| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yrpG [H]
Identifier: 158312558
GI number: 158312558
Start: 819956
End: 821002
Strand: Direct
Name: yrpG [H]
Synonym: Franean1_0701
Alternate gene names: 158312558
Gene position: 819956-821002 (Clockwise)
Preceding gene: 158312556
Following gene: 158312560
Centisome position: 9.13
GC content: 69.63
Gene sequence:
>1047_bases ATGCGCTACCTGACCTTCGGACGGCACACCGGCCTGCGGGTCTCGGAGTACGCGCTCGGGACCGCGAACTTCGGCACGGC CGACACCAGCGCCGGTCGGGACACCTCGCGGCAGATCTTCGACGCCTTCGTCGCCGCCGGCGGTACGACGTTCGACACGT CCAACCTCTACCAGGACGGACAGGCCGAGACCGTGCTCGGTGAGCTGCTCGGCAGTCGCCGGGACGACTTCGTCGTGATC ACCAAGTACGGCGGGACGAGGCGGGACCAGCCCCGCCCCGGCACGACCGGCAACAGCCGAAAGATCATGATTCGCTCCCT GGAGGCCAGCCTGCGGCGGCTGAACACGGACTACGTCGACGTCTTCATGCCGCACTTCCCCGACGGAACCACCCCGATCG ACGAGATCCTGGCCGGGTTCGACGACCTGAGCCGCGCCGGGAAGATCCGGTACGGCGGGCTGTCCAACTTTCCGGCCTGG CGGGTCGCCGGCGCCGTGGTCCGGGCGGACCTGCGCGGACTCGCCCCGCTGGTCGGCATCCAGACCGAGTACAGCCTGGC CGAACGCTCCGCCGAGCGGGAACTGCTACCGATGGTGCAGGCCCATGGCCTGGGAGTGTTCCTGTACTCGCCGCTGGCCG GAGGTCTGCTCAGCGGCAAGTACCGGCAGGGTGGGAAAGGCCGGTTGAGCGTTCGCGGCGACGCCGTCGAGCGCACCGTT CAGCAGAGCGCCGTCGTCGACGGGGTGTTGGCCGTCGCCGACGAGATCGGCAGCACCGCGGTCCAGGTCTCGCTGGCCTG GCTGCGTCGCCGGGCCGTGTCGGCCCGGACCGCGCTGATCCCGATCGTCGGGCCTCGCACGCTGTCCCACCTCGAGCAGT ACCTGCGCTCGCTCGAGCTGGAACTCGACGAACAGCACTGTCGACGTCTCGACGAGATCAGCGCGATCCGGTTGGGCACT CCGCACGAGGACGTCGCGGCAGCTCTGGCCCACGGCTTCGACGGCGACCGCACCCTGCTCCAGACCCTGTACCTCCCCGT GATCTGA
Upstream 100 bases:
>100_bases AGGTGCGCCTGCCCTACCCTCGGCATAAAAAGAACGACCCCTCGTTTTACTTGGTACGGCACGGGCAGCCTACCTCGCAC CACACCCTCCGGGAGTCCTC
Downstream 100 bases:
>100_bases CCGGTGCGCGTTCACCGACTCATCGACCGGATCGGACACTCCGGTGGCGGTTGGTCACCCGGCGCCCGGTACCGGGGTGA GCTCCAGGTGCAGCTCGGTC
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MRYLTFGRHTGLRVSEYALGTANFGTADTSAGRDTSRQIFDAFVAAGGTTFDTSNLYQDGQAETVLGELLGSRRDDFVVI TKYGGTRRDQPRPGTTGNSRKIMIRSLEASLRRLNTDYVDVFMPHFPDGTTPIDEILAGFDDLSRAGKIRYGGLSNFPAW RVAGAVVRADLRGLAPLVGIQTEYSLAERSAERELLPMVQAHGLGVFLYSPLAGGLLSGKYRQGGKGRLSVRGDAVERTV QQSAVVDGVLAVADEIGSTAVQVSLAWLRRRAVSARTALIPIVGPRTLSHLEQYLRSLELELDEQHCRRLDEISAIRLGT PHEDVAAALAHGFDGDRTLLQTLYLPVI
Sequences:
>Translated_348_residues MRYLTFGRHTGLRVSEYALGTANFGTADTSAGRDTSRQIFDAFVAAGGTTFDTSNLYQDGQAETVLGELLGSRRDDFVVI TKYGGTRRDQPRPGTTGNSRKIMIRSLEASLRRLNTDYVDVFMPHFPDGTTPIDEILAGFDDLSRAGKIRYGGLSNFPAW RVAGAVVRADLRGLAPLVGIQTEYSLAERSAERELLPMVQAHGLGVFLYSPLAGGLLSGKYRQGGKGRLSVRGDAVERTV QQSAVVDGVLAVADEIGSTAVQVSLAWLRRRAVSARTALIPIVGPRTLSHLEQYLRSLELELDEQHCRRLDEISAIRLGT PHEDVAAALAHGFDGDRTLLQTLYLPVI >Mature_348_residues MRYLTFGRHTGLRVSEYALGTANFGTADTSAGRDTSRQIFDAFVAAGGTTFDTSNLYQDGQAETVLGELLGSRRDDFVVI TKYGGTRRDQPRPGTTGNSRKIMIRSLEASLRRLNTDYVDVFMPHFPDGTTPIDEILAGFDDLSRAGKIRYGGLSNFPAW RVAGAVVRADLRGLAPLVGIQTEYSLAERSAERELLPMVQAHGLGVFLYSPLAGGLLSGKYRQGGKGRLSVRGDAVERTV QQSAVVDGVLAVADEIGSTAVQVSLAWLRRRAVSARTALIPIVGPRTLSHLEQYLRSLELELDEQHCRRLDEISAIRLGT PHEDVAAALAHGFDGDRTLLQTLYLPVI
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436964, Length=339, Percent_Identity=31.2684365781711, Blast_Score=125, Evalue=5e-29, Organism=Homo sapiens, GI27436962, Length=339, Percent_Identity=31.2684365781711, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI27436969, Length=291, Percent_Identity=33.6769759450172, Blast_Score=123, Evalue=2e-28, Organism=Homo sapiens, GI4504825, Length=293, Percent_Identity=33.7883959044369, Blast_Score=123, Evalue=3e-28, Organism=Homo sapiens, GI27436966, Length=339, Percent_Identity=30.9734513274336, Blast_Score=121, Evalue=8e-28, Organism=Homo sapiens, GI27436971, Length=339, Percent_Identity=31.2684365781711, Blast_Score=115, Evalue=4e-26, Organism=Homo sapiens, GI223718702, Length=196, Percent_Identity=37.7551020408163, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI41152114, Length=195, Percent_Identity=35.3846153846154, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI41327764, Length=187, Percent_Identity=36.3636363636364, Blast_Score=99, Evalue=7e-21, Organism=Homo sapiens, GI223718708, Length=168, Percent_Identity=36.3095238095238, Blast_Score=79, Evalue=9e-15, Organism=Escherichia coli, GI87081735, Length=324, Percent_Identity=33.9506172839506, Blast_Score=157, Evalue=1e-39, Organism=Escherichia coli, GI1789199, Length=343, Percent_Identity=32.0699708454811, Blast_Score=114, Evalue=7e-27, Organism=Escherichia coli, GI1788081, Length=305, Percent_Identity=31.1475409836066, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1789375, Length=288, Percent_Identity=31.5972222222222, Blast_Score=108, Evalue=6e-25, Organism=Escherichia coli, GI1788070, Length=238, Percent_Identity=32.7731092436975, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1787674, Length=317, Percent_Identity=26.1829652996845, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI48994888, Length=152, Percent_Identity=30.2631578947368, Blast_Score=66, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6323998, Length=337, Percent_Identity=28.486646884273, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6319958, Length=305, Percent_Identity=28.8524590163934, Blast_Score=150, Evalue=3e-37, Organism=Saccharomyces cerevisiae, GI6319951, Length=339, Percent_Identity=26.2536873156342, Blast_Score=131, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6325169, Length=333, Percent_Identity=26.1261261261261, Blast_Score=118, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6322615, Length=259, Percent_Identity=27.7992277992278, Blast_Score=115, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6321052, Length=147, Percent_Identity=31.9727891156463, Blast_Score=80, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 37873; Mature: 37873
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYLTFGRHTGLRVSEYALGTANFGTADTSAGRDTSRQIFDAFVAAGGTTFDTSNLYQDG CCEEECCCCCCCEEHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC QAETVLGELLGSRRDDFVVITKYGGTRRDQPRPGTTGNSRKIMIRSLEASLRRLNTDYVD CHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCEE VFMPHFPDGTTPIDEILAGFDDLSRAGKIRYGGLSNFPAWRVAGAVVRADLRGLAPLVGI EECCCCCCCCCCHHHHHHCHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHCHHHHCC QTEYSLAERSAERELLPMVQAHGLGVFLYSPLAGGLLSGKYRQGGKGRLSVRGDAVERTV CCHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHCHHHCCCCCCCCCCEEEECCHHHHHHH QQSAVVDGVLAVADEIGSTAVQVSLAWLRRRAVSARTALIPIVGPRTLSHLEQYLRSLEL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHCC ELDEQHCRRLDEISAIRLGTPHEDVAAALAHGFDGDRTLLQTLYLPVI CCCHHHHHHHHHHCEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHCCC >Mature Secondary Structure MRYLTFGRHTGLRVSEYALGTANFGTADTSAGRDTSRQIFDAFVAAGGTTFDTSNLYQDG CCEEECCCCCCCEEHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC QAETVLGELLGSRRDDFVVITKYGGTRRDQPRPGTTGNSRKIMIRSLEASLRRLNTDYVD CHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCEE VFMPHFPDGTTPIDEILAGFDDLSRAGKIRYGGLSNFPAWRVAGAVVRADLRGLAPLVGI EECCCCCCCCCCHHHHHHCHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHCHHHHCC QTEYSLAERSAERELLPMVQAHGLGVFLYSPLAGGLLSGKYRQGGKGRLSVRGDAVERTV CCHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHCHHHCCCCCCCCCCEEEECCHHHHHHH QQSAVVDGVLAVADEIGSTAVQVSLAWLRRRAVSARTALIPIVGPRTLSHLEQYLRSLEL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHCC ELDEQHCRRLDEISAIRLGTPHEDVAAALAHGFDGDRTLLQTLYLPVI CCCHHHHHHHHHHCEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9308178; 9384377 [H]