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The map label for this gene is yraN [C]

Identifier: 158313008

GI number: 158313008

Start: 1377604

End: 1377960

Strand: Direct

Name: yraN [C]

Synonym: Franean1_1156

Alternate gene names: 158313008

Gene position: 1377604-1377960 (Clockwise)

Preceding gene: 158313007

Following gene: 158313009

Centisome position: 15.34

GC content: 72.27

Gene sequence:

>357_bases
ATGCGGGTCAGTCAGCGGCTCGGCAGGTTCGGTGAGGACGTCGCCGCGCGCCACCTGAGCGCCGACGGTGCGGAGATCCT
TGCCCGGAACTGGCGCTGCCGGGACGGCGAGATCGACATCGTCGCCCGCCACGGCGACACGCTCGTCTTCTGCGAGGTGA
AGACGCGCAGCGGCGCGGACTACGGGAGCGGCCCGGACGCCGTGGTCGGCCGCAAGGCGGCGAGAATCCGGCGGCTGGCC
GTGCGATGGCTGGCCGAGCACCCGCATCCACCGGCGATCATCCGTTTCGACGTGCTGTCGGTCTACCGGGAGCGGCAGGG
GTCCGTCCGGGTGGAGCACCGGCGGGGTGCCTTCTGA

Upstream 100 bases:

>100_bases
CCTCGTCCACAGGTCTCCCTTCAGCGGCCACCGGCGGCTCGCGCACGCGGAACCTGATCTCACCGGCGGGCGACCGACCC
CCGGTGGGACGGAGCCTCGG

Downstream 100 bases:

>100_bases
TGGCGCTTGCGCGGTCGCTGGCCGTCGCGGTCGTCGGTATCGAGGGCCATCTCGTCGAGGTGGAGGCCGACCTGGCCCGC
GGCCTGCCCGGGCTGACGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MRVSQRLGRFGEDVAARHLSADGAEILARNWRCRDGEIDIVARHGDTLVFCEVKTRSGADYGSGPDAVVGRKAARIRRLA
VRWLAEHPHPPAIIRFDVLSVYRERQGSVRVEHRRGAF

Sequences:

>Translated_118_residues
MRVSQRLGRFGEDVAARHLSADGAEILARNWRCRDGEIDIVARHGDTLVFCEVKTRSGADYGSGPDAVVGRKAARIRRLA
VRWLAEHPHPPAIIRFDVLSVYRERQGSVRVEHRRGAF
>Mature_118_residues
MRVSQRLGRFGEDVAARHLSADGAEILARNWRCRDGEIDIVARHGDTLVFCEVKTRSGADYGSGPDAVVGRKAARIRRLA
VRWLAEHPHPPAIIRFDVLSVYRERQGSVRVEHRRGAF

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1156_FRASN (A8L6C8)

Other databases:

- EMBL:   CP000820
- RefSeq:   YP_001505516.1
- ProteinModelPortal:   A8L6C8
- GeneID:   5669569
- GenomeReviews:   CP000820_GR
- KEGG:   fre:Franean1_1156
- HOGENOM:   HBG710155
- OMA:   VERNWRC
- ProtClustDB:   PRK12497
- BioCyc:   FSP1855:FRANEAN1_1156-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 13300; Mature: 13300

Theoretical pI: Translated: 11.13; Mature: 11.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVSQRLGRFGEDVAARHLSADGAEILARNWRCRDGEIDIVARHGDTLVFCEVKTRSGAD
CCCHHHHCCCCHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEEECCCEEEEEEEECCCCCC
YGSGPDAVVGRKAARIRRLAVRWLAEHPHPPAIIRFDVLSVYRERQGSVRVEHRRGAF
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCEEEECCCCCC
>Mature Secondary Structure
MRVSQRLGRFGEDVAARHLSADGAEILARNWRCRDGEIDIVARHGDTLVFCEVKTRSGAD
CCCHHHHCCCCHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEEECCCEEEEEEEECCCCCC
YGSGPDAVVGRKAARIRRLAVRWLAEHPHPPAIIRFDVLSVYRERQGSVRVEHRRGAF
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA