| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is mdmB [H]
Identifier: 158312366
GI number: 158312366
Start: 588524
End: 589462
Strand: Direct
Name: mdmB [H]
Synonym: Franean1_0507
Alternate gene names: 158312366
Gene position: 588524-589462 (Clockwise)
Preceding gene: 158312362
Following gene: 158312369
Centisome position: 6.55
GC content: 64.86
Gene sequence:
>939_bases ATGACAACGACAGAAGAAGTCAAGTCCAGCGAATCCATGAGATCCTCCACCAGGCAGCTCGACTCCCTCACCGGGCTGCG CTGGGTCGCGGCCCTGATGGTGCTCGTCACGCACGCCGCGTTCCAGCCCGGGCTGCTTCCGTACAGCGGGACCACCGAGG ACATCAAGGCCGTCGTGAAGATGGGCGGCTACATCGGCGTCGGATTCTTCTTCGTGCTGAGCGGGTTTGTGCTCACATGG TCCATGCGCCCCGATGACACGCCGCGGAAGTTCTGGCGCAGACGCTTCTTCAAGATCTACCCGAACCACTTCGTGACGTT CGTGCTGGCCGTCGTGATGATGGTGATACATGACCGCGAACTCGTCGGCATCGTGCCGAACCTGCTGCTGGTGCAGGCCT GGTCGACCGACCTGGACGTCGCGTTCGGCATCAACGACGTGAGCTGGTCGCTGTCGGCCGAGATGCTGTTCTACCGGACG GCAGGGCCACGCTGCTCCAGTGCTCCGCCCGCCCGCCCGCCCGCCCGACCGACCAACCGACCAACCGACACCGATGGTGC CGAGATGCTCGCTGACTCATCGCACGCGGCGCGGATGAGCAGAAGTGATCTCGGTGAGTCAATGCACCGGCGTGCGATGC GAGACCGTGCTCCGTCCGAGGGCCGAGTATGCCCGGAGTCGACCGGCTGGAAAGGAGAGACCGAAGGCGTTCCCGGGCTC GGACACGAGCGAGACCGGGCCCTGCGGCGCCCATGCGCCCTCGTTCGCACCGGCGGGGCGAGGACGGGTGGTCTGGGCGC GTGTTGGGTGCCAGAAGTTGGCTTGGGTTCAGTCCGTGTATCGGACGGGTTTGGGTTGGGTTCTATTGGCCTGGCTGTAT GGGGTGCAGGTCGAAGATCGTGTGGCGGATGTCGTCGATGGTGTGGTCGAGGGCGTTGA
Upstream 100 bases:
>100_bases GGCGGACACCTGCCAGGACCGAGCACGACACACCACAGCCCGACCCGGCGCGGTTGGCCGGCCAGCTCAGATACCTCCAG GCGCCCTTTCGGGAAGGTCT
Downstream 100 bases:
>100_bases TGGCGCTGGTCAGTCGGGCTGCTGCGATGTCGCCGACGGCTCGGGTCAGGGACTGCAGGTGCAGGCCGATCGCGAAGAGG CGTTGGATGACCTGGTCGTG
Product: acyltransferase 3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MTTTEEVKSSESMRSSTRQLDSLTGLRWVAALMVLVTHAAFQPGLLPYSGTTEDIKAVVKMGGYIGVGFFFVLSGFVLTW SMRPDDTPRKFWRRRFFKIYPNHFVTFVLAVVMMVIHDRELVGIVPNLLLVQAWSTDLDVAFGINDVSWSLSAEMLFYRT AGPRCSSAPPARPPARPTNRPTDTDGAEMLADSSHAARMSRSDLGESMHRRAMRDRAPSEGRVCPESTGWKGETEGVPGL GHERDRALRRPCALVRTGGARTGGLGACWVPEVGLGSVRVSDGFGLGSIGLAVWGAGRRSCGGCRRWCGRGR
Sequences:
>Translated_312_residues MTTTEEVKSSESMRSSTRQLDSLTGLRWVAALMVLVTHAAFQPGLLPYSGTTEDIKAVVKMGGYIGVGFFFVLSGFVLTW SMRPDDTPRKFWRRRFFKIYPNHFVTFVLAVVMMVIHDRELVGIVPNLLLVQAWSTDLDVAFGINDVSWSLSAEMLFYRT AGPRCSSAPPARPPARPTNRPTDTDGAEMLADSSHAARMSRSDLGESMHRRAMRDRAPSEGRVCPESTGWKGETEGVPGL GHERDRALRRPCALVRTGGARTGGLGACWVPEVGLGSVRVSDGFGLGSIGLAVWGAGRRSCGGCRRWCGRGR >Mature_311_residues TTTEEVKSSESMRSSTRQLDSLTGLRWVAALMVLVTHAAFQPGLLPYSGTTEDIKAVVKMGGYIGVGFFFVLSGFVLTWS MRPDDTPRKFWRRRFFKIYPNHFVTFVLAVVMMVIHDRELVGIVPNLLLVQAWSTDLDVAFGINDVSWSLSAEMLFYRTA GPRCSSAPPARPPARPTNRPTDTDGAEMLADSSHAARMSRSDLGESMHRRAMRDRAPSEGRVCPESTGWKGETEGVPGLG HERDRALRRPCALVRTGGARTGGLGACWVPEVGLGSVRVSDGFGLGSIGLAVWGAGRRSCGGCRRWCGRGR
Specific function: Catalyzes the acylation of the mycaminose sugar during midecamycin biosynthesis [H]
COG id: COG1835
COG function: function code I; Predicted acyltransferases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyltransferase 3 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002656 [H]
Pfam domain/function: PF01757 Acyl_transf_3 [H]
EC number: NA
Molecular weight: Translated: 34110; Mature: 33978
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTEEVKSSESMRSSTRQLDSLTGLRWVAALMVLVTHAAFQPGLLPYSGTTEDIKAVVK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH MGGYIGVGFFFVLSGFVLTWSMRPDDTPRKFWRRRFFKIYPNHFVTFVLAVVMMVIHDRE HCCHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCH LVGIVPNLLLVQAWSTDLDVAFGINDVSWSLSAEMLFYRTAGPRCSSAPPARPPARPTNR HHHHHHHHHHEECCCCCCEEEECCCCCCHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCC PTDTDGAEMLADSSHAARMSRSDLGESMHRRAMRDRAPSEGRVCPESTGWKGETEGVPGL CCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC GHERDRALRRPCALVRTGGARTGGLGACWVPEVGLGSVRVSDGFGLGSIGLAVWGAGRRS CCHHHHHHHCCHHHHCCCCCCCCCCCEEECCCCCCCCEEECCCCCCCHHHHHHCCCCCCC CGGCRRWCGRGR HHHHHHHHCCCC >Mature Secondary Structure TTTEEVKSSESMRSSTRQLDSLTGLRWVAALMVLVTHAAFQPGLLPYSGTTEDIKAVVK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH MGGYIGVGFFFVLSGFVLTWSMRPDDTPRKFWRRRFFKIYPNHFVTFVLAVVMMVIHDRE HCCHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCH LVGIVPNLLLVQAWSTDLDVAFGINDVSWSLSAEMLFYRTAGPRCSSAPPARPPARPTNR HHHHHHHHHHEECCCCCCEEEECCCCCCHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCC PTDTDGAEMLADSSHAARMSRSDLGESMHRRAMRDRAPSEGRVCPESTGWKGETEGVPGL CCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC GHERDRALRRPCALVRTGGARTGGLGACWVPEVGLGSVRVSDGFGLGSIGLAVWGAGRRS CCHHHHHHHCCHHHHCCCCCCCCCCCEEECCCCCCCCEEECCCCCCCHHHHHHCCCCCCC CGGCRRWCGRGR HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1629172 [H]