| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is acrR [C]
Identifier: 158312327
GI number: 158312327
Start: 551311
End: 551880
Strand: Direct
Name: acrR [C]
Synonym: Franean1_0466
Alternate gene names: 158312327
Gene position: 551311-551880 (Clockwise)
Preceding gene: 158312320
Following gene: 158312332
Centisome position: 6.14
GC content: 67.02
Gene sequence:
>570_bases GTGGCGCGGAACAGACGCGAGGAGATCCTCGACATCGCGCTGGAGATGTTCGCCGAGCACGGCTACCGAGGAACCTCGCT CGATGCCATCGCGCAGCGGGTCGGCCTGACCCGCCAGGGTGTTCTGCACTACTTCTCGAGCAAGGAGAAGCTGCTAACCG AGATCCTCCGGCGCCGCGAGGAACTCGGCCGCGAGCACCTGCTGGCAGGCCACGCACACGAGGACCTCCCACACCAGATG GCCGCCATCGTGGCCCACGATCACCAGCGGCCAGGACTCACCCAGGTCTACGGGGTGCTACTGGGCGAAAGCCTCACGCA CGGCCATCCGGCGCAGGAGTACTTCCGCGGCCACTACGCGATGGTCCGTGAACGCATGGCAGCCGACTTCACTGCGCGGT GGGGTGAGCGCCTTCCCAACGGACTGACCCCACGGGCTGCGGCGACGGCCCTGCTGGCCCTCCTCGACGGTATGCAGCAG CAGTGGCTGCTCGACCGCTCCCAGACCGACCACTCGGAGATCATCCGGGATGTCCTCGCAGTCCTTCTCGGTCTACCTCC CACGGAGTGA
Upstream 100 bases:
>100_bases ACCCCGACCTACTTCCTCGTAGGTAGGTAGACTAGCGGACCAGTCGCATCGTGCACAGTAGGTGTGGGTACCGGCTTCAC CGAGGAGTCGGAGGTCTACG
Downstream 100 bases:
>100_bases CGCCCCATCGGTTTGACCGGGCCGCTCGCCAGATTGAGATCTCCTGTGGATCGGCTCGCGCGATCGTGACCATCTTCTCT AGAAGGCTTGGGCGGGCGAA
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; TetR-Type Transcriptional Regulator; Transcriptional Regulator TetR
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MARNRREEILDIALEMFAEHGYRGTSLDAIAQRVGLTRQGVLHYFSSKEKLLTEILRRREELGREHLLAGHAHEDLPHQM AAIVAHDHQRPGLTQVYGVLLGESLTHGHPAQEYFRGHYAMVRERMAADFTARWGERLPNGLTPRAAATALLALLDGMQQ QWLLDRSQTDHSEIIRDVLAVLLGLPPTE
Sequences:
>Translated_189_residues MARNRREEILDIALEMFAEHGYRGTSLDAIAQRVGLTRQGVLHYFSSKEKLLTEILRRREELGREHLLAGHAHEDLPHQM AAIVAHDHQRPGLTQVYGVLLGESLTHGHPAQEYFRGHYAMVRERMAADFTARWGERLPNGLTPRAAATALLALLDGMQQ QWLLDRSQTDHSEIIRDVLAVLLGLPPTE >Mature_188_residues ARNRREEILDIALEMFAEHGYRGTSLDAIAQRVGLTRQGVLHYFSSKEKLLTEILRRREELGREHLLAGHAHEDLPHQMA AIVAHDHQRPGLTQVYGVLLGESLTHGHPAQEYFRGHYAMVRERMAADFTARWGERLPNGLTPRAAATALLALLDGMQQQ WLLDRSQTDHSEIIRDVLAVLLGLPPTE
Specific function: Potential Regulator Protein For The Acrab Genes. [C]
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21379; Mature: 21248
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARNRREEILDIALEMFAEHGYRGTSLDAIAQRVGLTRQGVLHYFSSKEKLLTEILRRRE CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHH ELGREHLLAGHAHEDLPHQMAAIVAHDHQRPGLTQVYGVLLGESLTHGHPAQEYFRGHYA HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH MVRERMAADFTARWGERLPNGLTPRAAATALLALLDGMQQQWLLDRSQTDHSEIIRDVLA HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH VLLGLPPTE HHHCCCCCC >Mature Secondary Structure ARNRREEILDIALEMFAEHGYRGTSLDAIAQRVGLTRQGVLHYFSSKEKLLTEILRRRE CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHH ELGREHLLAGHAHEDLPHQMAAIVAHDHQRPGLTQVYGVLLGESLTHGHPAQEYFRGHYA HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH MVRERMAADFTARWGERLPNGLTPRAAATALLALLDGMQQQWLLDRSQTDHSEIIRDVLA HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH VLLGLPPTE HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA