| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312320
Identifier: 158312320
GI number: 158312320
Start: 543976
End: 544146
Strand: Direct
Name: 158312320
Synonym: Franean1_0459
Alternate gene names: NA
Gene position: 543976-544146 (Clockwise)
Preceding gene: 158312319
Following gene: 158312327
Centisome position: 6.06
GC content: 63.74
Gene sequence:
>171_bases GTGGCTCACTTTGAACGCAGCCTGGGCTGGCTCATGCTGCACCGCCGCCTGGTCCGTGACTACGAGACCCTCCCCGCCAG CTCCGAAGCGATGATCCATATCGTTATGATCGACAACACGGCCAAGCGCATAACGGGCGAGACCACGCCCACCTGGCGAG ACCCCCGCTAG
Upstream 100 bases:
>100_bases CGGCTACTACACCCGAGCCCGCTGGACCCGACCCCACCTGGACCACAGCACGAACGGAACCCGGACATGAAAAACGATCA CAGCTTCAGGAGCACCAACA
Downstream 100 bases:
>100_bases AACATAAGCCGCAATCAAGACAAATCAAACACCCACTTAGGGTGACCTTGCGCCCGGCGAGCACCTGCGTGGCGATGACG GCCGAGCCAGCGAGTCCGGC
Product: insertion element transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; LOW QUALITY PROTEIN Transposase; Insertion Element Transposase
Number of amino acids: Translated: 56; Mature: 55
Protein sequence:
>56_residues MAHFERSLGWLMLHRRLVRDYETLPASSEAMIHIVMIDNTAKRITGETTPTWRDPR
Sequences:
>Translated_56_residues MAHFERSLGWLMLHRRLVRDYETLPASSEAMIHIVMIDNTAKRITGETTPTWRDPR >Mature_55_residues AHFERSLGWLMLHRRLVRDYETLPASSEAMIHIVMIDNTAKRITGETTPTWRDPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6609; Mature: 6478
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHFERSLGWLMLHRRLVRDYETLPASSEAMIHIVMIDNTAKRITGETTPTWRDPR CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AHFERSLGWLMLHRRLVRDYETLPASSEAMIHIVMIDNTAKRITGETTPTWRDPR CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA