| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312855
Identifier: 158312855
GI number: 158312855
Start: 1181663
End: 1182466
Strand: Direct
Name: 158312855
Synonym: Franean1_1001
Alternate gene names: NA
Gene position: 1181663-1182466 (Clockwise)
Preceding gene: 158312854
Following gene: 158312856
Centisome position: 13.16
GC content: 69.03
Gene sequence:
>804_bases GTGACGACGACAGCGACAACCAGCTCGACCGGAAGAAATAGTGGGAAGAAGAATCGGAACACGACCGGAGAAGCGACGCC GGACTCGTCCGTCGATACGACCACAAGCACGGCGGTGGAAACGGGCCGGGGCAGGCGGGTGAATTCGGGGCAGCGGACGC CCGCGGCGCGGCTCGCCTTCGGCATCACCGAGGTCACCGCGCCCACCGTGCTCGTCACCGGGCTGCTGGCGGTGGTCGCC CAGCATGACGCGCCGGACCTCGGCCACGGCGCGCTCTGGGGTGTCATCGCCGTCCTGTTCGGAACGGCCGTCCCGATGAG TTTCGTTTTCTACGGCGTCCGCCGCCGCCGCTGGTCCGACCACCATGTGCCGGAGCGCAGCAAGCGGATGCAGCCGATGC TGTTCGGCTGCGCGTCGGTCGCCGTCGGCTATGTGCTGCTCCGCGTGACGGATGCTCCGAAGGACATCGCCACCGTGTAC GCCGCGATGATCACCGAAGCGCTCATCCTCACCGCCATCACACGGTTCTGGAAAATCAGCGGCCATGTCGCGGCCGCGGC GAGCTGTGCCACCGTCCTCACGTTCGTGTACGGGCCGGCGCTCGCCCTCACCTGGGCGGCGGTGCCCGTCATCGCCTGGG CGCGCGTCCAGACCCGGAAGGCACGGCTGGCAGAGGCCCACGCGGAGGGCTCCGCGGACGACCACGACGAGCTGGACGGC CACACCCCCGCACAGACCGTAGCCGCCGCGCTCGTAGCAGCAGCGATAGTCACCACCGCCTACGTGACAATCGGAGGCCT CTGA
Upstream 100 bases:
>100_bases GTCCATCCGTGTCTGGCCGTTCTTGCCCCGGCGCCTGGCCGCCGGCGATTTTGCCGCAATCCGTCCCGCGTCGAAAAGCA CCGACTCAGACAGGTATCCC
Downstream 100 bases:
>100_bases CGCGACCCGGATCGCGGCGAGCCGGGTGGGGGCCGCTTCGAAGCGTGTTGCGTGAGCGGCGCGTGGAGTGGCTCAGACAA CTCGCTTCGAGGGCGCTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MTTTATTSSTGRNSGKKNRNTTGEATPDSSVDTTTSTAVETGRGRRVNSGQRTPAARLAFGITEVTAPTVLVTGLLAVVA QHDAPDLGHGALWGVIAVLFGTAVPMSFVFYGVRRRRWSDHHVPERSKRMQPMLFGCASVAVGYVLLRVTDAPKDIATVY AAMITEALILTAITRFWKISGHVAAAASCATVLTFVYGPALALTWAAVPVIAWARVQTRKARLAEAHAEGSADDHDELDG HTPAQTVAAALVAAAIVTTAYVTIGGL
Sequences:
>Translated_267_residues MTTTATTSSTGRNSGKKNRNTTGEATPDSSVDTTTSTAVETGRGRRVNSGQRTPAARLAFGITEVTAPTVLVTGLLAVVA QHDAPDLGHGALWGVIAVLFGTAVPMSFVFYGVRRRRWSDHHVPERSKRMQPMLFGCASVAVGYVLLRVTDAPKDIATVY AAMITEALILTAITRFWKISGHVAAAASCATVLTFVYGPALALTWAAVPVIAWARVQTRKARLAEAHAEGSADDHDELDG HTPAQTVAAALVAAAIVTTAYVTIGGL >Mature_266_residues TTTATTSSTGRNSGKKNRNTTGEATPDSSVDTTTSTAVETGRGRRVNSGQRTPAARLAFGITEVTAPTVLVTGLLAVVAQ HDAPDLGHGALWGVIAVLFGTAVPMSFVFYGVRRRRWSDHHVPERSKRMQPMLFGCASVAVGYVLLRVTDAPKDIATVYA AMITEALILTAITRFWKISGHVAAAASCATVLTFVYGPALALTWAAVPVIAWARVQTRKARLAEAHAEGSADDHDELDGH TPAQTVAAALVAAAIVTTAYVTIGGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28009; Mature: 27878
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTATTSSTGRNSGKKNRNTTGEATPDSSVDTTTSTAVETGRGRRVNSGQRTPAARLAF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHH GITEVTAPTVLVTGLLAVVAQHDAPDLGHGALWGVIAVLFGTAVPMSFVFYGVRRRRWSD HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC HHVPERSKRMQPMLFGCASVAVGYVLLRVTDAPKDIATVYAAMITEALILTAITRFWKIS CCCCHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GHVAAAASCATVLTFVYGPALALTWAAVPVIAWARVQTRKARLAEAHAEGSADDHDELDG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCC HTPAQTVAAALVAAAIVTTAYVTIGGL CCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTTATTSSTGRNSGKKNRNTTGEATPDSSVDTTTSTAVETGRGRRVNSGQRTPAARLAF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHH GITEVTAPTVLVTGLLAVVAQHDAPDLGHGALWGVIAVLFGTAVPMSFVFYGVRRRRWSD HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC HHVPERSKRMQPMLFGCASVAVGYVLLRVTDAPKDIATVYAAMITEALILTAITRFWKIS CCCCHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GHVAAAASCATVLTFVYGPALALTWAAVPVIAWARVQTRKARLAEAHAEGSADDHDELDG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCC HTPAQTVAAALVAAAIVTTAYVTIGGL CCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA