| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312563
Identifier: 158312563
GI number: 158312563
Start: 824235
End: 824642
Strand: Direct
Name: 158312563
Synonym: Franean1_0707
Alternate gene names: NA
Gene position: 824235-824642 (Clockwise)
Preceding gene: 158312562
Following gene: 158312564
Centisome position: 9.18
GC content: 71.32
Gene sequence:
>408_bases GTGCGGCGCCGTGCGCGAGGAGGCTTCGGGCGCAGTCCAGGACCGTCTGCTCAGCGGGCCGGGGCTGCCAGCCGAGGAGG TCGCCCGCTACGGACCGCTCGAGTACGGGGTCGCCGAGGTAATCCACGCGATGACCAACGGCGGGCTCGACAACGAGCAC TACGAGCCTTTCCCCGGGGCGATCGCCGTCTACTCGAAGCCGGCGCCGCCGAGGGCACGCTCAAGCCCGAGATCGATCCG GAGGATGTGCTGTTGCAGCTCAGCGTCCTGTGGCGGATCCCGCCGGGCGCCGGGAGCGGGTCGAGGGCCGCCCGGATCCT CGATCTCATCATCGACGGCGTGCGGACCCGGCCCCCGTCGTGGGACCGCGATGAGCCGTCGGCGGCACTAAAGTCGCGGG ATGAGTAG
Upstream 100 bases:
>100_bases GTTACCTCGACAGGATCGAGCCTCGAGCCGCGAACTCCGACCGGGGACCGAAACCCTCTCCGGCGACAACGCGCGAATAG CTACCGGCGAGTGTCGGACT
Downstream 100 bases:
>100_bases CCGCACCTTCCGCATCATGGTCCGGGGCGCCTTCGACGCTCTCACCCCGGATCAGCGCGCCGAGCTTCTGGCCGACGCGG CGGAGCACGACGTCCTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MRRRARGGFGRSPGPSAQRAGAASRGGRPLRTARVRGRRGNPRDDQRRARQRALRAFPRGDRRLLEAGAAEGTLKPEIDP EDVLLQLSVLWRIPPGAGSGSRAARILDLIIDGVRTRPPSWDRDEPSAALKSRDE
Sequences:
>Translated_135_residues MRRRARGGFGRSPGPSAQRAGAASRGGRPLRTARVRGRRGNPRDDQRRARQRALRAFPRGDRRLLEAGAAEGTLKPEIDP EDVLLQLSVLWRIPPGAGSGSRAARILDLIIDGVRTRPPSWDRDEPSAALKSRDE >Mature_135_residues MRRRARGGFGRSPGPSAQRAGAASRGGRPLRTARVRGRRGNPRDDQRRARQRALRAFPRGDRRLLEAGAAEGTLKPEIDP EDVLLQLSVLWRIPPGAGSGSRAARILDLIIDGVRTRPPSWDRDEPSAALKSRDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14848; Mature: 14848
Theoretical pI: Translated: 12.35; Mature: 12.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRARGGFGRSPGPSAQRAGAASRGGRPLRTARVRGRRGNPRDDQRRARQRALRAFPRG CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC DRRLLEAGAAEGTLKPEIDPEDVLLQLSVLWRIPPGAGSGSRAARILDLIIDGVRTRPPS HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCC WDRDEPSAALKSRDE CCCCCCHHHHCCCCC >Mature Secondary Structure MRRRARGGFGRSPGPSAQRAGAASRGGRPLRTARVRGRRGNPRDDQRRARQRALRAFPRG CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC DRRLLEAGAAEGTLKPEIDPEDVLLQLSVLWRIPPGAGSGSRAARILDLIIDGVRTRPPS HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCC WDRDEPSAALKSRDE CCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA