| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is bglB [H]
Identifier: 158312317
GI number: 158312317
Start: 538299
End: 540581
Strand: Direct
Name: bglB [H]
Synonym: Franean1_0456
Alternate gene names: 158312317
Gene position: 538299-540581 (Clockwise)
Preceding gene: 158312316
Following gene: 158312318
Centisome position: 5.99
GC content: 67.5
Gene sequence:
>2283_bases GTGATCGAGGCACAGCATCTTGTTTCGACGCTCGCCCTCGAGGAGAAGGCCGAGCTGGTGTCTGGTGGCGGTCTCTGGGT GACCGCAGAGATACCACACGCCGGGGTGCGGCCGGCGGTGCTCACCGATGGCCCGCACGGGGTCCGCATGACGCGGGATG GCGTTGATACCGGGCATATCGCGAACAGTTTTCCCGCTACGGCATTTCCCACGGCGGCGGCATTGGGATCGTCGTGGAAT GAAGACCTGTTGCGCGAGATCGGCGCGGCGCTCGGCGCCGAGTCCCGTGCCCTCGGCGTGGACGTGCTACTCGGCCCCGG AATCAACATCAAGCGCTCCCCGCTGTGCGGGCGCAACTTCGAGTACTTCGCCGAGGATCCGCTGCTGGCGGGAGCACTCG GGGCGGCGTGGGTCGAGGGTGTGCAGTCACACGGGGTCGGCGCCTCGGTCAAGCACTTCGCGGCGAACAACCAGGAGACC GACCGTATGCGGGTGAGCGCGGACGTCGACGAGCGCACCCTGCGCGAGATCTACCTGCCCGCGTTCGAGCACGTGGTCCG CCAGGCGCACGTAGCCACCGTGATGTGCTCGTACAACCGGATCAACGGCGTGCGCGCTTCCCAGAACCGATGGCTGCTCA CAACGGTACTGCGAGAGGAATGGGGCTTCGAAGGCTACGTTCTCTCGGATTGGGGGGCCGTTCACGATCCAGTCGCCGCT CTGCAGGCCGGCCTTGACCTGGAAATGCCTTCCAGCAGAGGCCGCAGCGCCGCCGAGATCGTTGGTGCCGTCCGCGCCGG CGCGCTCGACGAACGGTGCCTGGATCTGGCCGTAGAACGCCAACTGGCCACGCACCAGCGGCTGTGGCTCGCCCGCGGCG ACGGCATGGAGACGCCCGATTTGCCCGCATACCACGTGCTGGCCCGGCGCGCGGCGGCCGAGGGCGCGGTGCTGCTGAAG AACGATGGCGATCTCCTTCCGCTCGATCCGGCCACCGGCGGCCGGATCGCGGTCGTGGGTGAGTTCGCCCGCAGCCCCCG CTATCAGGGCGCCGGTAGCTCGCAGGTCAATCCGACCCGCCTGGACGACGCGTTGACCGCGATCCTTGCCGCGACCTCAC GCGAGGTCACCTTCGCTCCCGGCTTCCGCCTCGACGGCACCGCCGATCCGGTCCTCCTTGCCGAGGCCGTGCAGGCCGCC CGCGACGCGGAGTCGGTGGTGATGTTCCTCGGTCTGCCGGAGCAGACGGAGTCGGAGGGCTTCGACCGGACCGACCTGGA CCTGCCCGCCATCCAGGTGGAGCTACTCGAAGCCGTCGCTTCGGTCAATTCGCGTGTTGCCGTCATCCTCAGCAACGGTG GTGTCGTGCTGACCGATCCGGTGATCTCGCGCGCCGCCACGCTGCTGGAGATGTGGCTGTCGGGCCAGGCTGGTGGGAGC GCCGCCGCCGACCTCATCTTCGGCCATGCCGCTCCCGCCGGTCGGCTGGCCGAGACCATCCCGCACCGCCTCCAGGACAT CCCGACCTACGTGAACTGGCCTGGCGCCGAAGGGCACGTGAACTACGGAGAACGCCTGTATGTCGGCTACCGATGGTACG ACCGCACCGATGAGGACGTCGCGTTCCCTTTCGGCTTCGGGCTGACCTACACCACCTTCGCCTATTCAGACCTCGCCGTG CACCTCCCCGACCCGGCCAGGCCGGAGGCTCGCGTCGAGGTTGTGGTGACCAACACCGGCAGGCGGGAAGCGGCCGAGGT CGTCCAGCTGTACATCAGCGACCCAGTCGCCGACGTTGATCGCCCGGTGCGTGAACTGCGCGGCTTCCGCAAGGTCCGCG TGGCCCCCGGACACAGCGAACGGGTGGTGATCGAGCTTGACGCCCGTGCGTTCAGCTACTGGAGTACCCGACGCGGGCAG TGGGTCGTCGAACCTGGGGAGTACGGCATCCATGTGGGATCCTCCTCACGCGACCTGCCGATGACCCAGACGATCAACCT GGACATGGCGATGCCGACACCACCGCTCACCGAAGAAAGCACGCTGGCCGAATGGTACGACCATCCGAGTGGTCGACACA TCGTGCGAGAACTCCTGGGCAAGACGATGGGCGCGCAGGACGGCCTGCTGGAGAACCTCGGAACCTGGCAGTTCGTCGCC CAGATGCCACTCACCGCTCTGCTCAAAATGTCCCCATCCGCGGGCACCGAGGCCAAGCCGTTGAAGGACCTGCTGCACGC CGCGAACAATGGAAACGCCGCGCAGCCAACGGCGAACGTCTGA
Upstream 100 bases:
>100_bases AACACAGGCGCGCCTCAGTCGCCCGCGGCGGCCACAGCTGGCTACGCACCCGCCTGCTGTTGACGACCATTCATTTCCAT CCCAAACAGGAAGGCAGCAA
Downstream 100 bases:
>100_bases CTGGATGTTTATGCAGCTCTGGTGACGGTACGTCGCCTTTGAGTACGGCGGCTTCTGCGTGCTTCATGCCGTAGAAGCAC GTTCACGTATCCCGCGGCTG
Product: glycoside hydrolase family 3 protein
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 760; Mature: 760
Protein sequence:
>760_residues MIEAQHLVSTLALEEKAELVSGGGLWVTAEIPHAGVRPAVLTDGPHGVRMTRDGVDTGHIANSFPATAFPTAAALGSSWN EDLLREIGAALGAESRALGVDVLLGPGINIKRSPLCGRNFEYFAEDPLLAGALGAAWVEGVQSHGVGASVKHFAANNQET DRMRVSADVDERTLREIYLPAFEHVVRQAHVATVMCSYNRINGVRASQNRWLLTTVLREEWGFEGYVLSDWGAVHDPVAA LQAGLDLEMPSSRGRSAAEIVGAVRAGALDERCLDLAVERQLATHQRLWLARGDGMETPDLPAYHVLARRAAAEGAVLLK NDGDLLPLDPATGGRIAVVGEFARSPRYQGAGSSQVNPTRLDDALTAILAATSREVTFAPGFRLDGTADPVLLAEAVQAA RDAESVVMFLGLPEQTESEGFDRTDLDLPAIQVELLEAVASVNSRVAVILSNGGVVLTDPVISRAATLLEMWLSGQAGGS AAADLIFGHAAPAGRLAETIPHRLQDIPTYVNWPGAEGHVNYGERLYVGYRWYDRTDEDVAFPFGFGLTYTTFAYSDLAV HLPDPARPEARVEVVVTNTGRREAAEVVQLYISDPVADVDRPVRELRGFRKVRVAPGHSERVVIELDARAFSYWSTRRGQ WVVEPGEYGIHVGSSSRDLPMTQTINLDMAMPTPPLTEESTLAEWYDHPSGRHIVRELLGKTMGAQDGLLENLGTWQFVA QMPLTALLKMSPSAGTEAKPLKDLLHAANNGNAAQPTANV
Sequences:
>Translated_760_residues MIEAQHLVSTLALEEKAELVSGGGLWVTAEIPHAGVRPAVLTDGPHGVRMTRDGVDTGHIANSFPATAFPTAAALGSSWN EDLLREIGAALGAESRALGVDVLLGPGINIKRSPLCGRNFEYFAEDPLLAGALGAAWVEGVQSHGVGASVKHFAANNQET DRMRVSADVDERTLREIYLPAFEHVVRQAHVATVMCSYNRINGVRASQNRWLLTTVLREEWGFEGYVLSDWGAVHDPVAA LQAGLDLEMPSSRGRSAAEIVGAVRAGALDERCLDLAVERQLATHQRLWLARGDGMETPDLPAYHVLARRAAAEGAVLLK NDGDLLPLDPATGGRIAVVGEFARSPRYQGAGSSQVNPTRLDDALTAILAATSREVTFAPGFRLDGTADPVLLAEAVQAA RDAESVVMFLGLPEQTESEGFDRTDLDLPAIQVELLEAVASVNSRVAVILSNGGVVLTDPVISRAATLLEMWLSGQAGGS AAADLIFGHAAPAGRLAETIPHRLQDIPTYVNWPGAEGHVNYGERLYVGYRWYDRTDEDVAFPFGFGLTYTTFAYSDLAV HLPDPARPEARVEVVVTNTGRREAAEVVQLYISDPVADVDRPVRELRGFRKVRVAPGHSERVVIELDARAFSYWSTRRGQ WVVEPGEYGIHVGSSSRDLPMTQTINLDMAMPTPPLTEESTLAEWYDHPSGRHIVRELLGKTMGAQDGLLENLGTWQFVA QMPLTALLKMSPSAGTEAKPLKDLLHAANNGNAAQPTANV >Mature_760_residues MIEAQHLVSTLALEEKAELVSGGGLWVTAEIPHAGVRPAVLTDGPHGVRMTRDGVDTGHIANSFPATAFPTAAALGSSWN EDLLREIGAALGAESRALGVDVLLGPGINIKRSPLCGRNFEYFAEDPLLAGALGAAWVEGVQSHGVGASVKHFAANNQET DRMRVSADVDERTLREIYLPAFEHVVRQAHVATVMCSYNRINGVRASQNRWLLTTVLREEWGFEGYVLSDWGAVHDPVAA LQAGLDLEMPSSRGRSAAEIVGAVRAGALDERCLDLAVERQLATHQRLWLARGDGMETPDLPAYHVLARRAAAEGAVLLK NDGDLLPLDPATGGRIAVVGEFARSPRYQGAGSSQVNPTRLDDALTAILAATSREVTFAPGFRLDGTADPVLLAEAVQAA RDAESVVMFLGLPEQTESEGFDRTDLDLPAIQVELLEAVASVNSRVAVILSNGGVVLTDPVISRAATLLEMWLSGQAGGS AAADLIFGHAAPAGRLAETIPHRLQDIPTYVNWPGAEGHVNYGERLYVGYRWYDRTDEDVAFPFGFGLTYTTFAYSDLAV HLPDPARPEARVEVVVTNTGRREAAEVVQLYISDPVADVDRPVRELRGFRKVRVAPGHSERVVIELDARAFSYWSTRRGQ WVVEPGEYGIHVGSSSRDLPMTQTINLDMAMPTPPLTEESTLAEWYDHPSGRHIVRELLGKTMGAQDGLLENLGTWQFVA QMPLTALLKMSPSAGTEAKPLKDLLHAANNGNAAQPTANV
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=651, Percent_Identity=30.1075268817204, Blast_Score=265, Evalue=9e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 81858; Mature: 81858
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEAQHLVSTLALEEKAELVSGGGLWVTAEIPHAGVRPAVLTDGPHGVRMTRDGVDTGHI CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEECCCCCCEEECCCCCCCCC ANSFPATAFPTAAALGSSWNEDLLREIGAALGAESRALGVDVLLGPGINIKRSPLCGRNF CCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCC EYFAEDPLLAGALGAAWVEGVQSHGVGASVKHFAANNQETDRMRVSADVDERTLREIYLP CHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEEECCCHHHHHHHHHHH AFEHVVRQAHVATVMCSYNRINGVRASQNRWLLTTVLREEWGFEGYVLSDWGAVHDPVAA HHHHHHHHHHHHHEEEECHHCCCEECCCCCEEHHHHHHHHCCCCCEEEECCCCHHHHHHH LQAGLDLEMPSSRGRSAAEIVGAVRAGALDERCLDLAVERQLATHQRLWLARGDGMETPD HHCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCC LPAYHVLARRAAAEGAVLLKNDGDLLPLDPATGGRIAVVGEFARSPRYQGAGSSQVNPTR CCHHHHHHHHHHCCCEEEEECCCCEEECCCCCCCEEEEEEHHHCCCCCCCCCCCCCCCHH LDDALTAILAATSREVTFAPGFRLDGTADPVLLAEAVQAARDAESVVMFLGLPEQTESEG HHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHCCC FDRTDLDLPAIQVELLEAVASVNSRVAVILSNGGVVLTDPVISRAATLLEMWLSGQAGGS CCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCEEEECHHHHHHHHHHHHHHCCCCCCC AAADLIFGHAAPAGRLAETIPHRLQDIPTYVNWPGAEGHVNYGERLYVGYRWYDRTDEDV HHHHHHCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCEEEEEEEEECCCCCCE AFPFGFGLTYTTFAYSDLAVHLPDPARPEARVEVVVTNTGRREAAEVVQLYISDPVADVD EEEECCCCHHHEEEECCEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCHHHHH RPVRELRGFRKVRVAPGHSERVVIELDARAFSYWSTRRGQWVVEPGEYGIHVGSSSRDLP HHHHHHCCCEEEEECCCCCCEEEEEECCCHHHHHHCCCCCEEECCCCCEEEECCCCCCCC MTQTINLDMAMPTPPLTEESTLAEWYDHPSGRHIVRELLGKTMGAQDGLLENLGTWQFVA CEEEEEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHCCCHHHHH QMPLTALLKMSPSAGTEAKPLKDLLHAANNGNAAQPTANV HCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MIEAQHLVSTLALEEKAELVSGGGLWVTAEIPHAGVRPAVLTDGPHGVRMTRDGVDTGHI CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEECCCCCCEEECCCCCCCCC ANSFPATAFPTAAALGSSWNEDLLREIGAALGAESRALGVDVLLGPGINIKRSPLCGRNF CCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCC EYFAEDPLLAGALGAAWVEGVQSHGVGASVKHFAANNQETDRMRVSADVDERTLREIYLP CHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEEECCCHHHHHHHHHHH AFEHVVRQAHVATVMCSYNRINGVRASQNRWLLTTVLREEWGFEGYVLSDWGAVHDPVAA HHHHHHHHHHHHHEEEECHHCCCEECCCCCEEHHHHHHHHCCCCCEEEECCCCHHHHHHH LQAGLDLEMPSSRGRSAAEIVGAVRAGALDERCLDLAVERQLATHQRLWLARGDGMETPD HHCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCC LPAYHVLARRAAAEGAVLLKNDGDLLPLDPATGGRIAVVGEFARSPRYQGAGSSQVNPTR CCHHHHHHHHHHCCCEEEEECCCCEEECCCCCCCEEEEEEHHHCCCCCCCCCCCCCCCHH LDDALTAILAATSREVTFAPGFRLDGTADPVLLAEAVQAARDAESVVMFLGLPEQTESEG HHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHCCC FDRTDLDLPAIQVELLEAVASVNSRVAVILSNGGVVLTDPVISRAATLLEMWLSGQAGGS CCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCEEEECHHHHHHHHHHHHHHCCCCCCC AAADLIFGHAAPAGRLAETIPHRLQDIPTYVNWPGAEGHVNYGERLYVGYRWYDRTDEDV HHHHHHCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCEEEEEEEEECCCCCCE AFPFGFGLTYTTFAYSDLAVHLPDPARPEARVEVVVTNTGRREAAEVVQLYISDPVADVD EEEECCCCHHHEEEECCEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCHHHHH RPVRELRGFRKVRVAPGHSERVVIELDARAFSYWSTRRGQWVVEPGEYGIHVGSSSRDLP HHHHHHCCCEEEEECCCCCCEEEEEECCCHHHHHHCCCCCEEECCCCCEEEECCCCCCCC MTQTINLDMAMPTPPLTEESTLAEWYDHPSGRHIVRELLGKTMGAQDGLLENLGTWQFVA CEEEEEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHCCCHHHHH QMPLTALLKMSPSAGTEAKPLKDLLHAANNGNAAQPTANV HCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2505054 [H]