| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312377
Identifier: 158312377
GI number: 158312377
Start: 603227
End: 603784
Strand: Direct
Name: 158312377
Synonym: Franean1_0518
Alternate gene names: NA
Gene position: 603227-603784 (Clockwise)
Preceding gene: 158312376
Following gene: 158312382
Centisome position: 6.72
GC content: 66.31
Gene sequence:
>558_bases ATGACCACGCCCAGCGAACTTGAGGAACTGCGCCGCGAGGTCCGCTATCTCAGGGACCGGCAAGACATCCTCGACTGCGT CAACAAGCAGTCGCGCGGCCACGACCGGCACGACGCCAACCTGATGACGAGTGTGCTGCACGAGGACGCGATCGACGAGC ACGGACCCGCCGCGCACATCGGCGCGGACTACGGCCCGTGGGCAAACAAGCAGCACTCGGAGGTGTTCGCCAACCATCTC CACAACATCACGACGCATACCTGTGAGATCGAAGGAGACATCGCGCACGCCGAGAGCTATGTCATCGGCACCATGGTCGG CCGCGACGGCAAGACGCTCGCCTTCATGGGCGGCCGCTACCTCGACCGGCTGGAGCGCCGCGACGGTGCCTGGAAGATCG CCCTTCGGCGCTGCACGATCGAATGGGCCTTCACCGCCAACGCCTCGTTCCTGCACTCCGGCGCCTTCAAGGGCTTCCTG AAGGGCACCTGGGACACCACCGACCTGTCCTACGCCCGCCCCCTGCAACTGGACACCGGCCCCGCCGTCCGCTGGTAG
Upstream 100 bases:
>100_bases AGCCGGTCCCGATGGCAGAGCCTCGCGAACGGGCACGGCACCCGGCCCGCAGCTGACGAATCGCGGCACTTCACACCAGT CCACACAGCAGGGGAGCAGC
Downstream 100 bases:
>100_bases GCGATCCGAGCCTTCGAGGAGATCACGGGCGTCGTCCCGCCCCGAGGCGAACATGATCGTGGGACAGGTCCCGACCTCGT GCCGTAACACGAGCAGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MTTPSELEELRREVRYLRDRQDILDCVNKQSRGHDRHDANLMTSVLHEDAIDEHGPAAHIGADYGPWANKQHSEVFANHL HNITTHTCEIEGDIAHAESYVIGTMVGRDGKTLAFMGGRYLDRLERRDGAWKIALRRCTIEWAFTANASFLHSGAFKGFL KGTWDTTDLSYARPLQLDTGPAVRW
Sequences:
>Translated_185_residues MTTPSELEELRREVRYLRDRQDILDCVNKQSRGHDRHDANLMTSVLHEDAIDEHGPAAHIGADYGPWANKQHSEVFANHL HNITTHTCEIEGDIAHAESYVIGTMVGRDGKTLAFMGGRYLDRLERRDGAWKIALRRCTIEWAFTANASFLHSGAFKGFL KGTWDTTDLSYARPLQLDTGPAVRW >Mature_184_residues TTPSELEELRREVRYLRDRQDILDCVNKQSRGHDRHDANLMTSVLHEDAIDEHGPAAHIGADYGPWANKQHSEVFANHLH NITTHTCEIEGDIAHAESYVIGTMVGRDGKTLAFMGGRYLDRLERRDGAWKIALRRCTIEWAFTANASFLHSGAFKGFLK GTWDTTDLSYARPLQLDTGPAVRW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20988; Mature: 20856
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPSELEELRREVRYLRDRQDILDCVNKQSRGHDRHDANLMTSVLHEDAIDEHGPAAHI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEC GADYGPWANKQHSEVFANHLHNITTHTCEIEGDIAHAESYVIGTMVGRDGKTLAFMGGRY CCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHEEEEEEECCCCCEEEEECCHH LDRLERRDGAWKIALRRCTIEWAFTANASFLHSGAFKGFLKGTWDTTDLSYARPLQLDTG HHHHHHCCCCEEEEEEEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCC PAVRW CCCCC >Mature Secondary Structure TTPSELEELRREVRYLRDRQDILDCVNKQSRGHDRHDANLMTSVLHEDAIDEHGPAAHI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEC GADYGPWANKQHSEVFANHLHNITTHTCEIEGDIAHAESYVIGTMVGRDGKTLAFMGGRY CCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHEEEEEEECCCCCEEEEECCHH LDRLERRDGAWKIALRRCTIEWAFTANASFLHSGAFKGFLKGTWDTTDLSYARPLQLDTG HHHHHHCCCCEEEEEEEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCC PAVRW CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA