Click here to switch to the map view.

The map label for this gene is ribF [H]

Identifier: 158313039

GI number: 158313039

Start: 1411832

End: 1412761

Strand: Direct

Name: ribF [H]

Synonym: Franean1_1187

Alternate gene names: 158313039

Gene position: 1411832-1412761 (Clockwise)

Preceding gene: 158313038

Following gene: 158313040

Centisome position: 15.72

GC content: 73.76

Gene sequence:

>930_bases
GTGCGACGTTGGCGCGGAGTGGAGAACATCCCGGACGACTGGCCGGGAGGAATCATCACCATTGGCTTCTTCGACGGCGT
CCACCTCGGGCACCGGCGGATCATCGGCCGGGCGGTGGAGCTGGCGCGCGAGCGCGGGCAGCAGGCGGCCGTGGTGACGT
TCGACCCGCACCCGGCGGAGGTCCTGCGCCCCGGCACCCATCCCGCGCTGCTGACGACCCTGCGGCACAAGGCCGAGCTG
CTCGAGGCCGTCGGCGTCGACGCGCTGTGCGTCGCCCCGTTCACCCTCGACTTCAGCCGGATGACCGCCGAGGACTTCGT
CCACGAGATCGTCGCCGGGCAGCTGCGCGCGACCGGCGTGGTCGTGGGGGAGAACTTCACCTACGGCCACCGCGCCCTGG
GGAACGTGGAGACGCTGGCCCGCGGCGGCCGTTCCGAGGGCTTCACCGTGGAGGGGATCGGCCTCGTCCACGCGGACGAG
CAGGTGCTCTCCTCGACGGCGATCCGCCGGCGGGTGGCCGACGGCGACGTCGAGGGCGCCGCGGCGGCCCTCGGCCGGCC
GCACCGGGTCGAGGGCGTGGTGGTGCACGGGGACGCGCGTGGCCGGCTGATCGGCTACCCGACGGCGAACCTGCAGTGCA
CGCCGTGGGCGGCGGTTCCCGGCGACGGGGTGTACGCGGGCTTCGCGCGGTGGTCCGGCCAGCGGCGGGCGGCCGCGATC
TCGATCGGCACCAACCCGACCTTCGAGGGCCGCGACCGCCGGGTCGAGGCGTTCCTGCTCGACTTCGACGGCGACCTCTA
CGGCGAGTACATGGTCTACGAGTTCACCCACCGGCTGCGCCCGACGCTGCGCTTCGACTCGGTCGACGAGCTCGTCCTGC
AGATGGCGCGGGACGTCGACGCCACCCGCGCGGCCACGCTCCCCGTCTGA

Upstream 100 bases:

>100_bases
GCATCAGGCGCGGGTCCGTCGACGGCGCCCGGATCGGCCGCCGTCGTGGCCGCCCGGATCGCGATCGTAGATCGACTCGT
GATGCCCTAGGCTTCGGCAG

Downstream 100 bases:

>100_bases
CACAACGCGTCCGCGCCGGGGCGGGTCTCCCGGGGTTGATAAGCTTCCCCTTCAAGCGGGAGCGGTGTGTCCGGTGACGG
CGTGCCGGTGGTTGGCTCGT

Product: bifunctional riboflavin kinase/FMN adenylyltransferase

Products: NA

Alternate protein names: Riboflavin kinase; Flavokinase; FMN adenylyltransferase; FAD pyrophosphorylase; FAD synthase [H]

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MRRWRGVENIPDDWPGGIITIGFFDGVHLGHRRIIGRAVELARERGQQAAVVTFDPHPAEVLRPGTHPALLTTLRHKAEL
LEAVGVDALCVAPFTLDFSRMTAEDFVHEIVAGQLRATGVVVGENFTYGHRALGNVETLARGGRSEGFTVEGIGLVHADE
QVLSSTAIRRRVADGDVEGAAAALGRPHRVEGVVVHGDARGRLIGYPTANLQCTPWAAVPGDGVYAGFARWSGQRRAAAI
SIGTNPTFEGRDRRVEAFLLDFDGDLYGEYMVYEFTHRLRPTLRFDSVDELVLQMARDVDATRAATLPV

Sequences:

>Translated_309_residues
MRRWRGVENIPDDWPGGIITIGFFDGVHLGHRRIIGRAVELARERGQQAAVVTFDPHPAEVLRPGTHPALLTTLRHKAEL
LEAVGVDALCVAPFTLDFSRMTAEDFVHEIVAGQLRATGVVVGENFTYGHRALGNVETLARGGRSEGFTVEGIGLVHADE
QVLSSTAIRRRVADGDVEGAAAALGRPHRVEGVVVHGDARGRLIGYPTANLQCTPWAAVPGDGVYAGFARWSGQRRAAAI
SIGTNPTFEGRDRRVEAFLLDFDGDLYGEYMVYEFTHRLRPTLRFDSVDELVLQMARDVDATRAATLPV
>Mature_309_residues
MRRWRGVENIPDDWPGGIITIGFFDGVHLGHRRIIGRAVELARERGQQAAVVTFDPHPAEVLRPGTHPALLTTLRHKAEL
LEAVGVDALCVAPFTLDFSRMTAEDFVHEIVAGQLRATGVVVGENFTYGHRALGNVETLARGGRSEGFTVEGIGLVHADE
QVLSSTAIRRRVADGDVEGAAAALGRPHRVEGVVVHGDARGRLIGYPTANLQCTPWAAVPGDGVYAGFARWSGQRRAAAI
SIGTNPTFEGRDRRVEAFLLDFDGDLYGEYMVYEFTHRLRPTLRFDSVDELVLQMARDVDATRAATLPV

Specific function: Unknown

COG id: COG0196

COG function: function code H; FAD synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribF family [H]

Homologues:

Organism=Escherichia coli, GI1786208, Length=300, Percent_Identity=35.6666666666667, Blast_Score=172, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI17541882, Length=126, Percent_Identity=34.1269841269841, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015864
- InterPro:   IPR015865
- InterPro:   IPR002606
- InterPro:   IPR014729 [H]

Pfam domain/function: PF06574 FAD_syn; PF01687 Flavokinase [H]

EC number: =2.7.1.26; =2.7.7.2 [H]

Molecular weight: Translated: 33696; Mature: 33696

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRWRGVENIPDDWPGGIITIGFFDGVHLGHRRIIGRAVELARERGQQAAVVTFDPHPAE
CCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHH
VLRPGTHPALLTTLRHKAELLEAVGVDALCVAPFTLDFSRMTAEDFVHEIVAGQLRATGV
HCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCEEECHHHHHHHHHHHHHHHCCCEEEEE
VVGENFTYGHRALGNVETLARGGRSEGFTVEGIGLVHADEQVLSSTAIRRRVADGDVEGA
EEECCCCCCHHHHCCHHHHHCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHCCCCCCHH
AAALGRPHRVEGVVVHGDARGRLIGYPTANLQCTPWAAVPGDGVYAGFARWSGQRRAAAI
HHHCCCCCEEEEEEEECCCCCCEEECCCCCEEECCCCCCCCCCEEEHHHHCCCCCCEEEE
SIGTNPTFEGRDRRVEAFLLDFDGDLYGEYMVYEFTHRLRPTLRFDSVDELVLQMARDVD
EECCCCCCCCCCCEEEEEEEECCCCCCCCHHHEEHHHHCCCCCCCCCHHHHHHHHHHCCC
ATRAATLPV
CCCEECCCC
>Mature Secondary Structure
MRRWRGVENIPDDWPGGIITIGFFDGVHLGHRRIIGRAVELARERGQQAAVVTFDPHPAE
CCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHH
VLRPGTHPALLTTLRHKAELLEAVGVDALCVAPFTLDFSRMTAEDFVHEIVAGQLRATGV
HCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCEEECHHHHHHHHHHHHHHHCCCEEEEE
VVGENFTYGHRALGNVETLARGGRSEGFTVEGIGLVHADEQVLSSTAIRRRVADGDVEGA
EEECCCCCCHHHHCCHHHHHCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHCCCCCCHH
AAALGRPHRVEGVVVHGDARGRLIGYPTANLQCTPWAAVPGDGVYAGFARWSGQRRAAAI
HHHCCCCCEEEEEEEECCCCCCEEECCCCCEEECCCCCCCCCCEEEHHHHCCCCCCEEEE
SIGTNPTFEGRDRRVEAFLLDFDGDLYGEYMVYEFTHRLRPTLRFDSVDELVLQMARDVD
EECCCCCCCCCCCEEEEEEEECCCCCCCCHHHEEHHHHCCCCCCCCCHHHHHHHHHHCCC
ATRAATLPV
CCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7772835; 3023344 [H]