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The map label for this gene is rpmF

Identifier: 158312989

GI number: 158312989

Start: 1357914

End: 1358084

Strand: Direct

Name: rpmF

Synonym: Franean1_1137

Alternate gene names: 158312989

Gene position: 1357914-1358084 (Clockwise)

Preceding gene: 158312988

Following gene: 158312990

Centisome position: 15.12

GC content: 71.35

Gene sequence:

>171_bases
GTGGCAGTCCCGAAGCGGCGCACCTCGCGCAGCAACACCCGGTCCCGTCGGGCGCAGTGGAAGGCCAAGGCGCCGGCGCT
GGCCAAGTGCTCGCGCGGGCACACGATCCGGCCGCACACCATGTGCCCGACCTGCGGCCGTTACAACGATCGCCAGGTGC
TCGACGTCTGA

Upstream 100 bases:

>100_bases
TCGGGCCGGACCATTCCCACACCCAGCAGGACCCGAGGTGGGCGGCTCTGTCCGGCCTTGCCGAGGCCCCTGCCACCACC
GATAACAAGGAGAAGGACTA

Downstream 100 bases:

>100_bases
CCACGGTGTGGCACGTGTCGCTGTCGACCTGATCGGAGCGGGCTCCCCGCCGGGCGACCTGCTCGGCGAGATCACCGCCG
TCCTCGATGCCGATCCGCGG

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 56; Mature: 55

Protein sequence:

>56_residues
MAVPKRRTSRSNTRSRRAQWKAKAPALAKCSRGHTIRPHTMCPTCGRYNDRQVLDV

Sequences:

>Translated_56_residues
MAVPKRRTSRSNTRSRRAQWKAKAPALAKCSRGHTIRPHTMCPTCGRYNDRQVLDV
>Mature_55_residues
AVPKRRTSRSNTRSRRAQWKAKAPALAKCSRGHTIRPHTMCPTCGRYNDRQVLDV

Specific function: Unknown

COG id: COG0333

COG function: function code J; Ribosomal protein L32

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL32_FRASN (A8L591)

Other databases:

- EMBL:   CP000820
- RefSeq:   YP_001505497.1
- ProteinModelPortal:   A8L591
- SMR:   A8L591
- GeneID:   5669550
- GenomeReviews:   CP000820_GR
- KEGG:   fre:Franean1_1137
- HOGENOM:   HBG728381
- OMA:   CGRYNDR
- ProtClustDB:   PRK12286
- BioCyc:   FSP1855:FRANEAN1_1137-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00340
- InterPro:   IPR002677
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01031

Pfam domain/function: PF01783 Ribosomal_L32p; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 6423; Mature: 6291

Theoretical pI: Translated: 12.17; Mature: 12.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPKRRTSRSNTRSRRAQWKAKAPALAKCSRGHTIRPHTMCPTCGRYNDRQVLDV
CCCCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCEECCC
>Mature Secondary Structure 
AVPKRRTSRSNTRSRRAQWKAKAPALAKCSRGHTIRPHTMCPTCGRYNDRQVLDV
CCCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA