| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is ftpA [H]
Identifier: 158313061
GI number: 158313061
Start: 1444935
End: 1445402
Strand: Direct
Name: ftpA [H]
Synonym: Franean1_1209
Alternate gene names: 158313061
Gene position: 1444935-1445402 (Clockwise)
Preceding gene: 158313060
Following gene: 158313062
Centisome position: 16.09
GC content: 67.52
Gene sequence:
>468_bases ATGAGCGCCATCCGCAGTCCGCTGTCAGACGAGGCGCGCACGGTCACCGGCGAGGCTCTCCAGGGCGCCGTCGTCGACCT GGTCGATCTGTCGCTGTTGGGTAAGCAGCTCCACTGGAACGTGATCGGCCGCAACTTCCGCACGGTGCACCGCCAGCTCG ACGCCGTGGTCGACCTGGCCCGGCGCTACACCGACATGTGTGCCGAACGCGCCGCGGCGATCGGGGTGAACCCCGACGGC CAGGCCAGCACCGTGGCCCGCAGCAGTCACCTGCACGGCGTCGAGCCCGGCTACATCGGTGACGAGAAGGCGATCCGGCT GATCACGGACGTCCTCGCCGGGATGATCACCAGGATGCGTACCCGGATGGACCTCACCGCCCAGCCGGATCCGGTGACCC AGGACCTGTTCATCGATGTGGTCCGCGACCTCGAGGAACAGCACTGGATGTTCCAGGCGATGGTCTAG
Upstream 100 bases:
>100_bases CGGTCGGTTCTGCCTCGCAGGCTGAGCCTGGCCGGCGTACGGATCTTCTCTGCGGGCACGCCTTTCGCGGACGTGCCCGA GCTCCAGAGAGAGGATCATT
Downstream 100 bases:
>100_bases GTACCCGGCCCGCCTCGACCCGGGCCCGGCCATGCTCCGGACTGTCGCCTCGGTGTGCCGCCGCGCGGGCCGGGGCGGCG GGCCGTCCCGGGTGGTTCCG
Product: Ferritin Dps family protein
Products: NA
Alternate protein names: 24 kDa surface protein [H]
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MSAIRSPLSDEARTVTGEALQGAVVDLVDLSLLGKQLHWNVIGRNFRTVHRQLDAVVDLARRYTDMCAERAAAIGVNPDG QASTVARSSHLHGVEPGYIGDEKAIRLITDVLAGMITRMRTRMDLTAQPDPVTQDLFIDVVRDLEEQHWMFQAMV
Sequences:
>Translated_155_residues MSAIRSPLSDEARTVTGEALQGAVVDLVDLSLLGKQLHWNVIGRNFRTVHRQLDAVVDLARRYTDMCAERAAAIGVNPDG QASTVARSSHLHGVEPGYIGDEKAIRLITDVLAGMITRMRTRMDLTAQPDPVTQDLFIDVVRDLEEQHWMFQAMV >Mature_154_residues SAIRSPLSDEARTVTGEALQGAVVDLVDLSLLGKQLHWNVIGRNFRTVHRQLDAVVDLARRYTDMCAERAAAIGVNPDGQ ASTVARSSHLHGVEPGYIGDEKAIRLITDVLAGMITRMRTRMDLTAQPDPVTQDLFIDVVRDLEEQHWMFQAMV
Specific function: May contribute to bacterial adherence, or be involved in the protection of the bacteria, or both [H]
COG id: COG0783
COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)
Gene ontology:
Cell location: Fimbrium [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dps family [H]
Homologues:
None
Paralogues:
None
Copy number: 6720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002177 - InterPro: IPR023188 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 17194; Mature: 17063
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS00818 DPS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIRSPLSDEARTVTGEALQGAVVDLVDLSLLGKQLHWNVIGRNFRTVHRQLDAVVDLA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRYTDMCAERAAAIGVNPDGQASTVARSSHLHGVEPGYIGDEKAIRLITDVLAGMITRMR HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH TRMDLTAQPDPVTQDLFIDVVRDLEEQHWMFQAMV HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SAIRSPLSDEARTVTGEALQGAVVDLVDLSLLGKQLHWNVIGRNFRTVHRQLDAVVDLA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRYTDMCAERAAAIGVNPDGQASTVARSSHLHGVEPGYIGDEKAIRLITDVLAGMITRMR HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH TRMDLTAQPDPVTQDLFIDVVRDLEEQHWMFQAMV HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8550517; 7650727 [H]