAGCGCCGCGATCATCCGCAAAGGCGGTGTCTGGCCCGGCGCA TCACGACACAGGTCGACCCG
Downstream 100 bases:
>100_bases GTCCACTTCGCGCGGGCGGCCCGGCAGGTTCCGCCGACGACCGGCCGGCCCCGCCCGTCGGGGCCCGGCGGCCCGTTGGG CCCATCTCCCGAGGGTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MRHGRSRQANHHSLPDLNSAVSKEQLGASQINRSYAYRTSRTAWLAWPGGTDGAGGPAPNGVGGSGQLGARRADQHLPRP AYKPARFTWNVPEVSGPPPDAVPARATAGGLGDRWRICRDPPRRDLGCLRLSRARAVQGPRRPCLRASSGPQSVPVAFVA AFRGCPPPAPPDRGCFRPG
Sequences:
>Translated_179_residues MRHGRSRQANHHSLPDLNSAVSKEQLGASQINRSYAYRTSRTAWLAWPGGTDGAGGPAPNGVGGSGQLGARRADQHLPRP AYKPARFTWNVPEVSGPPPDAVPARATAGGLGDRWRICRDPPRRDLGCLRLSRARAVQGPRRPCLRASSGPQSVPVAFVA AFRGCPPPAPPDRGCFRPG >Mature_179_residues MRHGRSRQANHHSLPDLNSAVSKEQLGASQINRSYAYRTSRTAWLAWPGGTDGAGGPAPNGVGGSGQLGARRADQHLPRP AYKPARFTWNVPEVSGPPPDAVPARATAGGLGDRWRICRDPPRRDLGCLRLSRARAVQGPRRPCLRASSGPQSVPVAFVA AFRGCPPPAPPDRGCFRPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19066; Mature: 19066
Theoretical pI: Translated: 12.01; Mature: 12.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHGRSRQANHHSLPDLNSAVSKEQLGASQINRSYAYRTSRTAWLAWPGGTDGAGGPAPN CCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC GVGGSGQLGARRADQHLPRPAYKPARFTWNVPEVSGPPPDAVPARATAGGLGDRWRICRD CCCCCCCCCCHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPRRDLGCLRLSRARAVQGPRRPCLRASSGPQSVPVAFVAAFRGCPPPAPPDRGCFRPG CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MRHGRSRQANHHSLPDLNSAVSKEQLGASQINRSYAYRTSRTAWLAWPGGTDGAGGPAPN CCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC GVGGSGQLGARRADQHLPRPAYKPARFTWNVPEVSGPPPDAVPARATAGGLGDRWRICRD CCCCCCCCCCHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPRRDLGCLRLSRARAVQGPRRPCLRASSGPQSVPVAFVAAFRGCPPPAPPDRGCFRPG CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA