Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158312819

Identifier: 158312819

GI number: 158312819

Start: 1128988

End: 1129206

Strand: Direct

Name: 158312819

Synonym: Franean1_0965

Alternate gene names: NA

Gene position: 1128988-1129206 (Clockwise)

Preceding gene: 158312817

Following gene: 158312820

Centisome position: 12.57

GC content: 65.3

Gene sequence:

>219_bases
ATGTCCGAGGAAGTCCGTGCCGAGATGGTCGCCAACGTCTGGAAGGTCGTCGTCGGTGTCGGCGACTCGGTCGCGGCGGG
TGACGCCCTGGTAATCCTTGACTCCATGAAGATGGAGATCCCGGTGATCAGCGAGGAGGGCGGCACCGTCGCCAGCATCG
CCGTCAACGAGGGCGACGTCGTGCAGGACGGGGACCTGATCGCCGTCGTCGACTCCTGA

Upstream 100 bases:

>100_bases
TTGCGATCCTGCGCCGACCCGGCGGCTACTACGCTCACATCAGCCGGCGCCGCAGCGCGGTCGACCGGGAGAAGCGGTCG
ACGTGGAGAAGGGGATTCCG

Downstream 100 bases:

>100_bases
CCGGCCAGCCCGGCCGTCGGTGACGCGCTGCCGGGGGGCGACGTGACGGCGCGGACTTCCCGCCGTCGGGCGCGGGCCGC
TTGCCCTAGGCTGATCCGTC

Product: biotin/lipoyl attachment domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MSEEVRAEMVANVWKVVVGVGDSVAAGDALVILDSMKMEIPVISEEGGTVASIAVNEGDVVQDGDLIAVVDS

Sequences:

>Translated_72_residues
MSEEVRAEMVANVWKVVVGVGDSVAAGDALVILDSMKMEIPVISEEGGTVASIAVNEGDVVQDGDLIAVVDS
>Mature_71_residues
SEEVRAEMVANVWKVVVGVGDSVAAGDALVILDSMKMEIPVISEEGGTVASIAVNEGDVVQDGDLIAVVDS

Specific function: Unknown

COG id: COG0511

COG function: function code I; Biotin carboxyl carrier protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 biotinyl-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000089
- InterPro:   IPR011053 [H]

Pfam domain/function: PF00364 Biotin_lipoyl [H]

EC number: NA

Molecular weight: Translated: 7387; Mature: 7256

Theoretical pI: Translated: 3.52; Mature: 3.52

Prosite motif: PS01098 LIPASE_GDSL_SER ; PS50968 BIOTINYL_LIPOYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEEVRAEMVANVWKVVVGVGDSVAAGDALVILDSMKMEIPVISEEGGTVASIAVNEGDV
CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEEEECCCCEEEEEEECCCCE
VQDGDLIAVVDS
EECCCEEEEEEC
>Mature Secondary Structure 
SEEVRAEMVANVWKVVVGVGDSVAAGDALVILDSMKMEIPVISEEGGTVASIAVNEGDV
CHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEEEECCCCEEEEEEECCCCE
VQDGDLIAVVDS
EECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10400584 [H]