Click here to switch to the map view.

The map label for this gene is recA [H]

Identifier: 158313071

GI number: 158313071

Start: 1458291

End: 1459334

Strand: Direct

Name: recA [H]

Synonym: Franean1_1219

Alternate gene names: 158313071

Gene position: 1458291-1459334 (Clockwise)

Preceding gene: 158313070

Following gene: 158313072

Centisome position: 16.24

GC content: 66.28

Gene sequence:

>1044_bases
ATGGCAGGACCCGACCGCGACAAGGCGTTGGAGAACGCTCTTGCGCAGATCGACAAGCAGTTCGGCAAGGGCTCGGTCAT
GCGGCTGGGTGACGACACCCGCCCGCCGATCCAGGCCATCCCGACCGGATCCATCGCCCTGGATGTCGCGCTCGGTATCG
GGGGCCTCCCTCGCGGGCGCGTCGTCGAGATCTATGGGCCGGAGTCGTCCGGAAAAACCACGGTCGCGTTGCACGCGGTG
GCGAACGCGCAGGCAGCCGGAGGTATTGCGGCCTTCATCGACGCCGAGCACGCACTTGATCCGGAGTATGCGGGGAAGCT
CGGCGTCGACACCGACGCGCTGCTCGTCTCCCAGCCCGACACGGGGGAGCAGGCGCTGGAGATCGCCGACATGCTGATCC
GTTCCGGCGCGCTGGACGTCATCGTCATCGACTCGGTCGCGGCGCTGGTACCGCGGGCCGAGATCGAGGGGGAGATGGGC
GACAGCCACGTGGGTCTGCAGGCCCGCCTGATGTCGCAGGCACTGCGGAAGATCACCGGGGCGCTCGCGAACTCCGGCAC
CACCGCCATCTTCATCAACCAGCTCCGCGAGAAGGTCGGCGTCATGTTCGGCTCTCCGGAGACCACCACCGGTGGAAAGG
CGTTGAAGTTCTACGCCTCCGTCCGGCTCGACGTACGCCGCATCGAGACGCTGAAGGACGGCACCGAGGCGGTCGGTAAC
CGGACCAGGGTCAAGGTGGTCAAGAACAAGATGGCCCCGCCGTTCCGGACAGCCGAGTTCGACATCGTCTACGGCGGCGG
TATCAGCCGCGAGGGCTCCCTGATCGATATGGGCGTCGAGCACGGCATCATCCGCAAGTCCGGTGCCTGGTACACCTATG
ACGGTGACCAGCTCGGCCAGGGCAAGGAAAATGCACGGTCATTCCTCCGCGATAACCCGGATCTGGCCAACGAGATCGAA
AAGCGGATCAAGGAGAAGCTCGGCCTCTCCCCGACGCTGGACGCTGACGCCGACGCTCCCGCCCCGGTTCCGGTGGACCT
CTGA

Upstream 100 bases:

>100_bases
AGTTGTCCACAGAGGCCACCCGGCTATCGAAACTGTCGGACCCACCCCCTAGCGTCGGATCGTGGCCAAGACTCGACGAC
CTCAGCCAGGAGTAACTCCA

Downstream 100 bases:

>100_bases
CCGGGCGAGCGGCGTCCCGGCAGGAGCCGTTCCCGGCGGCTGAGCCATGGGGGACCATGACGGGCTGGCCCGCGGCCGGT
GAGGAGTCCGACGGGCCGGG

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MAGPDRDKALENALAQIDKQFGKGSVMRLGDDTRPPIQAIPTGSIALDVALGIGGLPRGRVVEIYGPESSGKTTVALHAV
ANAQAAGGIAAFIDAEHALDPEYAGKLGVDTDALLVSQPDTGEQALEIADMLIRSGALDVIVIDSVAALVPRAEIEGEMG
DSHVGLQARLMSQALRKITGALANSGTTAIFINQLREKVGVMFGSPETTTGGKALKFYASVRLDVRRIETLKDGTEAVGN
RTRVKVVKNKMAPPFRTAEFDIVYGGGISREGSLIDMGVEHGIIRKSGAWYTYDGDQLGQGKENARSFLRDNPDLANEIE
KRIKEKLGLSPTLDADADAPAPVPVDL

Sequences:

>Translated_347_residues
MAGPDRDKALENALAQIDKQFGKGSVMRLGDDTRPPIQAIPTGSIALDVALGIGGLPRGRVVEIYGPESSGKTTVALHAV
ANAQAAGGIAAFIDAEHALDPEYAGKLGVDTDALLVSQPDTGEQALEIADMLIRSGALDVIVIDSVAALVPRAEIEGEMG
DSHVGLQARLMSQALRKITGALANSGTTAIFINQLREKVGVMFGSPETTTGGKALKFYASVRLDVRRIETLKDGTEAVGN
RTRVKVVKNKMAPPFRTAEFDIVYGGGISREGSLIDMGVEHGIIRKSGAWYTYDGDQLGQGKENARSFLRDNPDLANEIE
KRIKEKLGLSPTLDADADAPAPVPVDL
>Mature_346_residues
AGPDRDKALENALAQIDKQFGKGSVMRLGDDTRPPIQAIPTGSIALDVALGIGGLPRGRVVEIYGPESSGKTTVALHAVA
NAQAAGGIAAFIDAEHALDPEYAGKLGVDTDALLVSQPDTGEQALEIADMLIRSGALDVIVIDSVAALVPRAEIEGEMGD
SHVGLQARLMSQALRKITGALANSGTTAIFINQLREKVGVMFGSPETTTGGKALKFYASVRLDVRRIETLKDGTEAVGNR
TRVKVVKNKMAPPFRTAEFDIVYGGGISREGSLIDMGVEHGIIRKSGAWYTYDGDQLGQGKENARSFLRDNPDLANEIEK
RIKEKLGLSPTLDADADAPAPVPVDL

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=332, Percent_Identity=64.7590361445783, Blast_Score=447, Evalue=1e-127,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 36665; Mature: 36534

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGPDRDKALENALAQIDKQFGKGSVMRLGDDTRPPIQAIPTGSIALDVALGIGGLPRGR
CCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEECCCCCEEEEEEECCCCCCCCC
VVEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAGKLGVDTDALLVSQPD
EEEEECCCCCCCEEEEEEEECCCCCCCCEEEEECCHHCCCHHHCCCCCCCCCEEEEECCC
TGEQALEIADMLIRSGALDVIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITG
CCHHHHHHHHHHHHCCCCEEEEHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
ALANSGTTAIFINQLREKVGVMFGSPETTTGGKALKFYASVRLDVRRIETLKDGTEAVGN
HHHCCCCHHHHHHHHHHHHCEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCC
RTRVKVVKNKMAPPFRTAEFDIVYGGGISREGSLIDMGVEHGIIRKSGAWYTYDGDQLGQ
CCEEEEEHHCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCEECCCCEEEECCHHHCC
GKENARSFLRDNPDLANEIEKRIKEKLGLSPTLDADADAPAPVPVDL
CHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGPDRDKALENALAQIDKQFGKGSVMRLGDDTRPPIQAIPTGSIALDVALGIGGLPRGR
CCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEECCCCCEEEEEEECCCCCCCCC
VVEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAGKLGVDTDALLVSQPD
EEEEECCCCCCCEEEEEEEECCCCCCCCEEEEECCHHCCCHHHCCCCCCCCCEEEEECCC
TGEQALEIADMLIRSGALDVIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITG
CCHHHHHHHHHHHHCCCCEEEEHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
ALANSGTTAIFINQLREKVGVMFGSPETTTGGKALKFYASVRLDVRRIETLKDGTEAVGN
HHHCCCCHHHHHHHHHHHHCEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCC
RTRVKVVKNKMAPPFRTAEFDIVYGGGISREGSLIDMGVEHGIIRKSGAWYTYDGDQLGQ
CCEEEEEHHCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCEECCCCEEEECCHHHCC
GKENARSFLRDNPDLANEIEKRIKEKLGLSPTLDADADAPAPVPVDL
CHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA