| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313019
Identifier: 158313019
GI number: 158313019
Start: 1389709
End: 1391124
Strand: Direct
Name: 158313019
Synonym: Franean1_1167
Alternate gene names: NA
Gene position: 1389709-1391124 (Clockwise)
Preceding gene: 158313018
Following gene: 158313020
Centisome position: 15.47
GC content: 77.4
Gene sequence:
>1416_bases GTGGCCACCGGGAACTCCGCCGGTCGTCGGCGTAGCCACGGCCGGGCCGGGGCCGGCTCCGCGCGGTTGGGGGCCGCCCG GCAGGGGCTGGCCCGGTCGAGCGCGCTGCGGCACGGGTCGCGTCCGGCGAACACACTGTGGCTGCCGCTCACCGCGGCGG CGGGGGTGCTCCTGCTCCTGGTCTGGTACGCGATGTCGCAGGATCCCGGGGAGGAGACCGGTTCCTCGTCCCCGGTCGCG TCCGCGCTGGGCGGAGCGGGCGGTGCCTCCGGCGGGCCCGCCGCCGTGGCGGCACCGACCGTCCCGCCGCCACCGCGCAG CGGCTGCGAGACCGGCAGCAGCCTGCCGGCGGGCGTCACCACCGAGACCATCCACATCGGCGACGTCGACCGGCAGTTCC TGCTGGCCGTCCCGCAGGGCGGCGGGGCGGGTACCGCACTGCCGCTGGTGCTGAACCTGCACGGTTACGGGCAGCCCGCA CAGGAGCTCGAGCAGTACACCCAGATGGCGGACAGCGGCACCCGGGCCGGCTACGCCGTCGCCACCCCGGTCGGGGCGTC GAACCGGTGGAACTTCACCCGCTCGGCCAAGGTGGGCCCGGATGACGTTCTCTTCGTCGGCGCGCTGCTCAACGACCTGA CCGGCCGGATGTGCCTAGACCCGAAGCGGGTGTTCGCCAGCGGCTTCTCCGACGGCGCCGACATGGTCCTCGCGCTGGCC TGCGCGCTGCCCGAGCGCTTCGCGGCGGTGGTCACGGTCGCGTCGAGCCGCTTGCCGGATGCCTGCGCCGCGCCACGGGC CAGCCTGCTCGAGCTGCACGGCACCGACGATCGGATCGCGCCGTTCAACGGCGGGGGCCAGGCCCGCACCGCCCCCTACA ACGGGCTCGTCGCCCAACCGGTGGAGGCCCGCACCGACAGGTACGCGCGCGCCCTCGGCTGCGGCGGCGAGCACTCGACG GCGCAGGACTTCACCCACGTCGCGCGGACGACCTGGACGACCTGCCCGGCCGGCAAGGACGTCGGCGCCCTGGCGATGCA GGGCGGCGGGCACACCTGGCCGGGCGCGGCACCACGGCCCGAGCTGGGTGGCACGGTGACAAACCTGAGCGCGACCGTCG TGGCGCTGGCCTTCTTCAGCGGCCACCCTGCCGACGGCCGGACGGTGACCGGCAGCGGCAGCTCCGGAGGCGGCGCGCCC GCGACGGGCGGCGCGGCCACGGGCGGCGCCACCGCGCCGACCCAGCCGCCGGCGGGGGCACCCGCGACCACCCCGCCCGC CTCGGCGGCACCCGGTGACCAGCCCGAGCCCACACCGACCGGGGCGAGCGACGATCCCGACCCGGCGCCGTCGGCGCCGC CCGGCCCGTCCACGAGCGCGACGCCGACCGGTGAGGCGCCCGCGGGCGCCGGGTAG
Upstream 100 bases:
>100_bases TGGCGGCCACCGTCCGGGACACCCGGGGCCGGGAGATCGCCGCGGCCTGCGGGCAACTCGCCGCGGAGCCGCCCGTGCGC TCGAGGGCGGGTCGGTAGTC
Downstream 100 bases:
>100_bases TGGCACGGACGGGCACGTCGCTTCTGGTGATGCCTCGTCGGGCGGCGGGCAGGGGCACGGACGGGCACGTCGCTCCTCGT GACGTTCCGCGGGCGCCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: Polyhydroxybutyrate Depolymerase; Phospholipase/Carboxylesterase; Lipoprotein; Lipoprotein LpqP; Esterase/Lipase/Thioesterase; Hydrolase; Secreted Hydrolase; Esterase Lipoprotein LpqC; Secreted Esterase; Esterase; Cellulase; Esterase Lipoprotein; Phospholipase/Carboxylesterase Family Protein; Feruloyl Esterase; Poly(3-Hydroxybutyrate) Depolymerase; Secreted Protein; Poly(3-Hydroxyalkanoate) Depolymerase; Carbohydrate Esterase Family 1 Protein; Phospholipase/Carboxylesterase Superfamily
Number of amino acids: Translated: 471; Mature: 470
Protein sequence:
>471_residues MATGNSAGRRRSHGRAGAGSARLGAARQGLARSSALRHGSRPANTLWLPLTAAAGVLLLLVWYAMSQDPGEETGSSSPVA SALGGAGGASGGPAAVAAPTVPPPPRSGCETGSSLPAGVTTETIHIGDVDRQFLLAVPQGGGAGTALPLVLNLHGYGQPA QELEQYTQMADSGTRAGYAVATPVGASNRWNFTRSAKVGPDDVLFVGALLNDLTGRMCLDPKRVFASGFSDGADMVLALA CALPERFAAVVTVASSRLPDACAAPRASLLELHGTDDRIAPFNGGGQARTAPYNGLVAQPVEARTDRYARALGCGGEHST AQDFTHVARTTWTTCPAGKDVGALAMQGGGHTWPGAAPRPELGGTVTNLSATVVALAFFSGHPADGRTVTGSGSSGGGAP ATGGAATGGATAPTQPPAGAPATTPPASAAPGDQPEPTPTGASDDPDPAPSAPPGPSTSATPTGEAPAGAG
Sequences:
>Translated_471_residues MATGNSAGRRRSHGRAGAGSARLGAARQGLARSSALRHGSRPANTLWLPLTAAAGVLLLLVWYAMSQDPGEETGSSSPVA SALGGAGGASGGPAAVAAPTVPPPPRSGCETGSSLPAGVTTETIHIGDVDRQFLLAVPQGGGAGTALPLVLNLHGYGQPA QELEQYTQMADSGTRAGYAVATPVGASNRWNFTRSAKVGPDDVLFVGALLNDLTGRMCLDPKRVFASGFSDGADMVLALA CALPERFAAVVTVASSRLPDACAAPRASLLELHGTDDRIAPFNGGGQARTAPYNGLVAQPVEARTDRYARALGCGGEHST AQDFTHVARTTWTTCPAGKDVGALAMQGGGHTWPGAAPRPELGGTVTNLSATVVALAFFSGHPADGRTVTGSGSSGGGAP ATGGAATGGATAPTQPPAGAPATTPPASAAPGDQPEPTPTGASDDPDPAPSAPPGPSTSATPTGEAPAGAG >Mature_470_residues ATGNSAGRRRSHGRAGAGSARLGAARQGLARSSALRHGSRPANTLWLPLTAAAGVLLLLVWYAMSQDPGEETGSSSPVAS ALGGAGGASGGPAAVAAPTVPPPPRSGCETGSSLPAGVTTETIHIGDVDRQFLLAVPQGGGAGTALPLVLNLHGYGQPAQ ELEQYTQMADSGTRAGYAVATPVGASNRWNFTRSAKVGPDDVLFVGALLNDLTGRMCLDPKRVFASGFSDGADMVLALAC ALPERFAAVVTVASSRLPDACAAPRASLLELHGTDDRIAPFNGGGQARTAPYNGLVAQPVEARTDRYARALGCGGEHSTA QDFTHVARTTWTTCPAGKDVGALAMQGGGHTWPGAAPRPELGGTVTNLSATVVALAFFSGHPADGRTVTGSGSSGGGAPA TGGAATGGATAPTQPPAGAPATTPPASAAPGDQPEPTPTGASDDPDPAPSAPPGPSTSATPTGEAPAGAG
Specific function: Unknown
COG id: COG3509
COG function: function code Q; Poly(3-hydroxybutyrate) depolymerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46369; Mature: 46238
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATGNSAGRRRSHGRAGAGSARLGAARQGLARSSALRHGSRPANTLWLPLTAAAGVLLLL CCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHH VWYAMSQDPGEETGSSSPVASALGGAGGASGGPAAVAAPTVPPPPRSGCETGSSLPAGVT HHHHHCCCCCHHCCCCCCHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCE TETIHIGDVDRQFLLAVPQGGGAGTALPLVLNLHGYGQPAQELEQYTQMADSGTRAGYAV EEEEEECCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEE ATPVGASNRWNFTRSAKVGPDDVLFVGALLNDLTGRMCLDPKRVFASGFSDGADMVLALA ECCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHH CALPERFAAVVTVASSRLPDACAAPRASLLELHGTDDRIAPFNGGGQARTAPYNGLVAQP HHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEECCC VEARTDRYARALGCGGEHSTAQDFTHVARTTWTTCPAGKDVGALAMQGGGHTWPGAAPRP HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCC ELGGTVTNLSATVVALAFFSGHPADGRTVTGSGSSGGGAPATGGAATGGATAPTQPPAGA CCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PATTPPASAAPGDQPEPTPTGASDDPDPAPSAPPGPSTSATPTGEAPAGAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ATGNSAGRRRSHGRAGAGSARLGAARQGLARSSALRHGSRPANTLWLPLTAAAGVLLLL CCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHH VWYAMSQDPGEETGSSSPVASALGGAGGASGGPAAVAAPTVPPPPRSGCETGSSLPAGVT HHHHHCCCCCHHCCCCCCHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCE TETIHIGDVDRQFLLAVPQGGGAGTALPLVLNLHGYGQPAQELEQYTQMADSGTRAGYAV EEEEEECCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEE ATPVGASNRWNFTRSAKVGPDDVLFVGALLNDLTGRMCLDPKRVFASGFSDGADMVLALA ECCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHH CALPERFAAVVTVASSRLPDACAAPRASLLELHGTDDRIAPFNGGGQARTAPYNGLVAQP HHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEECCC VEARTDRYARALGCGGEHSTAQDFTHVARTTWTTCPAGKDVGALAMQGGGHTWPGAAPRP HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCC ELGGTVTNLSATVVALAFFSGHPADGRTVTGSGSSGGGAPATGGAATGGATAPTQPPAGA CCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PATTPPASAAPGDQPEPTPTGASDDPDPAPSAPPGPSTSATPTGEAPAGAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA