| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is terZ [H]
Identifier: 158312754
GI number: 158312754
Start: 1051978
End: 1053417
Strand: Direct
Name: terZ [H]
Synonym: Franean1_0900
Alternate gene names: 158312754
Gene position: 1051978-1053417 (Clockwise)
Preceding gene: 158312752
Following gene: 158312755
Centisome position: 11.71
GC content: 73.96
Gene sequence:
>1440_bases ATGGCACAGGTGCTAAGCAAGGGCGCGAACGCCCCGCTTCCGACGACGGATGTGCGGGTCGAGGTGTCTTCGTCCACCCC GCTCGACATCGCCGCGTTGCTGGTCACCCCGTCCGGCAAGGTGCGGGGGGACGCCGACTTCGTCTTCTTCAACCAGCCGG CCGGTCCGGGGGTGCGCCTCGCGCCGCCGTCGGCGCTGGAGTTCATGCTCACCGCGGTGCCGCCCGACATCGACAAGGTC GTGGTCACAGGCAGCCTGGACGGCGCCGGCCCGCCGACCTTCGCCGGCGTGCGCGGCCTGGCCGTGATCGTGCGGGACGC GCGCGGCCAGGAGGTCGTCCGGTTCGACCCGGCCGGGATGAGCAGCGAGACGGCCCTCGTGCTGGTCGAGCTGTACCGCC GTGCCGGGAGCTGGAAGGTGCGTGCCGTCGGCCAGGGCTACGCCTCCGGCCTGGCCGGGATCGCCACCGACTTCGGGATC ACCGTCGACGACCCGGGCTCCGGGAACACCGCGGCGGCACCAGCGTCCGCGGGCCCCGGAGCCGGAACGGGGGCCCCGCC ACCGTCGCAGTACGACGCCCCGACGCAGGTCGTCTCGCCCCCGCCCGGTCAGCAGTGGGGTCCGCCGCCTGGCGCGCCGC CGCAGGCTCCGCCGCCGCCGAACCCGCAGCAGTGGGGCCCGCCGCCGGGCCAGCAGTGGGGTCCCCCGCCGGGCCAGCAG TGGGGTCCGCCGCCCGGCGCGCCGCCGCAGGCTCCGCCGCCGCCGAACCCGCAGCAGTGGGGCCCGCCGCCGGGCCAGCA GTGGGGTCCGCCGCCCGCCGGCCCGCCCGGCCCGGGTGCTCCCGCCGGCGCGGTGCCCGGCCGGGTGAACCTGGACAAGG GCCGGGTCTCGCTGCGCAAGGGCCAGAGCGTGTCCCTGGTCAAGACCGGCGCCCCGCCGCTGGTCCGGGTCCGGATGGGT CTCGGCTGGGATCCCGCGCAGCAGGGCCGCTCCATCGACCTCGACGCGTCCTGCATCCTGTTCGACGACCGCGGGAAGGA CGTCGACAAGGTCTGGTTCATGTCGAAGAAGGGGGCGCGTGGCGCTGTCCGCCACTCGGGGGACAACCTCACCGGCCAGG GCGAGGGCGATGACGAGACCATCTTCGTCGATCTCGGCGCGCTGCCGCAGAACGTCGTCAGCCTGATCTTCACGGTGAAC AGCTTCCAGGGGCAGTCCTTCACCGACATCCGCAATGCCTTCTGCCGGCTCGTCGACGACCAGACCAACCAGGAGCTGGT GCGGTTCGACCTGTCCGAGTCGAAGCCGGCGACGGGACTGGTGATGTGCCGTCTCCAGCGGGAGCCGGGGGCGCCAACCT GGGTGATGACCGCGATCGGCGAGTTCCACGACGGGCGTACCGTGCGCGCGATGGTCGGGCCGTCCCGCCAGTACCTCTGA
Upstream 100 bases:
>100_bases ATCGTCGTCGTGGGTGGGATCGTCGGTTGCGCTCATAGCGGTCGATCGTAGGATCGCCACGCCGCGGCAGTTCGTTGTGA CGGCGGATGGGAGGGCCCAC
Downstream 100 bases:
>100_bases ACCGGTGCTGCTGCCGGGCCCGGCAGCAGCACCGGCGAAGTGCCGGTGTGGTGCCAGGCCCGGTAGCGGCACGGTGTGAT GCCGGTGTGGCGCCGCTGAC
Product: stress protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MAQVLSKGANAPLPTTDVRVEVSSSTPLDIAALLVTPSGKVRGDADFVFFNQPAGPGVRLAPPSALEFMLTAVPPDIDKV VVTGSLDGAGPPTFAGVRGLAVIVRDARGQEVVRFDPAGMSSETALVLVELYRRAGSWKVRAVGQGYASGLAGIATDFGI TVDDPGSGNTAAAPASAGPGAGTGAPPPSQYDAPTQVVSPPPGQQWGPPPGAPPQAPPPPNPQQWGPPPGQQWGPPPGQQ WGPPPGAPPQAPPPPNPQQWGPPPGQQWGPPPAGPPGPGAPAGAVPGRVNLDKGRVSLRKGQSVSLVKTGAPPLVRVRMG LGWDPAQQGRSIDLDASCILFDDRGKDVDKVWFMSKKGARGAVRHSGDNLTGQGEGDDETIFVDLGALPQNVVSLIFTVN SFQGQSFTDIRNAFCRLVDDQTNQELVRFDLSESKPATGLVMCRLQREPGAPTWVMTAIGEFHDGRTVRAMVGPSRQYL
Sequences:
>Translated_479_residues MAQVLSKGANAPLPTTDVRVEVSSSTPLDIAALLVTPSGKVRGDADFVFFNQPAGPGVRLAPPSALEFMLTAVPPDIDKV VVTGSLDGAGPPTFAGVRGLAVIVRDARGQEVVRFDPAGMSSETALVLVELYRRAGSWKVRAVGQGYASGLAGIATDFGI TVDDPGSGNTAAAPASAGPGAGTGAPPPSQYDAPTQVVSPPPGQQWGPPPGAPPQAPPPPNPQQWGPPPGQQWGPPPGQQ WGPPPGAPPQAPPPPNPQQWGPPPGQQWGPPPAGPPGPGAPAGAVPGRVNLDKGRVSLRKGQSVSLVKTGAPPLVRVRMG LGWDPAQQGRSIDLDASCILFDDRGKDVDKVWFMSKKGARGAVRHSGDNLTGQGEGDDETIFVDLGALPQNVVSLIFTVN SFQGQSFTDIRNAFCRLVDDQTNQELVRFDLSESKPATGLVMCRLQREPGAPTWVMTAIGEFHDGRTVRAMVGPSRQYL >Mature_478_residues AQVLSKGANAPLPTTDVRVEVSSSTPLDIAALLVTPSGKVRGDADFVFFNQPAGPGVRLAPPSALEFMLTAVPPDIDKVV VTGSLDGAGPPTFAGVRGLAVIVRDARGQEVVRFDPAGMSSETALVLVELYRRAGSWKVRAVGQGYASGLAGIATDFGIT VDDPGSGNTAAAPASAGPGAGTGAPPPSQYDAPTQVVSPPPGQQWGPPPGAPPQAPPPPNPQQWGPPPGQQWGPPPGQQW GPPPGAPPQAPPPPNPQQWGPPPGQQWGPPPAGPPGPGAPAGAVPGRVNLDKGRVSLRKGQSVSLVKTGAPPLVRVRMGL GWDPAQQGRSIDLDASCILFDDRGKDVDKVWFMSKKGARGAVRHSGDNLTGQGEGDDETIFVDLGALPQNVVSLIFTVNS FQGQSFTDIRNAFCRLVDDQTNQELVRFDLSESKPATGLVMCRLQREPGAPTWVMTAIGEFHDGRTVRAMVGPSRQYL
Specific function: Not known; seems to contribute to the tellurium resistance (Ter) mechanism. Also involved in phage inhibition (Phi) and colicin resistance (PacB) [H]
COG id: COG2310
COG function: function code T; Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CAPAB/TerDEXZ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019303 - InterPro: IPR003325 [H]
Pfam domain/function: PF10138 Tellurium_res; PF02342 TerD [H]
EC number: NA
Molecular weight: Translated: 49751; Mature: 49619
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQVLSKGANAPLPTTDVRVEVSSSTPLDIAALLVTPSGKVRGDADFVFFNQPAGPGVRL CCHHHHCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCEEE APPSALEFMLTAVPPDIDKVVVTGSLDGAGPPTFAGVRGLAVIVRDARGQEVVRFDPAGM CCCHHHHHHHECCCCCCCEEEEEECCCCCCCCHHHHHCEEEEEEECCCCCEEEEECCCCC SSETALVLVELYRRAGSWKVRAVGQGYASGLAGIATDFGITVDDPGSGNTAAAPASAGPG CCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCC AGTGAPPPSQYDAPTQVVSPPPGQQWGPPPGAPPQAPPPPNPQQWGPPPGQQWGPPPGQQ CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC WGPPPGAPPQAPPPPNPQQWGPPPGQQWGPPPAGPPGPGAPAGAVPGRVNLDKGRVSLRK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEC GQSVSLVKTGAPPLVRVRMGLGWDPAQQGRSIDLDASCILFDDRGKDVDKVWFMSKKGAR CCEEEEEECCCCCEEEEEECCCCCHHHCCCEECCCCEEEEECCCCCCHHHEEEECCCCCC GAVRHSGDNLTGQGEGDDETIFVDLGALPQNVVSLIFTVNSFQGQSFTDIRNAFCRLVDD CCEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCC QTNQELVRFDLSESKPATGLVMCRLQREPGAPTWVMTAIGEFHDGRTVRAMVGPSRQYL CCCCEEEEEECCCCCCCCEEEEEEEECCCCCCEEEEEHHHHHCCCCEEEEEECCCCCCC >Mature Secondary Structure AQVLSKGANAPLPTTDVRVEVSSSTPLDIAALLVTPSGKVRGDADFVFFNQPAGPGVRL CHHHHCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCEEE APPSALEFMLTAVPPDIDKVVVTGSLDGAGPPTFAGVRGLAVIVRDARGQEVVRFDPAGM CCCHHHHHHHECCCCCCCEEEEEECCCCCCCCHHHHHCEEEEEEECCCCCEEEEECCCCC SSETALVLVELYRRAGSWKVRAVGQGYASGLAGIATDFGITVDDPGSGNTAAAPASAGPG CCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCC AGTGAPPPSQYDAPTQVVSPPPGQQWGPPPGAPPQAPPPPNPQQWGPPPGQQWGPPPGQQ CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC WGPPPGAPPQAPPPPNPQQWGPPPGQQWGPPPAGPPGPGAPAGAVPGRVNLDKGRVSLRK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEC GQSVSLVKTGAPPLVRVRMGLGWDPAQQGRSIDLDASCILFDDRGKDVDKVWFMSKKGAR CCEEEEEECCCCCEEEEEECCCCCHHHCCCEECCCCEEEEECCCCCCHHHEEEECCCCCC GAVRHSGDNLTGQGEGDDETIFVDLGALPQNVVSLIFTVNSFQGQSFTDIRNAFCRLVDD CCEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCC QTNQELVRFDLSESKPATGLVMCRLQREPGAPTWVMTAIGEFHDGRTVRAMVGPSRQYL CCCCEEEEEECCCCCCCCEEEEEEEECCCCCCEEEEEHHHHHCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7665479 [H]