| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158312481
Identifier: 158312481
GI number: 158312481
Start: 724258
End: 725325
Strand: Direct
Name: 158312481
Synonym: Franean1_0624
Alternate gene names: NA
Gene position: 724258-725325 (Clockwise)
Preceding gene: 158312480
Following gene: 158312482
Centisome position: 8.06
GC content: 70.97
Gene sequence:
>1068_bases ATGAGCGTCGCACCGGTCTTCTCCAAGGGCCGCGACCTCGACGCCACGGTCGAGGTCCTGCGCCCGTGGCTCGCGGCCCG ATTAGGCGTCGACGACGTCACGCTGGGCGAGCTGACCTATCCGACCGGGGCCGGGGTCTCCAACGAGACGATCCTGCTCG AAGCCCGCTCGGCGGGCCGCGTCGACGACCTGGTCCTGCGGATCGGGCCCAGGCCCGAACACCAGATGTTCCTCGACCCC CGGTTCCGGATGCAGTACGACCTGCTGGCCGCCCTGCGCCGCAACGGCTCGGTGCGCGTCCCGGAGACGCTGTGGTTCGA GGACGACGCCGCGCTGCTCGGGCAGCCGTTCTTCGTGATGCGCCGGATGCGCGGCCGGGTGCCGGTCAGCATGCCGGTCT ACAACAAGACGGGGTGGCTGACGGAGGCGACACCCGCCCAGCGGCGGACCCTGTGGGAGAGCGCGATGCGCCAGTTCGCC GCCATCCACGTGATGCCTGTGGACGAGGTGGGCTTCGTCGACCTCGCCGAGCTGGGCGGCACCGGCCCCGAGCAGCAGCT CACCTACTGGAACCGCTTCGCGGCGTGGGCGCTCGAGGACGAGGTGCCCGATGCAGTGCGCACCCTGTTCGAGTGGCTGG CCGCGAACCGGCCCGCCGAGCCCGTGCCGGGCCTGTCCTGGGGCGACGCCCGGATCGGCAACATGATGTTCGGCGACGAC TTCGAGGTCGTCGGCGTCATGGACTGGGAGCAGGCGTCGCTGGCCGGCCCGATGGCCGATCTCGGCTGGTGGCTGCACTT CGACGAGATCCACAGCTCCTTCCAGGGCGTGCCGCGCCTCGACGGCCTCGGCACCCGGCAGGAGACCATCGACCTCTGGG AGGAGCTGACCGGCCGGCGGGTCGAGAACCTGCTCTGGCACGAGGTCTTCGCCTGCGTCAAAACGGCCCTGCTCGGCCTG CACACCCGTCGGTCGATGCGGCTCCCGCTGGCGGGCAGGTCGGAGCGCGGCCCCTACCTGGAACGCGCCTACCGCCTGCT CGACCTCGACCTGGAGGAACTGTCATGA
Upstream 100 bases:
>100_bases TGTACCAGACCCGCACGGACCGGGTCATCCCGGTCGTCGTCCTCACCCCGTCCTGAGAAGCCGGCCTGCTGCCGCGACCG CGATGAAAGGAGCAGTACGG
Downstream 100 bases:
>100_bases GCATCCCGGGTGGCCCCGCGCCATGGGACGAGGAGGTCGCGCGATCGCCTGAGTGGCTCACCGCGGTACTGGGTGAGTCG TGGCCCGGGGCGGTCGTCAC
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Family Protein; Phosphotransferase Family; Acyl-Co A Dehydrogenase; Acyl-CoA Dehydrogenase; Tyrosine Protein Kinase/Aminoglycoside Phosphotransferase; LOW QUALITY PROTEIN Phosphotransferase; Adenine Phosphoribosyltransferase; Aminoglycoside Phosphotransferase-Like Protein; Acyl-CoA Dehydrogenase Family Member
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MSVAPVFSKGRDLDATVEVLRPWLAARLGVDDVTLGELTYPTGAGVSNETILLEARSAGRVDDLVLRIGPRPEHQMFLDP RFRMQYDLLAALRRNGSVRVPETLWFEDDAALLGQPFFVMRRMRGRVPVSMPVYNKTGWLTEATPAQRRTLWESAMRQFA AIHVMPVDEVGFVDLAELGGTGPEQQLTYWNRFAAWALEDEVPDAVRTLFEWLAANRPAEPVPGLSWGDARIGNMMFGDD FEVVGVMDWEQASLAGPMADLGWWLHFDEIHSSFQGVPRLDGLGTRQETIDLWEELTGRRVENLLWHEVFACVKTALLGL HTRRSMRLPLAGRSERGPYLERAYRLLDLDLEELS
Sequences:
>Translated_355_residues MSVAPVFSKGRDLDATVEVLRPWLAARLGVDDVTLGELTYPTGAGVSNETILLEARSAGRVDDLVLRIGPRPEHQMFLDP RFRMQYDLLAALRRNGSVRVPETLWFEDDAALLGQPFFVMRRMRGRVPVSMPVYNKTGWLTEATPAQRRTLWESAMRQFA AIHVMPVDEVGFVDLAELGGTGPEQQLTYWNRFAAWALEDEVPDAVRTLFEWLAANRPAEPVPGLSWGDARIGNMMFGDD FEVVGVMDWEQASLAGPMADLGWWLHFDEIHSSFQGVPRLDGLGTRQETIDLWEELTGRRVENLLWHEVFACVKTALLGL HTRRSMRLPLAGRSERGPYLERAYRLLDLDLEELS >Mature_354_residues SVAPVFSKGRDLDATVEVLRPWLAARLGVDDVTLGELTYPTGAGVSNETILLEARSAGRVDDLVLRIGPRPEHQMFLDPR FRMQYDLLAALRRNGSVRVPETLWFEDDAALLGQPFFVMRRMRGRVPVSMPVYNKTGWLTEATPAQRRTLWESAMRQFAA IHVMPVDEVGFVDLAELGGTGPEQQLTYWNRFAAWALEDEVPDAVRTLFEWLAANRPAEPVPGLSWGDARIGNMMFGDDF EVVGVMDWEQASLAGPMADLGWWLHFDEIHSSFQGVPRLDGLGTRQETIDLWEELTGRRVENLLWHEVFACVKTALLGLH TRRSMRLPLAGRSERGPYLERAYRLLDLDLEELS
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI211971008, Length=279, Percent_Identity=28.673835125448, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI48976061, Length=279, Percent_Identity=28.673835125448, Blast_Score=82, Evalue=7e-16, Organism=Homo sapiens, GI38505218, Length=270, Percent_Identity=23.7037037037037, Blast_Score=72, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17562446, Length=259, Percent_Identity=25.0965250965251, Blast_Score=81, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40176; Mature: 40045
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVAPVFSKGRDLDATVEVLRPWLAARLGVDDVTLGELTYPTGAGVSNETILLEARSAGR CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCEECCCCCCCCCCEEEEEECCCCC VDDLVLRIGPRPEHQMFLDPRFRMQYDLLAALRRNGSVRVPETLWFEDDAALLGQPFFVM HHHEEEECCCCCCCCEEECCCHHHHHHHHHHHHCCCCEECCCEEEECCCHHHHCCHHHHH RRMRGRVPVSMPVYNKTGWLTEATPAQRRTLWESAMRQFAAIHVMPVDEVGFVDLAELGG HHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCEEHHHHCC TGPEQQLTYWNRFAAWALEDEVPDAVRTLFEWLAANRPAEPVPGLSWGDARIGNMMFGDD CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCEECCC FEVVGVMDWEQASLAGPMADLGWWLHFDEIHSSFQGVPRLDGLGTRQETIDLWEELTGRR CEEEEEECCCHHHHCCCHHHHHHHEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH VENLLWHEVFACVKTALLGLHTRRSMRLPLAGRSERGPYLERAYRLLDLDLEELS HHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHCCCHHHCC >Mature Secondary Structure SVAPVFSKGRDLDATVEVLRPWLAARLGVDDVTLGELTYPTGAGVSNETILLEARSAGR CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCEECCCCCCCCCCEEEEEECCCCC VDDLVLRIGPRPEHQMFLDPRFRMQYDLLAALRRNGSVRVPETLWFEDDAALLGQPFFVM HHHEEEECCCCCCCCEEECCCHHHHHHHHHHHHCCCCEECCCEEEECCCHHHHCCHHHHH RRMRGRVPVSMPVYNKTGWLTEATPAQRRTLWESAMRQFAAIHVMPVDEVGFVDLAELGG HHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCEEHHHHCC TGPEQQLTYWNRFAAWALEDEVPDAVRTLFEWLAANRPAEPVPGLSWGDARIGNMMFGDD CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCEECCC FEVVGVMDWEQASLAGPMADLGWWLHFDEIHSSFQGVPRLDGLGTRQETIDLWEELTGRR CEEEEEECCCHHHHCCCHHHHHHHEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH VENLLWHEVFACVKTALLGLHTRRSMRLPLAGRSERGPYLERAYRLLDLDLEELS HHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA