| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312848
Identifier: 158312848
GI number: 158312848
Start: 1172888
End: 1173625
Strand: Direct
Name: 158312848
Synonym: Franean1_0994
Alternate gene names: NA
Gene position: 1172888-1173625 (Clockwise)
Preceding gene: 158312846
Following gene: 158312852
Centisome position: 13.06
GC content: 71.0
Gene sequence:
>738_bases GTGCGCGACCTGCCGTACTCCGGCTTCGGTCTCTCCCGGTCGGTCACGCTGTTCCGCGCGCACCGCAAGGAGCCGGTCGA CCCGGCCGGTTTCTACTCGCTCATCGCGGCCGACTCCGTCCGCCAGCTCCGCCGGTACACGACGCTGTCCGGCCAGCTGG TGCTGGATGTCGGCGGCGGCCCCGGTTACTTCCGGTCCGCGTTCCTCGACGCGGGCGCCAGGTACTACTGGGTCGAGCCC GACGTCTCCGAGATGGAGGCCGGTGGTCTCGATGTGCCCGGCCGGATCCGCGGGAGCGCGCTCGAGCTGCCGTTCCGGAG CGACTCGATCGACCTCTGCTACAGCTCGAACGTGCTTGAGCACGTACCCGACCCGTGGCGGATGTGCTCGGAGCTGGTGC GGGTGACCCGCCCCGGCGGGCTGATCTTCCTCAGCTACACGAACTGGCTCTCGCCGTGGGGCGGGCACGAGACGGCGCCG TGGCACTACCTCGGTGGTGACCGCGCCGCCGACCGCTTCGAGAAGCGGCAGGGCCGCCCGCCGAAGAACCGGTTCGGCCA GACGCTGTTCCCGGTGTCCGTCGCCGGCACCCTCGCCTGGGCCCGCCAGCGCTCCGACGTGGTCGTCGTCGACGCGATGC CGCGCTACCTGCCGGACTGGGCGAAGGCCATCCTGCGCGTCCCCGGCGCTCGTGAGGTTGTCACCTGGAACCTCGCCATG CTCCTGCGCAAGATCTAG
Upstream 100 bases:
>100_bases CCCGACGTCGAGTGCGCCGGCTTCGAGCACGCCAGCTCCGAACACGTCGACGTCGAGCGTGCCGACGTCCAGCAGGCGGG CGTCGGGGGACCGGCCCGCC
Downstream 100 bases:
>100_bases TGTTTTAGCGCCCTGCCAGAGCCCCGACCTCCGGGCCCGGCCGTCACCGCGCGGCCCGGCCCGGGTCGGCGGGCTCCCCG GGCGGCGCCGGTGGGCGTCT
Product: type 11 methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MRDLPYSGFGLSRSVTLFRAHRKEPVDPAGFYSLIAADSVRQLRRYTTLSGQLVLDVGGGPGYFRSAFLDAGARYYWVEP DVSEMEAGGLDVPGRIRGSALELPFRSDSIDLCYSSNVLEHVPDPWRMCSELVRVTRPGGLIFLSYTNWLSPWGGHETAP WHYLGGDRAADRFEKRQGRPPKNRFGQTLFPVSVAGTLAWARQRSDVVVVDAMPRYLPDWAKAILRVPGAREVVTWNLAM LLRKI
Sequences:
>Translated_245_residues MRDLPYSGFGLSRSVTLFRAHRKEPVDPAGFYSLIAADSVRQLRRYTTLSGQLVLDVGGGPGYFRSAFLDAGARYYWVEP DVSEMEAGGLDVPGRIRGSALELPFRSDSIDLCYSSNVLEHVPDPWRMCSELVRVTRPGGLIFLSYTNWLSPWGGHETAP WHYLGGDRAADRFEKRQGRPPKNRFGQTLFPVSVAGTLAWARQRSDVVVVDAMPRYLPDWAKAILRVPGAREVVTWNLAM LLRKI >Mature_245_residues MRDLPYSGFGLSRSVTLFRAHRKEPVDPAGFYSLIAADSVRQLRRYTTLSGQLVLDVGGGPGYFRSAFLDAGARYYWVEP DVSEMEAGGLDVPGRIRGSALELPFRSDSIDLCYSSNVLEHVPDPWRMCSELVRVTRPGGLIFLSYTNWLSPWGGHETAP WHYLGGDRAADRFEKRQGRPPKNRFGQTLFPVSVAGTLAWARQRSDVVVVDAMPRYLPDWAKAILRVPGAREVVTWNLAM LLRKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 27501; Mature: 27501
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDLPYSGFGLSRSVTLFRAHRKEPVDPAGFYSLIAADSVRQLRRYTTLSGQLVLDVGGG CCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC PGYFRSAFLDAGARYYWVEPDVSEMEAGGLDVPGRIRGSALELPFRSDSIDLCYSSNVLE CHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCHHH HVPDPWRMCSELVRVTRPGGLIFLSYTNWLSPWGGHETAPWHYLGGDRAADRFEKRQGRP HCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCCC PKNRFGQTLFPVSVAGTLAWARQRSDVVVVDAMPRYLPDWAKAILRVPGAREVVTWNLAM CHHHCCCEECHHHHHHHHHHHHCCCCEEEEECCCHHCHHHHHHHHHCCCCCHHHHHHHHH LLRKI HHHCC >Mature Secondary Structure MRDLPYSGFGLSRSVTLFRAHRKEPVDPAGFYSLIAADSVRQLRRYTTLSGQLVLDVGGG CCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC PGYFRSAFLDAGARYYWVEPDVSEMEAGGLDVPGRIRGSALELPFRSDSIDLCYSSNVLE CHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCHHH HVPDPWRMCSELVRVTRPGGLIFLSYTNWLSPWGGHETAPWHYLGGDRAADRFEKRQGRP HCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCCC PKNRFGQTLFPVSVAGTLAWARQRSDVVVVDAMPRYLPDWAKAILRVPGAREVVTWNLAM CHHHCCCEECHHHHHHHHHHHHCCCCEEEEECCCHHCHHHHHHHHHCCCCCHHHHHHHHH LLRKI HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA