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The map label for this gene is ylmA [H]

Identifier: 158313094

GI number: 158313094

Start: 1495813

End: 1496733

Strand: Direct

Name: ylmA [H]

Synonym: Franean1_1242

Alternate gene names: 158313094

Gene position: 1495813-1496733 (Clockwise)

Preceding gene: 158313093

Following gene: 158313095

Centisome position: 16.65

GC content: 74.81

Gene sequence:

>921_bases
GTGGGTGTGCTCCGGTGGGGGCGCGGTGGTGCGTTCGCGCCGGCAGGTCCACCCGCCTCCGGCCGGGGTCGCGTCTCGCG
TAACGTGAGCGCCATGCCGGACGCGGTGCTGCGCCTCGACAAGGTCACGGTCAGGCGCGACGGGGTTGACCTGTTGCGGG
ACGTGAGCTGGGTGGTGAACCAGGGCGAGCGCTGGGTGGTGCTCGGGCCGAACGGCGCGGGCAAGACCACCCTGCTGCAG
ATCGCCTCCTCCCGCCTGTTCCCCACCGCCGGCGCGGTCGATCTTCTCGGCGCGCGCCTGGGCCGGGTGAACCTGCATGA
CCTGCGTTACCGGGTCGGCGTCGTCAGTCCGGTGCTCACCGACGCGCCGCCGCCCGGCGAGCGGGTCCTCGACGCCGTCG
TCACCGCCGGCTGGTCCGTGCTGGGCCGCGCCGACGAGGCGTACGACGACGTCGACCTGCGCCGTGCCGCGGACCTGCTC
GGCCAGTTCGGCTGCCGGGGCCTGGTCGAGCGCACCTTCGGCACGCTGTCGGAGGGGGAGCGTAAGCGGGTCCAGATCGC
CCGGGCGCTGATGACCGACCCCGAGCTCCTGCTGCTGGACGAGCCGGCCGGCGGGTTGGACCTCGGCGCGCGGGAGGCCC
TGCTGCGGCTGCTGACCCGGTTCGCAGCCGATCCGGTCGCCCCGGTCACCGTGCTGGTCAGCCATCACGTCGAGGAGATC
CCGGTCGGCGTGACGCACGCGCTTCTGCTGCGCCGCGGCCAGGTACTCGCCGCCGGGCCGGTGGCGGAGGTCATGCTCTC
CGAACGGCTCTCGGCCTGTTTCGGGATTCCGCTGGAGATAACGTCCTCGGCGGGCCGGTACGCGGCCCGCCTGGCGGCTC
CGGCCCCCCGGCCGCGCCCGCCGGCTCCGGCGCCGGCCTGA

Upstream 100 bases:

>100_bases
GGGTCTGACGTCCAGCCGGGCTGGGCGCGGGGCCTGGCGCCCAGCCCGGCTGGACGACCTGAGAGGGATCGTCGCCCAAC
GGGCGGCGGAGCCGTGCCCG

Downstream 100 bases:

>100_bases
GCGCTCCACGATGACCGACCCGGCGCTGACCCCGAGCGCTTCAGGGCTGATCTGAACGGTCCGCAGAACTGACCGGAACG
GTCCGTGAGACGGGCCTGAG

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MGVLRWGRGGAFAPAGPPASGRGRVSRNVSAMPDAVLRLDKVTVRRDGVDLLRDVSWVVNQGERWVVLGPNGAGKTTLLQ
IASSRLFPTAGAVDLLGARLGRVNLHDLRYRVGVVSPVLTDAPPPGERVLDAVVTAGWSVLGRADEAYDDVDLRRAADLL
GQFGCRGLVERTFGTLSEGERKRVQIARALMTDPELLLLDEPAGGLDLGAREALLRLLTRFAADPVAPVTVLVSHHVEEI
PVGVTHALLLRRGQVLAAGPVAEVMLSERLSACFGIPLEITSSAGRYAARLAAPAPRPRPPAPAPA

Sequences:

>Translated_306_residues
MGVLRWGRGGAFAPAGPPASGRGRVSRNVSAMPDAVLRLDKVTVRRDGVDLLRDVSWVVNQGERWVVLGPNGAGKTTLLQ
IASSRLFPTAGAVDLLGARLGRVNLHDLRYRVGVVSPVLTDAPPPGERVLDAVVTAGWSVLGRADEAYDDVDLRRAADLL
GQFGCRGLVERTFGTLSEGERKRVQIARALMTDPELLLLDEPAGGLDLGAREALLRLLTRFAADPVAPVTVLVSHHVEEI
PVGVTHALLLRRGQVLAAGPVAEVMLSERLSACFGIPLEITSSAGRYAARLAAPAPRPRPPAPAPA
>Mature_305_residues
GVLRWGRGGAFAPAGPPASGRGRVSRNVSAMPDAVLRLDKVTVRRDGVDLLRDVSWVVNQGERWVVLGPNGAGKTTLLQI
ASSRLFPTAGAVDLLGARLGRVNLHDLRYRVGVVSPVLTDAPPPGERVLDAVVTAGWSVLGRADEAYDDVDLRRAADLLG
QFGCRGLVERTFGTLSEGERKRVQIARALMTDPELLLLDEPAGGLDLGAREALLRLLTRFAADPVAPVTVLVSHHVEEIP
VGVTHALLLRRGQVLAAGPVAEVMLSERLSACFGIPLEITSSAGRYAARLAAPAPRPRPPAPAPA

Specific function: Involved In The Transport Of Molybdenum Into The Cell. Involved In Photorepair. Could Act On Uv-Induced DNA Damage Other Than Pyrimidine Dimers. [C]

COG id: COG1119

COG function: function code P; ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI9955963, Length=219, Percent_Identity=29.2237442922374, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI255708477, Length=228, Percent_Identity=26.3157894736842, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI42741659, Length=201, Percent_Identity=28.3582089552239, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI27262624, Length=251, Percent_Identity=24.3027888446215, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI27262626, Length=251, Percent_Identity=24.3027888446215, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI21536378, Length=221, Percent_Identity=29.4117647058824, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI153792144, Length=188, Percent_Identity=28.1914893617021, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI11967969, Length=182, Percent_Identity=30.7692307692308, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI1786975, Length=205, Percent_Identity=32.1951219512195, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1786319, Length=232, Percent_Identity=30.6034482758621, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1786563, Length=222, Percent_Identity=31.981981981982, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787792, Length=267, Percent_Identity=26.9662921348315, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1787089, Length=247, Percent_Identity=27.5303643724696, Blast_Score=81, Evalue=9e-17,
Organism=Escherichia coli, GI1786345, Length=255, Percent_Identity=27.843137254902, Blast_Score=81, Evalue=9e-17,
Organism=Escherichia coli, GI1786803, Length=247, Percent_Identity=24.6963562753036, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1788761, Length=210, Percent_Identity=30.952380952381, Blast_Score=78, Evalue=8e-16,
Organism=Escherichia coli, GI1790190, Length=202, Percent_Identity=30.6930693069307, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1789593, Length=224, Percent_Identity=29.0178571428571, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1790739, Length=251, Percent_Identity=28.2868525896414, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1789032, Length=217, Percent_Identity=27.6497695852535, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788450, Length=213, Percent_Identity=29.1079812206573, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787112, Length=275, Percent_Identity=29.0909090909091, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI48994997, Length=213, Percent_Identity=29.5774647887324, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786698, Length=208, Percent_Identity=25.9615384615385, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787029, Length=190, Percent_Identity=27.8947368421053, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI87082268, Length=185, Percent_Identity=31.8918918918919, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1788165, Length=241, Percent_Identity=26.9709543568465, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI87081709, Length=226, Percent_Identity=25.2212389380531, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1788506, Length=226, Percent_Identity=26.9911504424779, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1789873, Length=185, Percent_Identity=30.2702702702703, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1788897, Length=214, Percent_Identity=28.5046728971963, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787547, Length=239, Percent_Identity=22.5941422594142, Blast_Score=61, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI193202349, Length=226, Percent_Identity=27.8761061946903, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI25146777, Length=229, Percent_Identity=29.2576419213974, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17558664, Length=245, Percent_Identity=27.7551020408163, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71992285, Length=250, Percent_Identity=24.8, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115535101, Length=177, Percent_Identity=28.8135593220339, Blast_Score=65, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=212, Percent_Identity=29.7169811320755, Blast_Score=69, Evalue=9e-13,
Organism=Saccharomyces cerevisiae, GI6321121, Length=211, Percent_Identity=30.8056872037915, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI85726357, Length=226, Percent_Identity=27.8761061946903, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI281362751, Length=249, Percent_Identity=28.5140562248996, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21357907, Length=232, Percent_Identity=30.6034482758621, Blast_Score=71, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24650853, Length=249, Percent_Identity=28.5140562248996, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24650855, Length=249, Percent_Identity=28.5140562248996, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24666836, Length=207, Percent_Identity=31.4009661835749, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI161077321, Length=270, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI281363262, Length=238, Percent_Identity=29.4117647058824, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24653245, Length=238, Percent_Identity=29.4117647058824, Blast_Score=68, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 32408; Mature: 32277

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVLRWGRGGAFAPAGPPASGRGRVSRNVSAMPDAVLRLDKVTVRRDGVDLLRDVSWVVN
CCCEEECCCCCCCCCCCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHC
QGERWVVLGPNGAGKTTLLQIASSRLFPTAGAVDLLGARLGRVNLHDLRYRVGVVSPVLT
CCCEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
DAPPPGERVLDAVVTAGWSVLGRADEAYDDVDLRRAADLLGQFGCRGLVERTFGTLSEGE
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
RKRVQIARALMTDPELLLLDEPAGGLDLGAREALLRLLTRFAADPVAPVTVLVSHHVEEI
HHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
PVGVTHALLLRRGQVLAAGPVAEVMLSERLSACFGIPLEITSSAGRYAARLAAPAPRPRP
CCHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHCCCCCCCCC
PAPAPA
CCCCCC
>Mature Secondary Structure 
GVLRWGRGGAFAPAGPPASGRGRVSRNVSAMPDAVLRLDKVTVRRDGVDLLRDVSWVVN
CCEEECCCCCCCCCCCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHC
QGERWVVLGPNGAGKTTLLQIASSRLFPTAGAVDLLGARLGRVNLHDLRYRVGVVSPVLT
CCCEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
DAPPPGERVLDAVVTAGWSVLGRADEAYDDVDLRRAADLLGQFGCRGLVERTFGTLSEGE
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
RKRVQIARALMTDPELLLLDEPAGGLDLGAREALLRLLTRFAADPVAPVTVLVSHHVEEI
HHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
PVGVTHALLLRRGQVLAAGPVAEVMLSERLSACFGIPLEITSSAGRYAARLAAPAPRPRP
CCHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHCCCCCCCCC
PAPAPA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]