| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is cadI [H]
Identifier: 158312421
GI number: 158312421
Start: 648063
End: 648569
Strand: Direct
Name: cadI [H]
Synonym: Franean1_0564
Alternate gene names: 158312421
Gene position: 648063-648569 (Clockwise)
Preceding gene: 158312419
Following gene: 158312422
Centisome position: 7.22
GC content: 68.64
Gene sequence:
>507_bases ATGGCCAGGGTGCAGTTGGCACTGAACGTGTCCGACGTGGACGCGGCAGTGGAGTTCTACACGAAGCTGTTCGGGGTCGA GCCCGCGAAGCGCCGGCCGGGGTACGCGAACTTCGCCGTCGAGGTGCCGCCGTTGAAGCTGGTGCTGATCGAGAACCCGG ACGCTCGTGGCACTGGGGTGGCGGGGGCGCTGAACCATCTCGGGGTGGAGATCGAGACCTCGGAGGAGGTGTCCGCCGCC GCGACCCGGTTGCAGGACTCGGGGCTGGTGACGGCGGTGGAGGAGAACACGGCCTGCTGCTATGCGTTGCAGGACAAGGT GTGGGTCGATGACCCGGACGGCGCGCCGTGGGAGATCTACACGGTGCTCGCCGACATCGCTGAGAGCACCGGCACGCAGC TGCGCACCGTCGAACCAGGTGACGGTCCGGGTTCCGCGTGTGATTGCGGGCCGGTCTGCGCCCCCAGGGTGACGATCGAA CCGGCACCCGCCGGCGTTACCCGCTGA
Upstream 100 bases:
>100_bases GCCATGCCTCCAGCATGCCTCAGCTATTGACAGCCGTCTATGTATGCGTCCATCGTCGGCTCGACAGGCATAGACCGATG TCGATGTGAAGGTGGTTGTG
Downstream 100 bases:
>100_bases CACCGGACGTGTCGGGCAACGGGGAGAGTCAGCCGCCGCTGGTGCGGCGGCTGGCCGCCGAAACGGTGGGCAGCATGCTG CTCGCCGCGCTGGTCATCGG
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MARVQLALNVSDVDAAVEFYTKLFGVEPAKRRPGYANFAVEVPPLKLVLIENPDARGTGVAGALNHLGVEIETSEEVSAA ATRLQDSGLVTAVEENTACCYALQDKVWVDDPDGAPWEIYTVLADIAESTGTQLRTVEPGDGPGSACDCGPVCAPRVTIE PAPAGVTR
Sequences:
>Translated_168_residues MARVQLALNVSDVDAAVEFYTKLFGVEPAKRRPGYANFAVEVPPLKLVLIENPDARGTGVAGALNHLGVEIETSEEVSAA ATRLQDSGLVTAVEENTACCYALQDKVWVDDPDGAPWEIYTVLADIAESTGTQLRTVEPGDGPGSACDCGPVCAPRVTIE PAPAGVTR >Mature_167_residues ARVQLALNVSDVDAAVEFYTKLFGVEPAKRRPGYANFAVEVPPLKLVLIENPDARGTGVAGALNHLGVEIETSEEVSAAA TRLQDSGLVTAVEENTACCYALQDKVWVDDPDGAPWEIYTVLADIAESTGTQLRTVEPGDGPGSACDCGPVCAPRVTIEP APAGVTR
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yqcK [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: NA
Molecular weight: Translated: 17639; Mature: 17508
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARVQLALNVSDVDAAVEFYTKLFGVEPAKRRPGYANFAVEVPPLKLVLIENPDARGTGV CCEEEEEEECCHHHHHHHHHHHHHCCCHHHCCCCCCEEEEECCCEEEEEEECCCCCCCCH AGALNHLGVEIETSEEVSAAATRLQDSGLVTAVEENTACCYALQDKVWVDDPDGAPWEIY HHHHHHCCEEEECCCHHHHHHHHHCCCCCEEEEECCCEEEEEECCCEEEECCCCCCCHHH TVLADIAESTGTQLRTVEPGDGPGSACDCGPVCAPRVTIEPAPAGVTR HHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCC >Mature Secondary Structure ARVQLALNVSDVDAAVEFYTKLFGVEPAKRRPGYANFAVEVPPLKLVLIENPDARGTGV CEEEEEEECCHHHHHHHHHHHHHCCCHHHCCCCCCEEEEECCCEEEEEEECCCCCCCCH AGALNHLGVEIETSEEVSAAATRLQDSGLVTAVEENTACCYALQDKVWVDDPDGAPWEIY HHHHHHCCEEEECCCHHHHHHHHHCCCCCEEEEECCCEEEEEECCCEEEECCCCCCCHHH TVLADIAESTGTQLRTVEPGDGPGSACDCGPVCAPRVTIEPAPAGVTR HHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972; 11425467 [H]