| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is tmrB [H]
Identifier: 158312552
GI number: 158312552
Start: 816001
End: 816636
Strand: Direct
Name: tmrB [H]
Synonym: Franean1_0695
Alternate gene names: 158312552
Gene position: 816001-816636 (Clockwise)
Preceding gene: 158312551
Following gene: 158312554
Centisome position: 9.08
GC content: 66.35
Gene sequence:
>636_bases ATGTTGGTCTGGCTGAACCTGACTATTCTTCGGCCGGTGCCGACCCTCATCTGGATCAACGGTCCGAACGCCGTCGGGAA AACCCAGGTCGCCCACAATCTGCACCGCAGACTGCCTGGAAGCTTCATCAGCGACCCCGAGCATCTCGGCTTCGCGATGC GTCGGATGCTCCCGAAGCCCCGCCGCAGGGACTTCCGCGACGTTCCCCTGTGGCGCCGGGCGGTCAGCGAGATGCTCCAC CTCGCTCTCCAAGGTCTCGAGGACCCGGTGATCGTGCCGATGACCATCCTCGACGCCGGCCCGCTCGCCGAACTGACGGC CCCGGCCCGTAACGCCGGACACCGTGTCGCTCACGTCACGCTTCTTGCCGACCGCACGACGATGATCCGCCGTATCCACC GGCGCGGGGAAACGTCCCGCAGTTACAGCGCCCGCCAGCTCGACCATGCCCTCGACGTCCTGCGAGCCCCTGAGTTCGCC CGCCATCTCCCTACCGAATCCCTGTCGCTCTCCGCCGTGGCGGATGACATCGCAAGCCACGCCGGGTTCACGCTCGGTCC TGACACGGCAGGGCGACTCGTGCGACATGGACACCAACTCGCCGTCCAGCTACGCCACATTCGCCTCAACGCTTGA
Upstream 100 bases:
>100_bases CGACGGTACGTGGAGACTGCCACTGCATGAGGACCACAGGCTGGTCGGGCCCCGGGGGCGCTCGTCAACCGCGGGCGTCC GCCGTGGTGTGTGGTGGGCG
Downstream 100 bases:
>100_bases AGATCAGCGGGCTGTCGCCGACCATCGCCACCGGAAGCGCGTCAGAGCCGCTGGCCGGCCCGGCCCGGTGGCTGGCGAAA AACCGGGCGCGCCGACGTAG
Product: antibiotic resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MLVWLNLTILRPVPTLIWINGPNAVGKTQVAHNLHRRLPGSFISDPEHLGFAMRRMLPKPRRRDFRDVPLWRRAVSEMLH LALQGLEDPVIVPMTILDAGPLAELTAPARNAGHRVAHVTLLADRTTMIRRIHRRGETSRSYSARQLDHALDVLRAPEFA RHLPTESLSLSAVADDIASHAGFTLGPDTAGRLVRHGHQLAVQLRHIRLNA
Sequences:
>Translated_211_residues MLVWLNLTILRPVPTLIWINGPNAVGKTQVAHNLHRRLPGSFISDPEHLGFAMRRMLPKPRRRDFRDVPLWRRAVSEMLH LALQGLEDPVIVPMTILDAGPLAELTAPARNAGHRVAHVTLLADRTTMIRRIHRRGETSRSYSARQLDHALDVLRAPEFA RHLPTESLSLSAVADDIASHAGFTLGPDTAGRLVRHGHQLAVQLRHIRLNA >Mature_211_residues MLVWLNLTILRPVPTLIWINGPNAVGKTQVAHNLHRRLPGSFISDPEHLGFAMRRMLPKPRRRDFRDVPLWRRAVSEMLH LALQGLEDPVIVPMTILDAGPLAELTAPARNAGHRVAHVTLLADRTTMIRRIHRRGETSRSYSARQLDHALDVLRAPEFA RHLPTESLSLSAVADDIASHAGFTLGPDTAGRLVRHGHQLAVQLRHIRLNA
Specific function: Involved in the resistance to tunicamycin. Binds ATP [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23633; Mature: 23633
Theoretical pI: Translated: 11.99; Mature: 11.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVWLNLTILRPVPTLIWINGPNAVGKTQVAHNLHRRLPGSFISDPEHLGFAMRRMLPKP CEEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC RRRDFRDVPLWRRAVSEMLHLALQGLEDPVIVPMTILDAGPLAELTAPARNAGHRVAHVT CCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHCCCCCCCCEEEEEE LLADRTTMIRRIHRRGETSRSYSARQLDHALDVLRAPEFARHLPTESLSLSAVADDIASH EEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHH AGFTLGPDTAGRLVRHGHQLAVQLRHIRLNA CCCCCCCCHHHHHHHHHHHHHHHHHHHEECC >Mature Secondary Structure MLVWLNLTILRPVPTLIWINGPNAVGKTQVAHNLHRRLPGSFISDPEHLGFAMRRMLPKP CEEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC RRRDFRDVPLWRRAVSEMLHLALQGLEDPVIVPMTILDAGPLAELTAPARNAGHRVAHVT CCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHCCCCCCCCEEEEEE LLADRTTMIRRIHRRGETSRSYSARQLDHALDVLRAPEFARHLPTESLSLSAVADDIASH EEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHH AGFTLGPDTAGRLVRHGHQLAVQLRHIRLNA CCCCCCCCHHHHHHHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969502; 9384377; 1624425 [H]