| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is epsO [H]
Identifier: 158312606
GI number: 158312606
Start: 875208
End: 876269
Strand: Direct
Name: epsO [H]
Synonym: Franean1_0750
Alternate gene names: 158312606
Gene position: 875208-876269 (Clockwise)
Preceding gene: 158312605
Following gene: 158312607
Centisome position: 9.74
GC content: 69.02
Gene sequence:
>1062_bases ATGACGGAGGCCGCGACAGGGGTCCCGTATGCCTCGACGGCAGCGGTCGCATCCACTGCCCGCCTGATCGAGAGCCTGTC GACGCGGGCCACGGCCGCCGTCGCCGACCTGCTGCCGCCGGGGACGACCGACGTGGCGCTCCTCGACTTCCCGTACCACC GCAACAGTGGTGACTCGGCCATCTGGCTCGGCGTACGCCAGATTCTCCGACAGCTGGGAGTAAGGGTCGCCTACGTCGCG GACACCGCGCGCTACCGGCCGGACCGGTTACGGGAGGCACTGCCGGAGGGGCCTGTCCTGTTACTCGGCGGGGGGAATTT CGGTGACCTCTGGCCGGGGCATCAGGAGCTCCGGGTCCGGGCCCTGCGTGACTTCCCGGACCGTACCGTGATCCAACTTC CGCAGAGTATTTCCTTCCGTAGCCGGACGGCGCTTTCCGAGGCCCAGCGCGTGACCGCGGCCCACCCACATTTCACTCTT ATGGTCCGTGAACGGCGCAGCCTTTCGTTCGCCACCGAGAACTTCGATGTGCCGCTCGTGTTCGCGCCGGACTCGGCCCT GGCCAACGGCCCGCTGAGACCGCCGTGGCCGGTACGTCCCGACGGCGTGCTGTGTCTTGCCCGCGATGACGTTGAGGGCA CCGGAGCCATCGCGGGCGTGGCCGGCCCCGGCATACGTCGGGCCGACTGGGGAATGCGTGGCCTGCCCGCGGCGCGGTGG AGAGCGGCGAAGGCGCTGCCGAAACTCGAGCGGCATGCCCTGGCCCGGCATCCGGATGCGCACCGGGCGGCCCGCCCCGC GCTGCACGCGGCCTATGAAACAATGGCGAAGACAAGCGTGGGAACGGCGACGAGCCTCCTGTGCACCGCGCGTTATGTGG TGACCGACCGGTTGCACGCGCACATTCTCTGCCTGCTTCTCGGTATCCCCCACTCGGTGTTTGACAACAGCTACGGAAAG GTCAGTGGGACCTTCGAGGCGTGGACCTCGGACAGCGACCTCGTGCACTGGGCGACCAGCGCGGACGAGGCCCTGGAGAG GTGCCGGGAGTTCGCGCCGTGA
Upstream 100 bases:
>100_bases TGTGCGGCGGCGGGCCCTGCACGGCCGGGCCGCGACGACCTGACGCGGTGCTGTACCGACGGACCATCCGAGGATTACGG GATGTTGGGGGACGCGAGTA
Downstream 100 bases:
>100_bases CCGCCGCACCGCGACACGGTGTCGGTGTTCGTGCCGACACGGCTGCTCGTGCCGACACGGCCGTTCGTGCCGACACGGCC GGCACGAGTCGTGAGCCACG
Product: polysaccharide pyruvyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MTEAATGVPYASTAAVASTARLIESLSTRATAAVADLLPPGTTDVALLDFPYHRNSGDSAIWLGVRQILRQLGVRVAYVA DTARYRPDRLREALPEGPVLLLGGGNFGDLWPGHQELRVRALRDFPDRTVIQLPQSISFRSRTALSEAQRVTAAHPHFTL MVRERRSLSFATENFDVPLVFAPDSALANGPLRPPWPVRPDGVLCLARDDVEGTGAIAGVAGPGIRRADWGMRGLPAARW RAAKALPKLERHALARHPDAHRAARPALHAAYETMAKTSVGTATSLLCTARYVVTDRLHAHILCLLLGIPHSVFDNSYGK VSGTFEAWTSDSDLVHWATSADEALERCREFAP
Sequences:
>Translated_353_residues MTEAATGVPYASTAAVASTARLIESLSTRATAAVADLLPPGTTDVALLDFPYHRNSGDSAIWLGVRQILRQLGVRVAYVA DTARYRPDRLREALPEGPVLLLGGGNFGDLWPGHQELRVRALRDFPDRTVIQLPQSISFRSRTALSEAQRVTAAHPHFTL MVRERRSLSFATENFDVPLVFAPDSALANGPLRPPWPVRPDGVLCLARDDVEGTGAIAGVAGPGIRRADWGMRGLPAARW RAAKALPKLERHALARHPDAHRAARPALHAAYETMAKTSVGTATSLLCTARYVVTDRLHAHILCLLLGIPHSVFDNSYGK VSGTFEAWTSDSDLVHWATSADEALERCREFAP >Mature_352_residues TEAATGVPYASTAAVASTARLIESLSTRATAAVADLLPPGTTDVALLDFPYHRNSGDSAIWLGVRQILRQLGVRVAYVAD TARYRPDRLREALPEGPVLLLGGGNFGDLWPGHQELRVRALRDFPDRTVIQLPQSISFRSRTALSEAQRVTAAHPHFTLM VRERRSLSFATENFDVPLVFAPDSALANGPLRPPWPVRPDGVLCLARDDVEGTGAIAGVAGPGIRRADWGMRGLPAARWR AAKALPKLERHALARHPDAHRAARPALHAAYETMAKTSVGTATSLLCTARYVVTDRLHAHILCLLLGIPHSVFDNSYGKV SGTFEAWTSDSDLVHWATSADEALERCREFAP
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]
COG id: COG5039
COG function: function code GM; Exopolysaccharide biosynthesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polysaccharide pyruvyl transferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007345 [H]
Pfam domain/function: PF04230 PS_pyruv_trans [H]
EC number: NA
Molecular weight: Translated: 38337; Mature: 38206
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEAATGVPYASTAAVASTARLIESLSTRATAAVADLLPPGTTDVALLDFPYHRNSGDSA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCE IWLGVRQILRQLGVRVAYVADTARYRPDRLREALPEGPVLLLGGGNFGDLWPGHQELRVR EHHHHHHHHHHHCCEEEEEEHHHHCCHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHH ALRDFPDRTVIQLPQSISFRSRTALSEAQRVTAAHPHFTLMVRERRSLSFATENFDVPLV HHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCEEEE FAPDSALANGPLRPPWPVRPDGVLCLARDDVEGTGAIAGVAGPGIRRADWGMRGLPAARW ECCCHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCHHHH RAAKALPKLERHALARHPDAHRAARPALHAAYETMAKTSVGTATSLLCTARYVVTDRLHA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH HILCLLLGIPHSVFDNSYGKVSGTFEAWTSDSDLVHWATSADEALERCREFAP HHHHHHHHCCHHHHCCCCCCCCCCEEEECCCCCEEEEECCHHHHHHHHHHCCC >Mature Secondary Structure TEAATGVPYASTAAVASTARLIESLSTRATAAVADLLPPGTTDVALLDFPYHRNSGDSA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCE IWLGVRQILRQLGVRVAYVADTARYRPDRLREALPEGPVLLLGGGNFGDLWPGHQELRVR EHHHHHHHHHHHCCEEEEEEHHHHCCHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHH ALRDFPDRTVIQLPQSISFRSRTALSEAQRVTAAHPHFTLMVRERRSLSFATENFDVPLV HHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCEEEE FAPDSALANGPLRPPWPVRPDGVLCLARDDVEGTGAIAGVAGPGIRRADWGMRGLPAARW ECCCHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCHHHH RAAKALPKLERHALARHPDAHRAARPALHAAYETMAKTSVGTATSLLCTARYVVTDRLHA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH HILCLLLGIPHSVFDNSYGKVSGTFEAWTSDSDLVHWATSADEALERCREFAP HHHHHHHHCCHHHHCCCCCCCCCCEEEECCCCCEEEEECCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]