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The map label for this gene is pdtaS [H]

Identifier: 158312824

GI number: 158312824

Start: 1132911

End: 1134473

Strand: Direct

Name: pdtaS [H]

Synonym: Franean1_0970

Alternate gene names: 158312824

Gene position: 1132911-1134473 (Clockwise)

Preceding gene: 158312820

Following gene: 158312826

Centisome position: 12.61

GC content: 71.91

Gene sequence:

>1563_bases
ATGGTGCTGTCGGGCGTCACGTCGGCGAGCGTACGGCGCATTCCGGCCCGGCCGCCCGGCACGCCCACCACGGCGTCTGG
CAGTCTGCGTCCCGTGGGAACCCTCGCCGACGCCCTGCGAGCGAGCACCGATCTCAGCGGCGACGACATCGACCATCTCC
ATGCGCTCGTCGCGGACTGGGCCCTGCTCGCCGATCTGTCCTTCGCGGACCTGCTGCTGCTTGTCCCGGTGCGGTCCGGC
TCGGTGCGGGCGGGGCACGCCGGCGGCATGGAGTTCCAGGTCGTCGCGCAGGTACGTCCCACGACCGGACCCACCGCGTA
TCACAACGACGAGGTCGGCAGTGTCGTCATCAACCGGTGGGTCGTGCAGAACGCCTGGCGCGAGCACCGGATCGCGCGGG
AGGGTGAGCCTGAGTGGGACGGCGGGGTGCCGGTGCGCACCGAGGCGATCCCGGTGCGCCACGGCGACCGGGTGATCGCC
GTCCTGGCCCGGGACACCAACCTCGCGACGACCCGGACGCCGAGCGCGCTGGAGTCCGCCTACCTGCAGGGCGCGAACAA
CCTGGCCCTGATGATCGCCGAGGGCGCGTTCCCGTTCCGGGGCAGCTCCGCCGAGCTGCCCGAGGCGCCGCGGGTCGGTG
ACGGCATGATGCGCCTCGACGGCGCCGGCAAGGTGATCTTCGCCAGCCCGAACGCGCTGTCGGCGTACCGCCGGCTCGGC
CACACCGGGAACGTCACCGGCGAGGACCTGCGCACCGTGCACCGCGCGCTCAACCTGCCGGCCACGACGCCCGCGGTCTG
GCACGCGATCAGCCGGCGCCGGCCGGTCGAGGTCGAGATCGAGGTGGGCAGCACGGTCGTGCTGCTGCGGGCCATCCCGC
TCTTCCCCGGCGCGATCCGCGAGGTGCTGGTCCTCGTCCGCGACGTCTCGGAGCTGCGGCGGCGGGAGGCCCAGCTGCTG
AGCAAGGACGCGACGATCCGGGAGATCCACCACCGGGTCAAGAACAACCTGCAGACCGTGGCGGCGCTGCTGCGCCTGCA
GATGCGCCGGACGAAGGCGGACGAGGCCCGCGACGCGCTGCGCGAGTCGGTGCGCCGGGTGACCTCGATCGCCGTCGTCC
ACGAGACGCTCTCCCAGACGCTGGGGGAGTCTGTCCCGTTCGACGAGATCGCCGACCAGATCACCTCGGTGACTGTCGAC
CTCGCGTCGACCGGGACCCGCGCGACGACCAGGCGGATCGGGTCGTTCGGCCGGCTTTCGGGCGAGCTCGCCACGCCGTT
GGCCCTTGTGCTCTCGGAACTTCTGCAGAATGCTGTCGAACATGCGTTCGATGGATCGTCGGGAGCGATCGAGCTCCGCG
TGCGGCGCGCCGAGGACCGCCTCGACGTCGTGGTCGCCGACGACGGCGCCGGCCTGCCGGACGACTTCCAGCTCGAGCAC
TCACCCCGGCTCGGGCTGCAGATCGTCCGTCAGCTGGTGCTGGGCGAGATGCGCGGGACCATCCGGCTGCAGGCCGGTCC
GGCACGAGGGACCGAGGCGCTCCTGTCGATCCCACTTTCTTGA

Upstream 100 bases:

>100_bases
CGCGTGGCTGGTCGCGCCGCCCGCGGGGCCGGGCACGGTGCCGGCGGGGCTGGCCGGGACGCCGTCCGATGCGTCGGCCG
AGGTCGCGGATGGGGTGGTG

Downstream 100 bases:

>100_bases
AGTTGTGTGTTTGGGCCTCGCTGGCGCGGGTATGCAGGCCAACGTGTCCTCTGTTCACGACCCGAGTACGGCGGTCGTGT
CGTCGCCGCAGGGCGGTCGT

Product: signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 520; Mature: 520

Protein sequence:

>520_residues
MVLSGVTSASVRRIPARPPGTPTTASGSLRPVGTLADALRASTDLSGDDIDHLHALVADWALLADLSFADLLLLVPVRSG
SVRAGHAGGMEFQVVAQVRPTTGPTAYHNDEVGSVVINRWVVQNAWREHRIAREGEPEWDGGVPVRTEAIPVRHGDRVIA
VLARDTNLATTRTPSALESAYLQGANNLALMIAEGAFPFRGSSAELPEAPRVGDGMMRLDGAGKVIFASPNALSAYRRLG
HTGNVTGEDLRTVHRALNLPATTPAVWHAISRRRPVEVEIEVGSTVVLLRAIPLFPGAIREVLVLVRDVSELRRREAQLL
SKDATIREIHHRVKNNLQTVAALLRLQMRRTKADEARDALRESVRRVTSIAVVHETLSQTLGESVPFDEIADQITSVTVD
LASTGTRATTRRIGSFGRLSGELATPLALVLSELLQNAVEHAFDGSSGAIELRVRRAEDRLDVVVADDGAGLPDDFQLEH
SPRLGLQIVRQLVLGEMRGTIRLQAGPARGTEALLSIPLS

Sequences:

>Translated_520_residues
MVLSGVTSASVRRIPARPPGTPTTASGSLRPVGTLADALRASTDLSGDDIDHLHALVADWALLADLSFADLLLLVPVRSG
SVRAGHAGGMEFQVVAQVRPTTGPTAYHNDEVGSVVINRWVVQNAWREHRIAREGEPEWDGGVPVRTEAIPVRHGDRVIA
VLARDTNLATTRTPSALESAYLQGANNLALMIAEGAFPFRGSSAELPEAPRVGDGMMRLDGAGKVIFASPNALSAYRRLG
HTGNVTGEDLRTVHRALNLPATTPAVWHAISRRRPVEVEIEVGSTVVLLRAIPLFPGAIREVLVLVRDVSELRRREAQLL
SKDATIREIHHRVKNNLQTVAALLRLQMRRTKADEARDALRESVRRVTSIAVVHETLSQTLGESVPFDEIADQITSVTVD
LASTGTRATTRRIGSFGRLSGELATPLALVLSELLQNAVEHAFDGSSGAIELRVRRAEDRLDVVVADDGAGLPDDFQLEH
SPRLGLQIVRQLVLGEMRGTIRLQAGPARGTEALLSIPLS
>Mature_520_residues
MVLSGVTSASVRRIPARPPGTPTTASGSLRPVGTLADALRASTDLSGDDIDHLHALVADWALLADLSFADLLLLVPVRSG
SVRAGHAGGMEFQVVAQVRPTTGPTAYHNDEVGSVVINRWVVQNAWREHRIAREGEPEWDGGVPVRTEAIPVRHGDRVIA
VLARDTNLATTRTPSALESAYLQGANNLALMIAEGAFPFRGSSAELPEAPRVGDGMMRLDGAGKVIFASPNALSAYRRLG
HTGNVTGEDLRTVHRALNLPATTPAVWHAISRRRPVEVEIEVGSTVVLLRAIPLFPGAIREVLVLVRDVSELRRREAQLL
SKDATIREIHHRVKNNLQTVAALLRLQMRRTKADEARDALRESVRRVTSIAVVHETLSQTLGESVPFDEIADQITSVTVD
LASTGTRATTRRIGSFGRLSGELATPLALVLSELLQNAVEHAFDGSSGAIELRVRRAEDRLDVVVADDGAGLPDDFQLEH
SPRLGLQIVRQLVLGEMRGTIRLQAGPARGTEALLSIPLS

Specific function: Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR [H]

COG id: COG3920

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR022066
- InterPro:   IPR011495
- InterPro:   IPR005467 [H]

Pfam domain/function: PF12282 H_kinase_N; PF02518 HATPase_c; PF07568 HisKA_2 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 56029; Mature: 56029

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLSGVTSASVRRIPARPPGTPTTASGSLRPVGTLADALRASTDLSGDDIDHLHALVADW
CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
ALLADLSFADLLLLVPVRSGSVRAGHAGGMEFQVVAQVRPTTGPTAYHNDEVGSVVINRW
HHHHCCCHHHEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHH
VVQNAWREHRIAREGEPEWDGGVPVRTEAIPVRHGDRVIAVLARDTNLATTRTPSALESA
HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHH
YLQGANNLALMIAEGAFPFRGSSAELPEAPRVGDGMMRLDGAGKVIFASPNALSAYRRLG
HHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCHHHHHHHCC
HTGNVTGEDLRTVHRALNLPATTPAVWHAISRRRPVEVEIEVGSTVVLLRAIPLFPGAIR
CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCEEEEEHHHHCCCHHHH
EVLVLVRDVSELRRREAQLLSKDATIREIHHRVKNNLQTVAALLRLQMRRTKADEARDAL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RESVRRVTSIAVVHETLSQTLGESVPFDEIADQITSVTVDLASTGTRATTRRIGSFGRLS
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEECCCCCCHHHHHHHCCHHHCC
GELATPLALVLSELLQNAVEHAFDGSSGAIELRVRRAEDRLDVVVADDGAGLPDDFQLEH
CHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCC
SPRLGLQIVRQLVLGEMRGTIRLQAGPARGTEALLSIPLS
CCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHEECCCC
>Mature Secondary Structure
MVLSGVTSASVRRIPARPPGTPTTASGSLRPVGTLADALRASTDLSGDDIDHLHALVADW
CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
ALLADLSFADLLLLVPVRSGSVRAGHAGGMEFQVVAQVRPTTGPTAYHNDEVGSVVINRW
HHHHCCCHHHEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHH
VVQNAWREHRIAREGEPEWDGGVPVRTEAIPVRHGDRVIAVLARDTNLATTRTPSALESA
HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHH
YLQGANNLALMIAEGAFPFRGSSAELPEAPRVGDGMMRLDGAGKVIFASPNALSAYRRLG
HHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCHHHHHHHCC
HTGNVTGEDLRTVHRALNLPATTPAVWHAISRRRPVEVEIEVGSTVVLLRAIPLFPGAIR
CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCEEEEEHHHHCCCHHHH
EVLVLVRDVSELRRREAQLLSKDATIREIHHRVKNNLQTVAALLRLQMRRTKADEARDAL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RESVRRVTSIAVVHETLSQTLGESVPFDEIADQITSVTVDLASTGTRATTRRIGSFGRLS
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEECCCCCCHHHHHHHCCHHHCC
GELATPLALVLSELLQNAVEHAFDGSSGAIELRVRRAEDRLDVVVADDGAGLPDDFQLEH
CHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCC
SPRLGLQIVRQLVLGEMRGTIRLQAGPARGTEALLSIPLS
CCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]