Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158312535

Identifier: 158312535

GI number: 158312535

Start: 800144

End: 800401

Strand: Direct

Name: 158312535

Synonym: Franean1_0678

Alternate gene names: NA

Gene position: 800144-800401 (Clockwise)

Preceding gene: 158312529

Following gene: 158312536

Centisome position: 8.91

GC content: 64.73

Gene sequence:

>258_bases
GTGACCCGCCTCGCGGGGCACGCGGCGCGGGGCCGTGCCGGGATCGCGGCACAGGCAGCAGCACAGGTCGCAGTGCCGGC
CGCGGTGGGTGCGTGGCCGGGCCCGGCCCGCGGTGGCGGGCGGAGCACCCGTCCGCGACTTTCTGCATACCGAGCTGTAT
ACAGTGTCGTGTACATGAAAGTGAAGGTAGAGACGAAGAATTTTCTGATCAACACTCGCGCAGTTACATTCACACGTCGA
CGGTTAAGTACCCGTTAA

Upstream 100 bases:

>100_bases
GGTTTCCCGAGCCGGAGGCCCGGGTGGTTGGCGACGGTGTCATGACGCCGAGCATCTGCCATGGACGGCGCGGACGTACC
ACCCGCCCGCCGTCCCACCA

Downstream 100 bases:

>100_bases
TCGAGGGTGCGGAAGGTGGCCGGATGGAGCCGCGCGGTGCGCACGGGACCCGCAGCACCCCCCAGGGCGGCACCACGCAG
GGCGGCCCCGCACAGGGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 84

Protein sequence:

>85_residues
MTRLAGHAARGRAGIAAQAAAQVAVPAAVGAWPGPARGGGRSTRPRLSAYRAVYSVVYMKVKVETKNFLINTRAVTFTRR
RLSTR

Sequences:

>Translated_85_residues
MTRLAGHAARGRAGIAAQAAAQVAVPAAVGAWPGPARGGGRSTRPRLSAYRAVYSVVYMKVKVETKNFLINTRAVTFTRR
RLSTR
>Mature_84_residues
TRLAGHAARGRAGIAAQAAAQVAVPAAVGAWPGPARGGGRSTRPRLSAYRAVYSVVYMKVKVETKNFLINTRAVTFTRRR
LSTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9097; Mature: 8966

Theoretical pI: Translated: 12.71; Mature: 12.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLAGHAARGRAGIAAQAAAQVAVPAAVGAWPGPARGGGRSTRPRLSAYRAVYSVVYMK
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEE
VKVETKNFLINTRAVTFTRRRLSTR
EEECCCCEEEECHHHEEEHHHCCCC
>Mature Secondary Structure 
TRLAGHAARGRAGIAAQAAAQVAVPAAVGAWPGPARGGGRSTRPRLSAYRAVYSVVYMK
CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEE
VKVETKNFLINTRAVTFTRRRLSTR
EEECCCCEEEECHHHEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA