| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yeaC [H]
Identifier: 158312491
GI number: 158312491
Start: 736123
End: 737097
Strand: Direct
Name: yeaC [H]
Synonym: Franean1_0634
Alternate gene names: 158312491
Gene position: 736123-737097 (Clockwise)
Preceding gene: 158312489
Following gene: 158312492
Centisome position: 8.2
GC content: 72.82
Gene sequence:
>975_bases ATGACGGTCGAGGCGGATCGGGGCATCCCGTTCGCGGTCGCGTTCGACGACGTGGTGGCGAACGTCGAGCGGGTGATCCG CGGCAAGCGCACCGCTGTCGAGCTCGCGGTGATCTGCCTGTTCGCCGAGGGCCACCTGCTGGTCGAGGACGTCCCCGGCC TGGGCAAGACGACGCTCGCCCGCAGCCTCGCCGCCTCGGTGAACGCGGGCTGCCACCGCATCCAGTTCACCCCCGACCTG CTGCCCGCGGACATCACCGGGACCAACGTCTTCAACCAGCGGGCCGCCGAGTTCACGTTCCGCCCGGGCCCCGTCTTCGC GAACCTCGTCATCGCCGACGAGATCAACCGCGCGTCGCCGAAGACCCAGTCCGCTCTGCTCGAGGTCATGGAGGAGCAGC GCGTCACCGTCGACGGGACCCGCTACCCCGTCCCGCTGCCCTTCATGGTCATCGCCACCCAGAACCCGGTCGACATGGAT GGCACCTACGCCCTCCCCGAGGCCCAGCTCGACCGCTTCCTGATGCGGCTGCGCATCGGCTACCCCACCCTGGACGCCGA GCTGGAGATCCTCGAGGGACGTCAGGTCGGCCGCCGTGTCGAGGACCTCCGCCCGGTGATGCGCGCCGAGGACGTCGTCG CCCACGCCGAGCGCACCCTGGCCGTGCACGTGGCCCCGGCGGTGCGCCGCTACGTCGTGCAGGTTGTCGCCGCCACCCGG ACCAGGCACGACGTACTGCGGCTGGGCGCGAGCCCGCGCGGCAGCGTGGCGCTGCTGCGCGCGGTCCAGGTCCGCGCCGC CTCGGCTGGGCGTGCCTTCGCCACCCCCGACGATGTCAAGGCGCTCGCCGGTCCGGTGCTCGCCCACCGGCTCGTGCTCA GTCCGGAGGCCGAGCTGCGCCGGGTCACCGCCGAGGACGTCGTCGCCGAGGTCCTGGACGCGGTCCCCTCGCCCCGTCGC CTCGTGGGCGCGTGA
Upstream 100 bases:
>100_bases GGCGGCACCCCCCGCCGCCCGCGGCGGGCCGCGCCGGTCGCTCCCCCTCGACCGGCGCGGCCCGCCACATCACGCAGGCC TCACCAGCAGGAGGTTCGGC
Downstream 100 bases:
>100_bases GCGAGCCGACCCCCCGGACGCTGCCGGGGTTCACACCCGCCGCATGGGGACTGCTCGCCGCGACGGCCGCCTGCGCCCTC GGGGCGGTGCTCCTGCGCTA
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MTVEADRGIPFAVAFDDVVANVERVIRGKRTAVELAVICLFAEGHLLVEDVPGLGKTTLARSLAASVNAGCHRIQFTPDL LPADITGTNVFNQRAAEFTFRPGPVFANLVIADEINRASPKTQSALLEVMEEQRVTVDGTRYPVPLPFMVIATQNPVDMD GTYALPEAQLDRFLMRLRIGYPTLDAELEILEGRQVGRRVEDLRPVMRAEDVVAHAERTLAVHVAPAVRRYVVQVVAATR TRHDVLRLGASPRGSVALLRAVQVRAASAGRAFATPDDVKALAGPVLAHRLVLSPEAELRRVTAEDVVAEVLDAVPSPRR LVGA
Sequences:
>Translated_324_residues MTVEADRGIPFAVAFDDVVANVERVIRGKRTAVELAVICLFAEGHLLVEDVPGLGKTTLARSLAASVNAGCHRIQFTPDL LPADITGTNVFNQRAAEFTFRPGPVFANLVIADEINRASPKTQSALLEVMEEQRVTVDGTRYPVPLPFMVIATQNPVDMD GTYALPEAQLDRFLMRLRIGYPTLDAELEILEGRQVGRRVEDLRPVMRAEDVVAHAERTLAVHVAPAVRRYVVQVVAATR TRHDVLRLGASPRGSVALLRAVQVRAASAGRAFATPDDVKALAGPVLAHRLVLSPEAELRRVTAEDVVAEVLDAVPSPRR LVGA >Mature_323_residues TVEADRGIPFAVAFDDVVANVERVIRGKRTAVELAVICLFAEGHLLVEDVPGLGKTTLARSLAASVNAGCHRIQFTPDLL PADITGTNVFNQRAAEFTFRPGPVFANLVIADEINRASPKTQSALLEVMEEQRVTVDGTRYPVPLPFMVIATQNPVDMDG TYALPEAQLDRFLMRLRIGYPTLDAELEILEGRQVGRRVEDLRPVMRAEDVVAHAERTLAVHVAPAVRRYVVQVVAATRT RHDVLRLGASPRGSVALLRAVQVRAASAGRAFATPDDVKALAGPVLAHRLVLSPEAELRRVTAEDVVAEVLDAVPSPRRL VGA
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 35147; Mature: 35016
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVEADRGIPFAVAFDDVVANVERVIRGKRTAVELAVICLFAEGHLLVEDVPGLGKTTLA CCCCCCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHEEEEECCCEEEECCCCCCHHHHH RSLAASVNAGCHRIQFTPDLLPADITGTNVFNQRAAEFTFRPGPVFANLVIADEINRASP HHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHEEECCCCCEEEEEEEECCCCCCC KTQSALLEVMEEQRVTVDGTRYPVPLPFMVIATQNPVDMDGTYALPEAQLDRFLMRLRIG HHHHHHHHHHHHCCEEECCCCCCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHCC YPTLDAELEILEGRQVGRRVEDLRPVMRAEDVVAHAERTLAVHVAPAVRRYVVQVVAATR CCCCCCHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHH TRHDVLRLGASPRGSVALLRAVQVRAASAGRAFATPDDVKALAGPVLAHRLVLSPEAELR HHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH RVTAEDVVAEVLDAVPSPRRLVGA HHHHHHHHHHHHHCCCCCHHHCCC >Mature Secondary Structure TVEADRGIPFAVAFDDVVANVERVIRGKRTAVELAVICLFAEGHLLVEDVPGLGKTTLA CCCCCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHEEEEECCCEEEECCCCCCHHHHH RSLAASVNAGCHRIQFTPDLLPADITGTNVFNQRAAEFTFRPGPVFANLVIADEINRASP HHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHEEECCCCCEEEEEEEECCCCCCC KTQSALLEVMEEQRVTVDGTRYPVPLPFMVIATQNPVDMDGTYALPEAQLDRFLMRLRIG HHHHHHHHHHHHCCEEECCCCCCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHCC YPTLDAELEILEGRQVGRRVEDLRPVMRAEDVVAHAERTLAVHVAPAVRRYVVQVVAATR CCCCCCHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHH TRHDVLRLGASPRGSVALLRAVQVRAASAGRAFATPDDVKALAGPVLAHRLVLSPEAELR HHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH RVTAEDVVAEVLDAVPSPRRLVGA HHHHHHHHHHHHHCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]