| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158312426
Identifier: 158312426
GI number: 158312426
Start: 655376
End: 655804
Strand: Direct
Name: 158312426
Synonym: Franean1_0569
Alternate gene names: NA
Gene position: 655376-655804 (Clockwise)
Preceding gene: 158312423
Following gene: 158312431
Centisome position: 7.3
GC content: 67.6
Gene sequence:
>429_bases GTGACCGATGCCGATGCCGATGCCGGGGCCGGGGCGTCCAGCGCGAGGCGGTGGTTCACGCCTGTGACGGAACAGCTCAC CCCGGCCGATCTGAAGATCGATGTTTCGCACTCGGCTCGGGTGTACGACTATTTCCTGGGTGGTAAGGACAACTTCCCGG CTGACCGGGAGGCCGCCGAGCAGACGCTGGCCATCTTCCCGGACATGCGGACCGGGGCGCGTGAGAACCGGGCGTTCCTG CACCGCGCGACCCGGAAACTCGTCAGGGAGCTGGGGCTGCGGCAGTTCCTCGACATCGGCACCGGCATCCCGACCTCGCC GAACCTGCACGAGGTCGCGCAGGAGGCCGCCGCGGACGCCCGGATCGTCTACGCCGACAACGATCCGATCGTGCTGGCGC AGTTTCAGGCGCCTCACCAGCATCTTTAG
Upstream 100 bases:
>100_bases GGCGAGCCGCACGCTGTCTGCCGTGGTCTTGCGGGGATGGGGGCCGGCTGCCCGTTAGGGTGATTCCAGATGGTTGCGCC GGAATGTGGGGTTGTGCACG
Downstream 100 bases:
>100_bases GTGGTCGGGGCGACCTCCAGTCCGCACCCTGGTTGCACACGTCGCACGGTTCGGAAGTGGAGTCTACGGAAGCGATGTAC GGAGTGTGATCGTCTAGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MTDADADAGAGASSARRWFTPVTEQLTPADLKIDVSHSARVYDYFLGGKDNFPADREAAEQTLAIFPDMRTGARENRAFL HRATRKLVRELGLRQFLDIGTGIPTSPNLHEVAQEAAADARIVYADNDPIVLAQFQAPHQHL
Sequences:
>Translated_142_residues MTDADADAGAGASSARRWFTPVTEQLTPADLKIDVSHSARVYDYFLGGKDNFPADREAAEQTLAIFPDMRTGARENRAFL HRATRKLVRELGLRQFLDIGTGIPTSPNLHEVAQEAAADARIVYADNDPIVLAQFQAPHQHL >Mature_141_residues TDADADAGAGASSARRWFTPVTEQLTPADLKIDVSHSARVYDYFLGGKDNFPADREAAEQTLAIFPDMRTGARENRAFLH RATRKLVRELGLRQFLDIGTGIPTSPNLHEVAQEAAADARIVYADNDPIVLAQFQAPHQHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15629; Mature: 15497
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDADADAGAGASSARRWFTPVTEQLTPADLKIDVSHSARVYDYFLGGKDNFPADREAAE CCCCCCCCCCCCCHHHHHCCCHHHCCCCCCEEEECCCCCEEEEEEECCCCCCCCCHHHHH QTLAIFPDMRTGARENRAFLHRATRKLVRELGLRQFLDIGTGIPTSPNLHEVAQEAAADA HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC RIVYADNDPIVLAQFQAPHQHL EEEEECCCCEEEEEECCCCCCC >Mature Secondary Structure TDADADAGAGASSARRWFTPVTEQLTPADLKIDVSHSARVYDYFLGGKDNFPADREAAE CCCCCCCCCCCCHHHHHCCCHHHCCCCCCEEEECCCCCEEEEEEECCCCCCCCCHHHHH QTLAIFPDMRTGARENRAFLHRATRKLVRELGLRQFLDIGTGIPTSPNLHEVAQEAAADA HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC RIVYADNDPIVLAQFQAPHQHL EEEEECCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA