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The map label for this gene is tfdA [H]

Identifier: 158312372

GI number: 158312372

Start: 598589

End: 599428

Strand: Direct

Name: tfdA [H]

Synonym: Franean1_0513

Alternate gene names: 158312372

Gene position: 598589-599428 (Clockwise)

Preceding gene: 158312369

Following gene: 158312373

Centisome position: 6.66

GC content: 68.1

Gene sequence:

>840_bases
ATGGCCATCGAGGTCACCAGGCTGGCACCCGAGATCGGTGCCGAGATCAGCGGCTACACGGGACGCGATCTTGTCAACGA
GGCGGCGGCTGCCGCCTGCAAGGCTGCTCTGGACCGGTACGGCGTCCTGGTGTACCGGGAGGTTCATATCGAGGACGGCG
ACCTGGTCCGGTTCAGCCGGCTGCTGGGAGAGGTGGTGGTGCCCAAGGTCAACGACCCCGGCGAACACCCTGAGATCGCC
CGGATCACGCTCGACCCCGAGAAGAGCGTGCTGGCCGGCTATCGGCAGGGGAACTTCCTCTGGCACATCGACGGCGCGAC
CGACGAGCTTCCCCAGAAGGCGACGCTGCTCACCGCCCGCGAGGTCGACCCAGCCGGCGGCGACACGGAGTTCGCCAACA
CCTACGCCGCCTACGAGGCACTCTCCGACGAGGAGAAGGCCGAGATCGCCGACCTCCAAGTGGTTCACAGCTTCGCGATC
GCCCAGCGAATCGCGTACCCCGACGCCGCAGACAAGCAGCGGGCCAGTTGGGAGAAGGTGCCGACGAGGGTGCACCCGCT
CGTGTGGACCCGTGCAAACGGGCGGAAGTCCCTGCTGATCGGAGCGACCGCGGGCATGGTCGTCGGCCGGTCAGAAGATC
GCGGCAGGACACTGCTGGACCGCCTGCTTCAGTGGTCAACCAGCCCGCGGTTCACCCTCCGGCACCAGTGGCGCCGCGGC
GACCTGGTGATCTGGGACAACACCGGCGTGCTCCACCGTGCCCTGCCTTTCGAGCCGACCTCACGCCGGCTGATGCACCG
CACCACGCTCGTCGGCCAGGAGCTCGTCACAGCCCGGTGA

Upstream 100 bases:

>100_bases
GGAGGTGGCCGTCGGGGCAGTGGCGACACGCGAGGTCGGCCGTCTCCAGATGCCTCACCCGGCGGTGTCGCGCCCCTCTC
CCTAGGAGTCGGAGGAAGTC

Downstream 100 bases:

>100_bases
CAGCGCGAGAACACGAAAACCGGAAGGCAGGAAAGCCATGGTAGACGTGCGCCTCGTCACCGACGCACGCATGACAATGG
GCGAAGGACCGGTCTGGGAC

Product: taurine catabolism dioxygenase TauD/TfdA

Products: Aminoacetaldehyde; CO2; H+; Sulfite; Succinate [C]

Alternate protein names: 2,4-D dioxygenase [H]

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MAIEVTRLAPEIGAEISGYTGRDLVNEAAAAACKAALDRYGVLVYREVHIEDGDLVRFSRLLGEVVVPKVNDPGEHPEIA
RITLDPEKSVLAGYRQGNFLWHIDGATDELPQKATLLTAREVDPAGGDTEFANTYAAYEALSDEEKAEIADLQVVHSFAI
AQRIAYPDAADKQRASWEKVPTRVHPLVWTRANGRKSLLIGATAGMVVGRSEDRGRTLLDRLLQWSTSPRFTLRHQWRRG
DLVIWDNTGVLHRALPFEPTSRRLMHRTTLVGQELVTAR

Sequences:

>Translated_279_residues
MAIEVTRLAPEIGAEISGYTGRDLVNEAAAAACKAALDRYGVLVYREVHIEDGDLVRFSRLLGEVVVPKVNDPGEHPEIA
RITLDPEKSVLAGYRQGNFLWHIDGATDELPQKATLLTAREVDPAGGDTEFANTYAAYEALSDEEKAEIADLQVVHSFAI
AQRIAYPDAADKQRASWEKVPTRVHPLVWTRANGRKSLLIGATAGMVVGRSEDRGRTLLDRLLQWSTSPRFTLRHQWRRG
DLVIWDNTGVLHRALPFEPTSRRLMHRTTLVGQELVTAR
>Mature_278_residues
AIEVTRLAPEIGAEISGYTGRDLVNEAAAAACKAALDRYGVLVYREVHIEDGDLVRFSRLLGEVVVPKVNDPGEHPEIAR
ITLDPEKSVLAGYRQGNFLWHIDGATDELPQKATLLTAREVDPAGGDTEFANTYAAYEALSDEEKAEIADLQVVHSFAIA
QRIAYPDAADKQRASWEKVPTRVHPLVWTRANGRKSLLIGATAGMVVGRSEDRGRTLLDRLLQWSTSPRFTLRHQWRRGD
LVIWDNTGVLHRALPFEPTSRRLMHRTTLVGQELVTAR

Specific function: Involved in degradation of the herbicide 2,4- dichlorophenoxyacetic acid (2,4-D). Is also able to degrade 2- methyl-4-chlorophenoxyacetic acid and 3-chlorobenzoic acid [H]

COG id: COG2175

COG function: function code Q; Probable taurine catabolism dioxygenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tfdA dioxygenase family [H]

Homologues:

Organism=Escherichia coli, GI1786565, Length=283, Percent_Identity=28.2685512367491, Blast_Score=94, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6322971, Length=263, Percent_Identity=26.2357414448669, Blast_Score=73, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003819 [H]

Pfam domain/function: PF02668 TauD [H]

EC number: 1.14.11.17 [C]

Molecular weight: Translated: 31038; Mature: 30906

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIEVTRLAPEIGAEISGYTGRDLVNEAAAAACKAALDRYGVLVYREVHIEDGDLVRFSR
CEEEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHH
LLGEVVVPKVNDPGEHPEIARITLDPEKSVLAGYRQGNFLWHIDGATDELPQKATLLTAR
HHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCCCEEEEECCCCCCCCCHHEEEEEE
EVDPAGGDTEFANTYAAYEALSDEEKAEIADLQVVHSFAIAQRIAYPDAADKQRASWEKV
CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
PTRVHPLVWTRANGRKSLLIGATAGMVVGRSEDRGRTLLDRLLQWSTSPRFTLRHQWRRG
CCEECCEEEEECCCCCEEEEEECCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCCC
DLVIWDNTGVLHRALPFEPTSRRLMHRTTLVGQELVTAR
CEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AIEVTRLAPEIGAEISGYTGRDLVNEAAAAACKAALDRYGVLVYREVHIEDGDLVRFSR
EEEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHH
LLGEVVVPKVNDPGEHPEIARITLDPEKSVLAGYRQGNFLWHIDGATDELPQKATLLTAR
HHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCCCEEEEECCCCCCCCCHHEEEEEE
EVDPAGGDTEFANTYAAYEALSDEEKAEIADLQVVHSFAIAQRIAYPDAADKQRASWEKV
CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
PTRVHPLVWTRANGRKSLLIGATAGMVVGRSEDRGRTLLDRLLQWSTSPRFTLRHQWRRG
CCEECCEEEEECCCCCEEEEEECCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCCC
DLVIWDNTGVLHRALPFEPTSRRLMHRTTLVGQELVTAR
CEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Ascorbate. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-Oxoglutarate; O2; Taurine [C]

Specific reaction: 2-Oxoglutarate + O2 + Taurine --> Aminoacetaldehyde + CO2 + H+ + Sulfite + Succinate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8779585 [H]