Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158312473

Identifier: 158312473

GI number: 158312473

Start: 716898

End: 717428

Strand: Direct

Name: 158312473

Synonym: Franean1_0616

Alternate gene names: NA

Gene position: 716898-717428 (Clockwise)

Preceding gene: 158312472

Following gene: 158312474

Centisome position: 7.98

GC content: 77.59

Gene sequence:

>531_bases
GTGACGGCCGGCCCCGCGGCGGCGTCCGCACCGGCCGGCCCGGCGGGGGCGTCCGGCTCGGCCGGCCCGGCGGCGGCGCC
CGAGCCGACGCGGCCGGTACCGGCGCCGGACGAGCGTTCGGCGCCGTACTGGGCGGCCGCGGCGCGGCACGTCCTCACCG
TCGCCCGCTGCGCCCGCTGCTCCACCTACGTCGTGCCGCCGGACCACACCTGCCCGCACTGCGGCAGCACCGATCCCGGG
TTCGCCTTCGAGCCGGTGAGCGGCAGGGGCACCGTGCGCTCCTGGACCGTGGTCCGCCAGTCGTTCCTGCCCGGCTTCCG
CGGCGAAGTGCCCTTCCTCCTCGTCGACGTCGAGCTCGCGGAACAGCCTGAGCTGCGCATCATCGGCCGGCTCCTGGACG
GCCCCGACACCACCCTGCGCATCGGCGCACCGGTGGCGGTGGCCTTCGAGGACGTCGCCGACGGCGTCTCCGTCCCCGCG
TTCGCCCTGGCCGAGTCGAGTGCCACTGGCCCCGGCGAGGTGCGGTCGTGA

Upstream 100 bases:

>100_bases
GGCGGGCTCCCGAGCACGGCGAGCACACCGAGTCCGTGCTGCTCGAGCTCGGCTACACCTGGGAAGAGATAGCCGCCCTC
ACCGAGGCCGGAGCGATCCC

Downstream 100 bases:

>100_bases
GCGCGCGGCCGGGCTCCAAGGGCCAGGTGGCAATCGTCGGCTACGCGCACAGCGACGTCACCCGGCACGCGGGACGTCCG
CTCGGCGCGCTCGCCGTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MTAGPAAASAPAGPAGASGSAGPAAAPEPTRPVPAPDERSAPYWAAAARHVLTVARCARCSTYVVPPDHTCPHCGSTDPG
FAFEPVSGRGTVRSWTVVRQSFLPGFRGEVPFLLVDVELAEQPELRIIGRLLDGPDTTLRIGAPVAVAFEDVADGVSVPA
FALAESSATGPGEVRS

Sequences:

>Translated_176_residues
MTAGPAAASAPAGPAGASGSAGPAAAPEPTRPVPAPDERSAPYWAAAARHVLTVARCARCSTYVVPPDHTCPHCGSTDPG
FAFEPVSGRGTVRSWTVVRQSFLPGFRGEVPFLLVDVELAEQPELRIIGRLLDGPDTTLRIGAPVAVAFEDVADGVSVPA
FALAESSATGPGEVRS
>Mature_175_residues
TAGPAAASAPAGPAGASGSAGPAAAPEPTRPVPAPDERSAPYWAAAARHVLTVARCARCSTYVVPPDHTCPHCGSTDPGF
AFEPVSGRGTVRSWTVVRQSFLPGFRGEVPFLLVDVELAEQPELRIIGRLLDGPDTTLRIGAPVAVAFEDVADGVSVPAF
ALAESSATGPGEVRS

Specific function: Unknown

COG id: COG1545

COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17939; Mature: 17808

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAGPAAASAPAGPAGASGSAGPAAAPEPTRPVPAPDERSAPYWAAAARHVLTVARCARC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
STYVVPPDHTCPHCGSTDPGFAFEPVSGRGTVRSWTVVRQSFLPGFRGEVPFLLVDVELA
CEEEECCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECC
EQPELRIIGRLLDGPDTTLRIGAPVAVAFEDVADGVSVPAFALAESSATGPGEVRS
CCCCCEEHHHHHCCCCCEEEECCCEEEEHHHHHCCCCCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure 
TAGPAAASAPAGPAGASGSAGPAAAPEPTRPVPAPDERSAPYWAAAARHVLTVARCARC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
STYVVPPDHTCPHCGSTDPGFAFEPVSGRGTVRSWTVVRQSFLPGFRGEVPFLLVDVELA
CEEEECCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECC
EQPELRIIGRLLDGPDTTLRIGAPVAVAFEDVADGVSVPAFALAESSATGPGEVRS
CCCCCEEHHHHHCCCCCEEEECCCEEEEHHHHHCCCCCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA