| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312492
Identifier: 158312492
GI number: 158312492
Start: 737094
End: 738779
Strand: Direct
Name: 158312492
Synonym: Franean1_0635
Alternate gene names: NA
Gene position: 737094-738779 (Clockwise)
Preceding gene: 158312491
Following gene: 158312493
Centisome position: 8.21
GC content: 78.11
Gene sequence:
>1686_bases GTGAGCGAGCCGACCCCCCGGACGCTGCCGGGGTTCACACCCGCCGCATGGGGACTGCTCGCCGCGACGGCCGCCTGCGC CCTCGGGGCGGTGCTCCTGCGCTACGCGGAGCTCGCCGCCTTCGCCGGTGCCGGCGCGGCGGCGCTGTTCACCGCGGTGG CAGCGGTGGCCCGTCCGCCGCGGGTCACCGTCACGACACGGGTCACCCCTGCCGCGGTCACCCGCGGGGACGACGCCGCC CTGGTCATCTCGATCGTGAACCACTCCCGATGGACGTCTCCCTCGTTCGCCCTACGCCTGCCAGCCGAGCCGGCCCAGCC GGGCGAGGTGCCCGCCGAGCCCGCCGAGCCCGCCGAGCCCGGCGGGTCTGTCGGGTCCGACGGGCCCGAGATCGCCGTGG ACATCCGCCCGTTGCGCGGTGGCGCCAGCCGGGAGATCGTCCTGCCGCTCGACACCGCGGCTCGGGGAGTTCGCCGGATC GGGCCCCCGCAGGTGCACCGGTCTGATCCGTTCGGGCTGGCCCACCGCCACCAGTACCTCGGCACGAGCCTCACCCTGCG GGTCCGCCCCCGCGCATACCCGCTGGTCCCACCGCCGGCCGCCCCGGCCCGTGACCCCGACGGGCAGAGCGGACGTGGCG CGTCCGGGGGGCTGATGTTCCACACCCTGCGCGAGTACACCCCCGGGGAGGACCTGCGCCTGGTGCACTGGGCCGCCAGC GCGCGCACGGGCACGCTGATGGTCCGAACGCACCTGGACCCCAGTGAGCCCGCCTCCACCGTCGTGCTGGACACCCGCCG GCGGGCCTACCCGCCCGGCCCGGTCGGGGCGGCCGTCTTCGAGGACGCCGTCGACGTCGCCGCGTCCGCGGTGCTCGCCT GCGCCCGCAACTCCTACGGCGTCCGCCTGGTCACCTCGGGCGGGGTGCGGATGACCGGTCGCCGACGCTCCACCGACGCC GAGTCCCTCCTCGACGAGCTGGCCGACGTCCGGCCGGACGAGGGCGTGACCCTGGATGTCCTGCGTACCCTGCGCCGCGG GCCCGTCGGCACCCTCGTCCTGGTGACCGGCGCGCTCGACCGGGACGCGGCGGCGGCGCTCGCCCCGGTGGCCCACGTGT TCGGCCAGGTGATCGTGCTTCGGATGGGCCCGCGCAGCGAGGCCGCCGCGCTGGCCCGGGGCCGGCGCGCCCTCGGCGAC CGCCCACGCCTGCGCCCGAGTGCGGAGGCGGTGGCACGGGCCCGCGCGGAACGAGGCGGCCCGGTCGCCCCCGCCGGGCC CACCCGCTCGACGGGACCGGCGGGCGCGGCCCGTACGGCAGGTGCGACCCGCATGGCCGGTGTGGCCGGTGCCGCTGGTG TGGCGGGGTCGGTTGGCATGGTCGGCACCGCCGGTTCGGGCCGGGTGCGGATGATCCACCTGGGCTCACCCGCCGACCTG ACCGACGTCTGGCCTGCCGCGCCCCTCCCGCCCCGGGCGCCGGCCGCGGACCAGGCGGCCGCGAGTCCAGCGGCAGTGGG CTCGGCGGGATCGGGTTCGGCGGGATCGGGTTCAGGGGGATGGGGTCAGGCCGAAACCGAGCCGGACCTGGCGGGACCGC TGCTACCGGTGGCCTCCCTGGCGTCGGCCGGCCCCGGCCCCGGCCCCAGGCCCAGGACTGGGCGCGGCGCGGGCGGCGGA TCGTGA
Upstream 100 bases:
>100_bases TCGTGCTCAGTCCGGAGGCCGAGCTGCGCCGGGTCACCGCCGAGGACGTCGTCGCCGAGGTCCTGGACGCGGTCCCCTCG CCCCGTCGCCTCGTGGGCGC
Downstream 100 bases:
>100_bases CCGGCGCCGCGGGCCCGGCCCGCCGAGCCACCTTCGCCCCGAGCGAGGCCGGTCTACGCCGCATCGCCGCGCTGGCCGTC GTCGCCGCCCTCGCCCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 561; Mature: 560
Protein sequence:
>561_residues MSEPTPRTLPGFTPAAWGLLAATAACALGAVLLRYAELAAFAGAGAAALFTAVAAVARPPRVTVTTRVTPAAVTRGDDAA LVISIVNHSRWTSPSFALRLPAEPAQPGEVPAEPAEPAEPGGSVGSDGPEIAVDIRPLRGGASREIVLPLDTAARGVRRI GPPQVHRSDPFGLAHRHQYLGTSLTLRVRPRAYPLVPPPAAPARDPDGQSGRGASGGLMFHTLREYTPGEDLRLVHWAAS ARTGTLMVRTHLDPSEPASTVVLDTRRRAYPPGPVGAAVFEDAVDVAASAVLACARNSYGVRLVTSGGVRMTGRRRSTDA ESLLDELADVRPDEGVTLDVLRTLRRGPVGTLVLVTGALDRDAAAALAPVAHVFGQVIVLRMGPRSEAAALARGRRALGD RPRLRPSAEAVARARAERGGPVAPAGPTRSTGPAGAARTAGATRMAGVAGAAGVAGSVGMVGTAGSGRVRMIHLGSPADL TDVWPAAPLPPRAPAADQAAASPAAVGSAGSGSAGSGSGGWGQAETEPDLAGPLLPVASLASAGPGPGPRPRTGRGAGGG S
Sequences:
>Translated_561_residues MSEPTPRTLPGFTPAAWGLLAATAACALGAVLLRYAELAAFAGAGAAALFTAVAAVARPPRVTVTTRVTPAAVTRGDDAA LVISIVNHSRWTSPSFALRLPAEPAQPGEVPAEPAEPAEPGGSVGSDGPEIAVDIRPLRGGASREIVLPLDTAARGVRRI GPPQVHRSDPFGLAHRHQYLGTSLTLRVRPRAYPLVPPPAAPARDPDGQSGRGASGGLMFHTLREYTPGEDLRLVHWAAS ARTGTLMVRTHLDPSEPASTVVLDTRRRAYPPGPVGAAVFEDAVDVAASAVLACARNSYGVRLVTSGGVRMTGRRRSTDA ESLLDELADVRPDEGVTLDVLRTLRRGPVGTLVLVTGALDRDAAAALAPVAHVFGQVIVLRMGPRSEAAALARGRRALGD RPRLRPSAEAVARARAERGGPVAPAGPTRSTGPAGAARTAGATRMAGVAGAAGVAGSVGMVGTAGSGRVRMIHLGSPADL TDVWPAAPLPPRAPAADQAAASPAAVGSAGSGSAGSGSGGWGQAETEPDLAGPLLPVASLASAGPGPGPRPRTGRGAGGG S >Mature_560_residues SEPTPRTLPGFTPAAWGLLAATAACALGAVLLRYAELAAFAGAGAAALFTAVAAVARPPRVTVTTRVTPAAVTRGDDAAL VISIVNHSRWTSPSFALRLPAEPAQPGEVPAEPAEPAEPGGSVGSDGPEIAVDIRPLRGGASREIVLPLDTAARGVRRIG PPQVHRSDPFGLAHRHQYLGTSLTLRVRPRAYPLVPPPAAPARDPDGQSGRGASGGLMFHTLREYTPGEDLRLVHWAASA RTGTLMVRTHLDPSEPASTVVLDTRRRAYPPGPVGAAVFEDAVDVAASAVLACARNSYGVRLVTSGGVRMTGRRRSTDAE SLLDELADVRPDEGVTLDVLRTLRRGPVGTLVLVTGALDRDAAAALAPVAHVFGQVIVLRMGPRSEAAALARGRRALGDR PRLRPSAEAVARARAERGGPVAPAGPTRSTGPAGAARTAGATRMAGVAGAAGVAGSVGMVGTAGSGRVRMIHLGSPADLT DVWPAAPLPPRAPAADQAAASPAAVGSAGSGSAGSGSGGWGQAETEPDLAGPLLPVASLASAGPGPGPRPRTGRGAGGGS
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56539; Mature: 56407
Theoretical pI: Translated: 11.40; Mature: 11.40
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPTPRTLPGFTPAAWGLLAATAACALGAVLLRYAELAAFAGAGAAALFTAVAAVARPP CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC RVTVTTRVTPAAVTRGDDAALVISIVNHSRWTSPSFALRLPAEPAQPGEVPAEPAEPAEP CEEEEEECCHHHEECCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC GGSVGSDGPEIAVDIRPLRGGASREIVLPLDTAARGVRRIGPPQVHRSDPFGLAHRHQYL CCCCCCCCCEEEEEEEECCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCHHHHHHHC GTSLTLRVRPRAYPLVPPPAAPARDPDGQSGRGASGGLMFHTLREYTPGEDLRLVHWAAS CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECC ARTGTLMVRTHLDPSEPASTVVLDTRRRAYPPGPVGAAVFEDAVDVAASAVLACARNSYG CCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC VRLVTSGGVRMTGRRRSTDAESLLDELADVRPDEGVTLDVLRTLRRGPVGTLVLVTGALD EEEEECCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEEECCCC RDAAAALAPVAHVFGQVIVLRMGPRSEAAALARGRRALGDRPRLRPSAEAVARARAERGG CHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC PVAPAGPTRSTGPAGAARTAGATRMAGVAGAAGVAGSVGMVGTAGSGRVRMIHLGSPADL CCCCCCCCCCCCCCCCHHHCCCHHHHHCCCCCCCCCCCCCEECCCCCCEEEEEECCCCCH TDVWPAAPLPPRAPAADQAAASPAAVGSAGSGSAGSGSGGWGQAETEPDLAGPLLPVASL HHCCCCCCCCCCCCCCCHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH ASAGPGPGPRPRTGRGAGGGS HHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SEPTPRTLPGFTPAAWGLLAATAACALGAVLLRYAELAAFAGAGAAALFTAVAAVARPP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC RVTVTTRVTPAAVTRGDDAALVISIVNHSRWTSPSFALRLPAEPAQPGEVPAEPAEPAEP CEEEEEECCHHHEECCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC GGSVGSDGPEIAVDIRPLRGGASREIVLPLDTAARGVRRIGPPQVHRSDPFGLAHRHQYL CCCCCCCCCEEEEEEEECCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCHHHHHHHC GTSLTLRVRPRAYPLVPPPAAPARDPDGQSGRGASGGLMFHTLREYTPGEDLRLVHWAAS CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECC ARTGTLMVRTHLDPSEPASTVVLDTRRRAYPPGPVGAAVFEDAVDVAASAVLACARNSYG CCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC VRLVTSGGVRMTGRRRSTDAESLLDELADVRPDEGVTLDVLRTLRRGPVGTLVLVTGALD EEEEECCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEEECCCC RDAAAALAPVAHVFGQVIVLRMGPRSEAAALARGRRALGDRPRLRPSAEAVARARAERGG CHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC PVAPAGPTRSTGPAGAARTAGATRMAGVAGAAGVAGSVGMVGTAGSGRVRMIHLGSPADL CCCCCCCCCCCCCCCCHHHCCCHHHHHCCCCCCCCCCCCCEECCCCCCEEEEEECCCCCH TDVWPAAPLPPRAPAADQAAASPAAVGSAGSGSAGSGSGGWGQAETEPDLAGPLLPVASL HHCCCCCCCCCCCCCCCHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH ASAGPGPGPRPRTGRGAGGGS HHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA