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The map label for this gene is yifB [C]

Identifier: 158313009

GI number: 158313009

Start: 1377960

End: 1379552

Strand: Direct

Name: yifB [C]

Synonym: Franean1_1157

Alternate gene names: 158313009

Gene position: 1377960-1379552 (Clockwise)

Preceding gene: 158313008

Following gene: 158313010

Centisome position: 15.34

GC content: 76.15

Gene sequence:

>1593_bases
ATGGCGCTTGCGCGGTCGCTGGCCGTCGCGGTCGTCGGTATCGAGGGCCATCTCGTCGAGGTGGAGGCCGACCTGGCCCG
CGGCCTGCCCGGGCTGACGCTCATCGGCCTTCCGGACGCGGCACTCCACGAGGCCCGGGACCGGGTGCGGGCCGCTGTCG
TCAACTCGCGTGAGCGCTGGCCGGGCCACCGGATCACGGTCGGCCTGTTCCCGGCGACCCTGCCCAAGTCCGGCAGCGGC
TTCGACCTGGCCATGGCCGCCGCGATCCTGGGCGCCGCCGGCGTGGTCCCCGCAGCCGCCCTCGGTAGCAGGGTCCTGAT
CGGTGAGCTCGCGCTTGACGGCCGGCTTCGGCCGGTGCGCGGGGTGCTGCCAGCCGTTCTCGCTGCGGTTGAGGCCGGCC
TGGCGAACATCGTCGTGCCCGAACCCAACGCGGGCGAGGCGTCGTTGGTCCCGGGTGCGGTCGTCGAGCCCATGCCCGAC
CTCGCCAGCGTGCTCGGCCTGCTGCGCGGCCGCCCACGGCTCGGCCTGGCACGGTTCCCCGCGGCATTGGCACCGGCACG
GGTGTCGGAGCCCGCATCGGTGTCGGCATCGGCGGCGCCGCCGCCGGAGCGGGAGCCGGAGCCGATCGGGCCTGATCTCG
CGGACGTCGCCGGCCAGAGCCGGGGGCGCCTGGCCGTGGAGGTGGCCGCCGCGGGCGGACACCACCTGTTCATGCAGGGG
CCGCCCGGCTCGGGCAAGACCATGCTGGCCGAGCGGCTGCCCGGGCTGCTTCCGCCGCTGGACACCGCCGCCGCGCTGGA
GGTCACCGCCGTGCACTCGGTGGCGGGCGTTCTTCCCGTCGGCCGCCCGCTGGTCACGCGGCCTCCCTTCCGTAGCCCGC
ATCACTCCGCCACGCCGGCGGCGCTTGTCGGCTCCGGCTCCGCGGTGATCCGCCCGGGGCTGGCCAGCCAGGCGCACCAC
GGCGTCCTGTTCCTCGACGAGGCACCGGAGTTCGGCCGAACCAGCCTGGACGTGCTGCGCCAACCGCTCGAGAGCGGTGT
CATCGAGGTGGCGCGGGCCCGGGCCACCACCCGGTTCCCCGCCCGCTTCCTGCTCGTGCTGGCCGCGAACCCGTGCCCCT
GCTCGCGGGCCCGCGGCCCCCGGGACAACACCTGCGACTGCCCGAGCACGGTGCGCCGGCGCTATCTGGCGAGGCTGTCG
GGGCCGCTACTCGACCGGATCGACATCCAGGTGGCGTTGACCGCGCCGAGCCGTGCCGAGCTGCGGGCCGATCGGGGGCT
TGGCACCTCCTCGAGCGTCGTCGCCGAGCGCGTCGCTTCGGCCCGGGCCGCGATGCGGCGCCGGCTCGCCGGCACGCCGT
GGCGGCGTAACGCCGAGGTGCCCGGCCCGTCACTGCGCCGCCAGTGGCCGCTGCGGCCGGCTGCGACCCGGCTCGCCGAC
CGTGCCTTCGAGCGGGGCCTGCTCACCGCGCGTGGGCTGGATCGGGTGCTGCGCGTCGCCTGGACGGTGGCGGACCTCAA
GGGCGAGGACCGGCCGGGCCCCGACGAGATCGGGCTCGCCCTGGACCTACGCCTTCCCGGGGGATCAGCGTGA

Upstream 100 bases:

>100_bases
AGCACCCGCATCCACCGGCGATCATCCGTTTCGACGTGCTGTCGGTCTACCGGGAGCGGCAGGGGTCCGTCCGGGTGGAG
CACCGGCGGGGTGCCTTCTG

Downstream 100 bases:

>100_bases
GCGCCGGGGCGGGCGAGGTGTCGTCCCCGATTGGTGCTCCTGTGCCCGGCGGCGACGAGCCACGGCGACTTGCGCGGATC
GGGCTGAGTCGCATCGCCGG

Product: Mg chelatase subunit ChlI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 530; Mature: 529

Protein sequence:

>530_residues
MALARSLAVAVVGIEGHLVEVEADLARGLPGLTLIGLPDAALHEARDRVRAAVVNSRERWPGHRITVGLFPATLPKSGSG
FDLAMAAAILGAAGVVPAAALGSRVLIGELALDGRLRPVRGVLPAVLAAVEAGLANIVVPEPNAGEASLVPGAVVEPMPD
LASVLGLLRGRPRLGLARFPAALAPARVSEPASVSASAAPPPEREPEPIGPDLADVAGQSRGRLAVEVAAAGGHHLFMQG
PPGSGKTMLAERLPGLLPPLDTAAALEVTAVHSVAGVLPVGRPLVTRPPFRSPHHSATPAALVGSGSAVIRPGLASQAHH
GVLFLDEAPEFGRTSLDVLRQPLESGVIEVARARATTRFPARFLLVLAANPCPCSRARGPRDNTCDCPSTVRRRYLARLS
GPLLDRIDIQVALTAPSRAELRADRGLGTSSSVVAERVASARAAMRRRLAGTPWRRNAEVPGPSLRRQWPLRPAATRLAD
RAFERGLLTARGLDRVLRVAWTVADLKGEDRPGPDEIGLALDLRLPGGSA

Sequences:

>Translated_530_residues
MALARSLAVAVVGIEGHLVEVEADLARGLPGLTLIGLPDAALHEARDRVRAAVVNSRERWPGHRITVGLFPATLPKSGSG
FDLAMAAAILGAAGVVPAAALGSRVLIGELALDGRLRPVRGVLPAVLAAVEAGLANIVVPEPNAGEASLVPGAVVEPMPD
LASVLGLLRGRPRLGLARFPAALAPARVSEPASVSASAAPPPEREPEPIGPDLADVAGQSRGRLAVEVAAAGGHHLFMQG
PPGSGKTMLAERLPGLLPPLDTAAALEVTAVHSVAGVLPVGRPLVTRPPFRSPHHSATPAALVGSGSAVIRPGLASQAHH
GVLFLDEAPEFGRTSLDVLRQPLESGVIEVARARATTRFPARFLLVLAANPCPCSRARGPRDNTCDCPSTVRRRYLARLS
GPLLDRIDIQVALTAPSRAELRADRGLGTSSSVVAERVASARAAMRRRLAGTPWRRNAEVPGPSLRRQWPLRPAATRLAD
RAFERGLLTARGLDRVLRVAWTVADLKGEDRPGPDEIGLALDLRLPGGSA
>Mature_529_residues
ALARSLAVAVVGIEGHLVEVEADLARGLPGLTLIGLPDAALHEARDRVRAAVVNSRERWPGHRITVGLFPATLPKSGSGF
DLAMAAAILGAAGVVPAAALGSRVLIGELALDGRLRPVRGVLPAVLAAVEAGLANIVVPEPNAGEASLVPGAVVEPMPDL
ASVLGLLRGRPRLGLARFPAALAPARVSEPASVSASAAPPPEREPEPIGPDLADVAGQSRGRLAVEVAAAGGHHLFMQGP
PGSGKTMLAERLPGLLPPLDTAAALEVTAVHSVAGVLPVGRPLVTRPPFRSPHHSATPAALVGSGSAVIRPGLASQAHHG
VLFLDEAPEFGRTSLDVLRQPLESGVIEVARARATTRFPARFLLVLAANPCPCSRARGPRDNTCDCPSTVRRRYLARLSG
PLLDRIDIQVALTAPSRAELRADRGLGTSSSVVAERVASARAAMRRRLAGTPWRRNAEVPGPSLRRQWPLRPAATRLADR
AFERGLLTARGLDRVLRVAWTVADLKGEDRPGPDEIGLALDLRLPGGSA

Specific function: Unknown

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=510, Percent_Identity=39.2156862745098, Blast_Score=311, Evalue=4e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR008269
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C; PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 55097; Mature: 54966

Theoretical pI: Translated: 11.51; Mature: 11.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALARSLAVAVVGIEGHLVEVEADLARGLPGLTLIGLPDAALHEARDRVRAAVVNSRERW
CCCHHEEEEEEEECCCEEEEEEHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCHHHC
PGHRITVGLFPATLPKSGSGFDLAMAAAILGAAGVVPAAALGSRVLIGELALDGRLRPVR
CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHH
GVLPAVLAAVEAGLANIVVPEPNAGEASLVPGAVVEPMPDLASVLGLLRGRPRLGLARFP
HHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCHHHCC
AALAPARVSEPASVSASAAPPPEREPEPIGPDLADVAGQSRGRLAVEVAAAGGHHLFMQG
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEECCCCEEEEEC
PPGSGKTMLAERLPGLLPPLDTAAALEVTAVHSVAGVLPVGRPLVTRPPFRSPHHSATPA
CCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
ALVGSGSAVIRPGLASQAHHGVLFLDEAPEFGRTSLDVLRQPLESGVIEVARARATTRFP
EEECCCCCEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
ARFLLVLAANPCPCSRARGPRDNTCDCPSTVRRRYLARLSGPLLDRIDIQVALTAPSRAE
CEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEECCCHHH
LRADRGLGTSSSVVAERVASARAAMRRRLAGTPWRRNAEVPGPSLRRQWPLRPAATRLAD
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHH
RAFERGLLTARGLDRVLRVAWTVADLKGEDRPGPDEIGLALDLRLPGGSA
HHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure 
ALARSLAVAVVGIEGHLVEVEADLARGLPGLTLIGLPDAALHEARDRVRAAVVNSRERW
CCHHEEEEEEEECCCEEEEEEHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCHHHC
PGHRITVGLFPATLPKSGSGFDLAMAAAILGAAGVVPAAALGSRVLIGELALDGRLRPVR
CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHH
GVLPAVLAAVEAGLANIVVPEPNAGEASLVPGAVVEPMPDLASVLGLLRGRPRLGLARFP
HHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCHHHCC
AALAPARVSEPASVSASAAPPPEREPEPIGPDLADVAGQSRGRLAVEVAAAGGHHLFMQG
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEECCCCEEEEEC
PPGSGKTMLAERLPGLLPPLDTAAALEVTAVHSVAGVLPVGRPLVTRPPFRSPHHSATPA
CCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
ALVGSGSAVIRPGLASQAHHGVLFLDEAPEFGRTSLDVLRQPLESGVIEVARARATTRFP
EEECCCCCEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
ARFLLVLAANPCPCSRARGPRDNTCDCPSTVRRRYLARLSGPLLDRIDIQVALTAPSRAE
CEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEECCCHHH
LRADRGLGTSSSVVAERVASARAAMRRRLAGTPWRRNAEVPGPSLRRQWPLRPAATRLAD
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHH
RAFERGLLTARGLDRVLRVAWTVADLKGEDRPGPDEIGLALDLRLPGGSA
HHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]