| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158312376
Identifier: 158312376
GI number: 158312376
Start: 602210
End: 603124
Strand: Direct
Name: 158312376
Synonym: Franean1_0517
Alternate gene names: NA
Gene position: 602210-603124 (Clockwise)
Preceding gene: 158312375
Following gene: 158312377
Centisome position: 6.7
GC content: 72.35
Gene sequence:
>915_bases ATGCGCATCGGACTCACCGGCGGCGCCTCGACCCCCGAGAAGATCATCGACCAGGCGAGAAAGGCGGAAGCCGATGGCTT CCACCACCTGTGGTACGCGAGCGTCGTCCAAGGCGACCCGTTAGCGTCCATGGCGCTCGCGGGCCGCCAGACATCGACGA TCGAGCTCGGCACCGCGGTGCTGCAGACCTACCCGTGTCATCCGCTGCTCCAGGCCCAGCGGGCGGCGTCGGTCACGGCG GCGATGGGCCGGCCGGGCTTCACGCTTGGTCTCGGCCCATCGCACGCGGGACACATCCACGCCGAGTACGGCCTGTCCTA CGACCGGCCGGGCAAGAACACCGAGGACTACCTCCGCATCGTCACCACCCTGCTGCGCGATGGCGGAGCGGACATCACCG GCGAGGAATGGAGCACGCACGTGCGTTCCGGGACCGTACAGCCGGCGCACCCGGTGCCCGTGCTGCTCGCCGCGCTCTCA CCGCGGCTGCTGCGGGTCGCGGGCGAGCACGCCGACGGCGTGATCCTCTGGATGGCGCCCGCGACCGCGATCGAGAAGCA CATCGAGCCGAAGCTGTCGGCCGCGGCGAAGGCGGCGGGCCGCGGCGCGTTGCGGATCGTCGCCGGGCTCCCGGTCGCCG TGCACGACGACGAGTCCGAAGCCCGCGCGGCCGTCGCGAAGAACTCGACGATGTACGCCAGCTCGCCGGCCTACCAGCGG ATCATGGCAATCGGCGGCGCCGATAGCCCCGCGCAGGCCGCGATCGCCGGCGACGAGGCGTCGGTCGAACGGCAGCTGCA CGCGCTGCTCGACGCGGGCGCGACCGACATCTGGGCACAGCCGATCCCGGTCGGCGACGACCCGCGCGCCTCGCTGCGCC GCACCCGCAACCTGCTCGCCGCTCTGGCCCGGTGA
Upstream 100 bases:
>100_bases TATCAGCGCTGACGGGCCGATGACAGCACACCGCACTCCCGCGCGCACCTCCAACGAATCGGTTACGACGCCGATCCCCA CCACTAGATCCGGAGAACGG
Downstream 100 bases:
>100_bases AGAGCCGGTCCCGATGGCAGAGCCTCGCGAACGGGCACGGCACCCGGCCCGCAGCTGACGAATCGCGGCACTTCACACCA GTCCACACAGCAGGGGAGCA
Product: luciferase family protein
Products: NA
Alternate protein names: Luciferase-Like Monooxygenase; Oxidoreductase; Monooxygenase; 5 10-Methylenetetrahydromethanopterin Reductase; FMN Reductase; FMN-Dependent Monooxygenase; Luciferase-Like Monooxygenase Superfamily; FMN-Dependnent Oxidoreductase; Luciferase-Like Monooxygenase Superfamily Protein; Luciferase
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MRIGLTGGASTPEKIIDQARKAEADGFHHLWYASVVQGDPLASMALAGRQTSTIELGTAVLQTYPCHPLLQAQRAASVTA AMGRPGFTLGLGPSHAGHIHAEYGLSYDRPGKNTEDYLRIVTTLLRDGGADITGEEWSTHVRSGTVQPAHPVPVLLAALS PRLLRVAGEHADGVILWMAPATAIEKHIEPKLSAAAKAAGRGALRIVAGLPVAVHDDESEARAAVAKNSTMYASSPAYQR IMAIGGADSPAQAAIAGDEASVERQLHALLDAGATDIWAQPIPVGDDPRASLRRTRNLLAALAR
Sequences:
>Translated_304_residues MRIGLTGGASTPEKIIDQARKAEADGFHHLWYASVVQGDPLASMALAGRQTSTIELGTAVLQTYPCHPLLQAQRAASVTA AMGRPGFTLGLGPSHAGHIHAEYGLSYDRPGKNTEDYLRIVTTLLRDGGADITGEEWSTHVRSGTVQPAHPVPVLLAALS PRLLRVAGEHADGVILWMAPATAIEKHIEPKLSAAAKAAGRGALRIVAGLPVAVHDDESEARAAVAKNSTMYASSPAYQR IMAIGGADSPAQAAIAGDEASVERQLHALLDAGATDIWAQPIPVGDDPRASLRRTRNLLAALAR >Mature_304_residues MRIGLTGGASTPEKIIDQARKAEADGFHHLWYASVVQGDPLASMALAGRQTSTIELGTAVLQTYPCHPLLQAQRAASVTA AMGRPGFTLGLGPSHAGHIHAEYGLSYDRPGKNTEDYLRIVTTLLRDGGADITGEEWSTHVRSGTVQPAHPVPVLLAALS PRLLRVAGEHADGVILWMAPATAIEKHIEPKLSAAAKAAGRGALRIVAGLPVAVHDDESEARAAVAKNSTMYASSPAYQR IMAIGGADSPAQAAIAGDEASVERQLHALLDAGATDIWAQPIPVGDDPRASLRRTRNLLAALAR
Specific function: Unknown
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31873; Mature: 31873
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIGLTGGASTPEKIIDQARKAEADGFHHLWYASVVQGDPLASMALAGRQTSTIELGTAV CEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHH LQTYPCHPLLQAQRAASVTAAMGRPGFTLGLGPSHAGHIHAEYGLSYDRPGKNTEDYLRI HHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCCCCCCCCHHHHHHH VTTLLRDGGADITGEEWSTHVRSGTVQPAHPVPVLLAALSPRLLRVAGEHADGVILWMAP HHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHHHCCCCCEEEEEECC ATAIEKHIEPKLSAAAKAAGRGALRIVAGLPVAVHDDESEARAAVAKNSTMYASSPAYQR HHHHHHHCCHHHHHHHHHCCCCEEEEEECCEEEEECCCHHHHHHHHCCCEEEECCHHHHH IMAIGGADSPAQAAIAGDEASVERQLHALLDAGATDIWAQPIPVGDDPRASLRRTRNLLA HHHCCCCCCCCHHEECCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCHHHHHHHHHHHH ALAR HHCC >Mature Secondary Structure MRIGLTGGASTPEKIIDQARKAEADGFHHLWYASVVQGDPLASMALAGRQTSTIELGTAV CEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHH LQTYPCHPLLQAQRAASVTAAMGRPGFTLGLGPSHAGHIHAEYGLSYDRPGKNTEDYLRI HHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCCCCCCCCHHHHHHH VTTLLRDGGADITGEEWSTHVRSGTVQPAHPVPVLLAALSPRLLRVAGEHADGVILWMAP HHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHHHCCCCCEEEEEECC ATAIEKHIEPKLSAAAKAAGRGALRIVAGLPVAVHDDESEARAAVAKNSTMYASSPAYQR HHHHHHHCCHHHHHHHHHCCCCEEEEEECCEEEEECCCHHHHHHHHCCCEEEECCHHHHH IMAIGGADSPAQAAIAGDEASVERQLHALLDAGATDIWAQPIPVGDDPRASLRRTRNLLA HHHCCCCCCCCHHEECCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCHHHHHHHHHHHH ALAR HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA