| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312819
Identifier: 158312819
GI number: 158312819
Start: 1128988
End: 1129206
Strand: Direct
Name: 158312819
Synonym: Franean1_0965
Alternate gene names: NA
Gene position: 1128988-1129206 (Clockwise)
Preceding gene: 158312817
Following gene: 158312820
Centisome position: 12.57
GC content: 65.3
Gene sequence:
>219_bases ATGTCCGAGGAAGTCCGTGCCGAGATGGTCGCCAACGTCTGGAAGGTCGTCGTCGGTGTCGGCGACTCGGTCGCGGCGGG TGACGCCCTGGTAATCCTTGACTCCATGAAGATGGAGATCCCGGTGATCAGCGAGGAGGGCGGCACCGTCGCCAGCATCG CCGTCAACGAGGGCGACGTCGTGCAGGACGGGGACCTGATCGCCGTCGTCGACTCCTGA
Upstream 100 bases:
>100_bases TTGCGATCCTGCGCCGACCCGGCGGCTACTACGCTCACATCAGCCGGCGCCGCAGCGCGGTCGACCGGGAGAAGCGGTCG ACGTGGAGAAGGGGATTCCG
Downstream 100 bases:
>100_bases CCGGCCAGCCCGGCCGTCGGTGACGCGCTGCCGGGGGGCGACGTGACGGCGCGGACTTCCCGCCGTCGGGCGCGGGCCGC TTGCCCTAGGCTGATCCGTC
Product: biotin/lipoyl attachment domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 71
Protein sequence:
>72_residues MSEEVRAEMVANVWKVVVGVGDSVAAGDALVILDSMKMEIPVISEEGGTVASIAVNEGDVVQDGDLIAVVDS
Sequences:
>Translated_72_residues MSEEVRAEMVANVWKVVVGVGDSVAAGDALVILDSMKMEIPVISEEGGTVASIAVNEGDVVQDGDLIAVVDS >Mature_71_residues SEEVRAEMVANVWKVVVGVGDSVAAGDALVILDSMKMEIPVISEEGGTVASIAVNEGDVVQDGDLIAVVDS
Specific function: Unknown
COG id: COG0511
COG function: function code I; Biotin carboxyl carrier protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotinyl-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000089 - InterPro: IPR011053 [H]
Pfam domain/function: PF00364 Biotin_lipoyl [H]
EC number: NA
Molecular weight: Translated: 7387; Mature: 7256
Theoretical pI: Translated: 3.52; Mature: 3.52
Prosite motif: PS01098 LIPASE_GDSL_SER ; PS50968 BIOTINYL_LIPOYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEEVRAEMVANVWKVVVGVGDSVAAGDALVILDSMKMEIPVISEEGGTVASIAVNEGDV CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEEEECCCCEEEEEEECCCCE VQDGDLIAVVDS EECCCEEEEEEC >Mature Secondary Structure SEEVRAEMVANVWKVVVGVGDSVAAGDALVILDSMKMEIPVISEEGGTVASIAVNEGDV CHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEEEECCCCEEEEEEECCCCE VQDGDLIAVVDS EECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10400584 [H]