| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is wbbJ [C]
Identifier: 158312616
GI number: 158312616
Start: 886961
End: 887560
Strand: Direct
Name: wbbJ [C]
Synonym: Franean1_0760
Alternate gene names: 158312616
Gene position: 886961-887560 (Clockwise)
Preceding gene: 158312615
Following gene: 158312619
Centisome position: 9.87
GC content: 73.33
Gene sequence:
>600_bases ATGAGCAGTTCGCTACCCGAGCGGTCCCTCGACCTGTGGCGCAGGGCCCGGAGCCGGGCCTTCACCCGGTTCCTGGCCGG GTCGTTCGGGGCGCTCGGCCCGCGTACCGACATCGAGCCGCCGTTCCGGCTCTACGGCGCCCGCTGGATGTCGATCGGCG CCGGCGTCCATGTGGGCCCCGGCTCGTGGTTCCAGGTGATCGATGGGGACGGTGAGCCGGCGGCGCCGGTGATTCGAATC GGCGCGGGCTCGTCGTTCGTCGGGTGGTGCACGCTGTCGGCCGTACGCGGCATCACGATCGGGGACAGAGCGATGTTCGC GCGTGGCGTCTACGTGGCCGACCATGACCACGCCTACCGGGCGGCCGGCGTCGCGATCCGGGACCAGGGCCACACGGGCG TCGCCCCGGTGGTGATCGGCGACGGCGCCTGGCTGGGCCAGAACTGTGTGGTCACAGCGGGCTCGACGATCGGCCGCGGC GCCGTCGTCGGCGCGAACAGCGTCGTGAAGGGGGTCGTGCCCGACTTCAGTCTCGCGGTAGGGGCGCCCGCCCGGGTCGT CCGGAGCTGGGCGTCGCACGGCGTCCCGAGCCGGCCGTGA
Upstream 100 bases:
>100_bases CCCCGTACACCGAGCCCACGGGCGGCGTCCCCAGCCAGTCGCGCGTCCCGCCCGAGCCCGCATCCGGCACGTGTCACCCG TCCCGACATCTGACGAGGCC
Downstream 100 bases:
>100_bases GGCCGGGTCGCCGGTCAGCCCGGCGGCCCGGCCAGTCTGCGGCTGGCCAGTCTGTGCTCGGTCAGCTCGGGTCCGCGTCC CCGCGGCCGGCGACCTCGGC
Product: hexapaptide repeat-containing transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MSSSLPERSLDLWRRARSRAFTRFLAGSFGALGPRTDIEPPFRLYGARWMSIGAGVHVGPGSWFQVIDGDGEPAAPVIRI GAGSSFVGWCTLSAVRGITIGDRAMFARGVYVADHDHAYRAAGVAIRDQGHTGVAPVVIGDGAWLGQNCVVTAGSTIGRG AVVGANSVVKGVVPDFSLAVGAPARVVRSWASHGVPSRP
Sequences:
>Translated_199_residues MSSSLPERSLDLWRRARSRAFTRFLAGSFGALGPRTDIEPPFRLYGARWMSIGAGVHVGPGSWFQVIDGDGEPAAPVIRI GAGSSFVGWCTLSAVRGITIGDRAMFARGVYVADHDHAYRAAGVAIRDQGHTGVAPVVIGDGAWLGQNCVVTAGSTIGRG AVVGANSVVKGVVPDFSLAVGAPARVVRSWASHGVPSRP >Mature_198_residues SSSLPERSLDLWRRARSRAFTRFLAGSFGALGPRTDIEPPFRLYGARWMSIGAGVHVGPGSWFQVIDGDGEPAAPVIRIG AGSSFVGWCTLSAVRGITIGDRAMFARGVYVADHDHAYRAAGVAIRDQGHTGVAPVVIGDGAWLGQNCVVTAGSTIGRGA VVGANSVVKGVVPDFSLAVGAPARVVRSWASHGVPSRP
Specific function: Putative O-Acetyltransferase That Transfers An O-Acetyl Group To The O Antigen. [C]
COG id: COG0110
COG function: function code R; Acetyltransferase (isoleucine patch superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1788345, Length=108, Percent_Identity=32.4074074074074, Blast_Score=70, Evalue=7e-14, Organism=Escherichia coli, GI1786537, Length=191, Percent_Identity=26.7015706806283, Blast_Score=61, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018357 - InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: 2.3.1.- [C]
Molecular weight: Translated: 20720; Mature: 20589
Theoretical pI: Translated: 11.06; Mature: 11.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSLPERSLDLWRRARSRAFTRFLAGSFGALGPRTDIEPPFRLYGARWMSIGAGVHVGP CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHEEEECCCEEECC GSWFQVIDGDGEPAAPVIRIGAGSSFVGWCTLSAVRGITIGDRAMFARGVYVADHDHAYR CCEEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHCCCEECCHHHHHCCEEEECCCCCHH AAGVAIRDQGHTGVAPVVIGDGAWLGQNCVVTAGSTIGRGAVVGANSVVKGVVPDFSLAV HCCEEEECCCCCCCCEEEEECCCEECCCEEEECCCCCCCCEEECCCHHHHCCCCCCEEEC GAPARVVRSWASHGVPSRP CCHHHHHHHHHHCCCCCCC >Mature Secondary Structure SSSLPERSLDLWRRARSRAFTRFLAGSFGALGPRTDIEPPFRLYGARWMSIGAGVHVGP CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHEEEECCCEEECC GSWFQVIDGDGEPAAPVIRIGAGSSFVGWCTLSAVRGITIGDRAMFARGVYVADHDHAYR CCEEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHCCCEECCHHHHHCCEEEECCCCCHH AAGVAIRDQGHTGVAPVVIGDGAWLGQNCVVTAGSTIGRGAVVGANSVVKGVVPDFSLAV HCCEEEECCCCCCCCEEEEECCCEECCCEEEECCCCCCCCEEECCCHHHHCCCCCCEEEC GAPARVVRSWASHGVPSRP CCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]