| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312646
Identifier: 158312646
GI number: 158312646
Start: 917486
End: 918769
Strand: Direct
Name: 158312646
Synonym: Franean1_0790
Alternate gene names: NA
Gene position: 917486-918769 (Clockwise)
Preceding gene: 158312645
Following gene: 158312647
Centisome position: 10.21
GC content: 70.17
Gene sequence:
>1284_bases ATGTCATCCGGAACCTCAGCAGAAGGAAGCCCGGCCGCGGGAGGCGTCGCCGCCCCGGTCACCGCCTGCCGATCGTGTGA CGGGCCCGCCCCGCGTGTCTTCCTGTCGCTGGGTGACACCCCTGTCGCGAACCGGCTCGTGAAGGCGGACGCCCTCGACG CCGTGGACCCGGCCTTCCCGCTGGAGGTCGGCTTCTGCGAGCAGTGCGCGCTCGTCCAGCTGACTCACGTGCTCCCCGCC GACGAGATCTTCGACGCCGACTACCCGTACTTCTCGTCGTTCTCCGACATGCTCGTCCGGCACTCCGAGAAGCACGTGAT CGACCTGATCGCGAGCCGCGACCTCGGCCCGGAGAGCCTGGTCGTCGAGGTCGCCAGCAACGACGGGTACCTGCTCAAGG CGTTCGTCGAGCGCGGCATACCGGTGCTGGGCATCGAGCCGACCCCCGGCCCGGCCGCCGCCGCGCGCAAGGCGGGCGTG CCCACCCGCGAGGAGTTCTTCGGGGCCGACCTCGCCCGCACGCTCGTCGCCGAGGGCCTGCGGGCGGACGTCATCATCGC CAACAACGTGATGGCGCACGTCCCCGACCTCAACAGCTTCGTCGAGGGCTTCTCGATCCTGCTCGCCGACGACGGGATCG TCGACGTCGAGAACCCCGGGGTCGGCGCGCTGCTGGCGCACAACGAGTTCGACACCGTCTACCACGAGCACTTCTGCTAC TTCTCCACGATCGCGGTGGACGCCCTCATGCGCCGCCACGACCTGCAGCTCGTCGGCGTCGAGGAGTTCGCGGACCTGCA CGGCGGGACGCTGCGCTGGCGGATGCAGCACCAGGGCGCCGCCGAGCCGACCGGGTCGGTGAAGGCCGTCCTGGACGCGG AGCGCACCGCCGGCCTCGGGACGTTCGAGCGCTACGGCAGCTTCGGTGACGACGTCCGCGTGCTGCAGGGCGAGCTGACC GAGCTGCTGCGCTCGCTGAAGGCCGAGGGGAAGTCCATCGCGGCCTACGGCGCGGCGGCCAAGGGCGCCACCCTGCTGAA CTCGACCGGCATCGACCACACGCTGATCGACTTCGTCGTCGACCGGAACGTGCACAAGCAGGGCAAGTACATCCCGGGCG CGCGGATCCCGATCCTCGACCCGGCCGTGCTGCTTGAGCGCCAGCCCGACTACCTGCTGCTGCTCGCGTGGAACGTGAAG AAGGAGATCATGGCCCAGCAGGAGGAGTACGCCTCTCGGGGCGGCCGCTTCGTCGTGCCCGTGCCCCGTCCGGTCGTGCT CTAG
Upstream 100 bases:
>100_bases GCCGAAGTACAGCCAGCTGAAGTGCCGCCAGCTGAAGTGCAGCCAGCCGAACCGCCGCTCACCGGTCACCGCGCGCCGGT CACCTCGAACAGGGGAACGC
Downstream 100 bases:
>100_bases GAGAGCCCAACCCAACGAAGCGATGACATCAGCGTCGGCAGCCCTCCGGCTGCGCCCAGCACCCCGCGGCCCGGACGTCC TCGACGTCCCGGGCGGGACG
Product: C-methyltransferase
Products: NA
Alternate protein names: Methyltransferase; SAM-Dependent Methyltransferase; D-Mycarose 3-C-Methyltransferase; NDP-Hexose 3-C-Methyltransferase Protein; NDP-Hexose 3-C-Methyltransferase TylCIII; Sugar 3-C-Methyl Transferase; Methyltransferase Type; Methyltransferase Family Protein; C-3 Methyl Transferase; NDP-Hexose Methyltransferase Protein; NAD-Dependent Epimerase/Dehydratase; Methyltransferase-Like Protein; Transferase; Aminotransferase Class-III; S-Adenosyl-L-Methionine-Dependent Methyltransferase; NDP-4-Keto-2 6-Dideoxyhexose 3-C-Methyltransferase; S-Adenosyl-Dependent Methyltransferase; S-Adenosyl-Dependent Methyl Transferase; NDP-Hexose 3-C-Methyltransferase; EryBIII NDP-4-Keto-2 6-Dideoxyhexose 3-C-Methyltransferase; C-Methyltransferase Family
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MSSGTSAEGSPAAGGVAAPVTACRSCDGPAPRVFLSLGDTPVANRLVKADALDAVDPAFPLEVGFCEQCALVQLTHVLPA DEIFDADYPYFSSFSDMLVRHSEKHVIDLIASRDLGPESLVVEVASNDGYLLKAFVERGIPVLGIEPTPGPAAAARKAGV PTREEFFGADLARTLVAEGLRADVIIANNVMAHVPDLNSFVEGFSILLADDGIVDVENPGVGALLAHNEFDTVYHEHFCY FSTIAVDALMRRHDLQLVGVEEFADLHGGTLRWRMQHQGAAEPTGSVKAVLDAERTAGLGTFERYGSFGDDVRVLQGELT ELLRSLKAEGKSIAAYGAAAKGATLLNSTGIDHTLIDFVVDRNVHKQGKYIPGARIPILDPAVLLERQPDYLLLLAWNVK KEIMAQQEEYASRGGRFVVPVPRPVVL
Sequences:
>Translated_427_residues MSSGTSAEGSPAAGGVAAPVTACRSCDGPAPRVFLSLGDTPVANRLVKADALDAVDPAFPLEVGFCEQCALVQLTHVLPA DEIFDADYPYFSSFSDMLVRHSEKHVIDLIASRDLGPESLVVEVASNDGYLLKAFVERGIPVLGIEPTPGPAAAARKAGV PTREEFFGADLARTLVAEGLRADVIIANNVMAHVPDLNSFVEGFSILLADDGIVDVENPGVGALLAHNEFDTVYHEHFCY FSTIAVDALMRRHDLQLVGVEEFADLHGGTLRWRMQHQGAAEPTGSVKAVLDAERTAGLGTFERYGSFGDDVRVLQGELT ELLRSLKAEGKSIAAYGAAAKGATLLNSTGIDHTLIDFVVDRNVHKQGKYIPGARIPILDPAVLLERQPDYLLLLAWNVK KEIMAQQEEYASRGGRFVVPVPRPVVL >Mature_426_residues SSGTSAEGSPAAGGVAAPVTACRSCDGPAPRVFLSLGDTPVANRLVKADALDAVDPAFPLEVGFCEQCALVQLTHVLPAD EIFDADYPYFSSFSDMLVRHSEKHVIDLIASRDLGPESLVVEVASNDGYLLKAFVERGIPVLGIEPTPGPAAAARKAGVP TREEFFGADLARTLVAEGLRADVIIANNVMAHVPDLNSFVEGFSILLADDGIVDVENPGVGALLAHNEFDTVYHEHFCYF STIAVDALMRRHDLQLVGVEEFADLHGGTLRWRMQHQGAAEPTGSVKAVLDAERTAGLGTFERYGSFGDDVRVLQGELTE LLRSLKAEGKSIAAYGAAAKGATLLNSTGIDHTLIDFVVDRNVHKQGKYIPGARIPILDPAVLLERQPDYLLLLAWNVKK EIMAQQEEYASRGGRFVVPVPRPVVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45806; Mature: 45674
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSGTSAEGSPAAGGVAAPVTACRSCDGPAPRVFLSLGDTPVANRLVKADALDAVDPAFP CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCC LEVGFCEQCALVQLTHVLPADEIFDADYPYFSSFSDMLVRHSEKHVIDLIASRDLGPESL CCCCCHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCE VVEVASNDGYLLKAFVERGIPVLGIEPTPGPAAAARKAGVPTREEFFGADLARTLVAEGL EEEEECCCCEEEHHHHHCCCCEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC RADVIIANNVMAHVPDLNSFVEGFSILLADDGIVDVENPGVGALLAHNEFDTVYHEHFCY CEEEEEECCCEEECCCHHHHHCCEEEEEECCCEEEECCCCCEEEEECCCHHHHHHHHHHH FSTIAVDALMRRHDLQLVGVEEFADLHGGTLRWRMQHQGAAEPTGSVKAVLDAERTAGLG HHHHHHHHHHHHCCCEEEEHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEHHHHCCCC TFERYGSFGDDVRVLQGELTELLRSLKAEGKSIAAYGAAAKGATLLNSTGIDHTLIDFVV CHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCCCHHHHHHHH DRNVHKQGKYIPGARIPILDPAVLLERQPDYLLLLAWNVKKEIMAQQEEYASRGGRFVVP CCCHHHCCCCCCCCCCCCCCHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHCCCEEEEE VPRPVVL CCCCCCC >Mature Secondary Structure SSGTSAEGSPAAGGVAAPVTACRSCDGPAPRVFLSLGDTPVANRLVKADALDAVDPAFP CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCC LEVGFCEQCALVQLTHVLPADEIFDADYPYFSSFSDMLVRHSEKHVIDLIASRDLGPESL CCCCCHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCE VVEVASNDGYLLKAFVERGIPVLGIEPTPGPAAAARKAGVPTREEFFGADLARTLVAEGL EEEEECCCCEEEHHHHHCCCCEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC RADVIIANNVMAHVPDLNSFVEGFSILLADDGIVDVENPGVGALLAHNEFDTVYHEHFCY CEEEEEECCCEEECCCHHHHHCCEEEEEECCCEEEECCCCCEEEEECCCHHHHHHHHHHH FSTIAVDALMRRHDLQLVGVEEFADLHGGTLRWRMQHQGAAEPTGSVKAVLDAERTAGLG HHHHHHHHHHHHCCCEEEEHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEHHHHCCCC TFERYGSFGDDVRVLQGELTELLRSLKAEGKSIAAYGAAAKGATLLNSTGIDHTLIDFVV CHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCCCHHHHHHHH DRNVHKQGKYIPGARIPILDPAVLLERQPDYLLLLAWNVKKEIMAQQEEYASRGGRFVVP CCCHHHCCCCCCCCCCCCCCHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHCCCEEEEE VPRPVVL CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA