| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312303
Identifier: 158312303
GI number: 158312303
Start: 520735
End: 521103
Strand: Direct
Name: 158312303
Synonym: Franean1_0440
Alternate gene names: NA
Gene position: 520735-521103 (Clockwise)
Preceding gene: 158312302
Following gene: 158312304
Centisome position: 5.8
GC content: 66.12
Gene sequence:
>369_bases ATGAGGTTTCTCGTCGACGAGAACCTCTCACCGCGGGTCGCCGAACTGCTGCGCGACAAGGGCATCGACACAACACACGT CCTCGAGCACGGGCTTGGCGGTTCCCCGGATACCGAGGTCAGCGCGTTCGCCGTCGCCGAGAGACGTTCGATCATCTCGG CCGACAGCGACTTCACGACTCTGCTCGCACTCAGCCGGGGCACCGCTCCCTCGCTGGTCCTGCTCCGATCCGGCGACCAG CTCAAGCCCGACGCACAAGCCGCCCTGCTGCTGGCCAATCTGCCTGCGCTGGAAGCCGACCTCGAACAGGGCGTCGTCAT ATCGCTCAGCACCACCCACGTACGGGTCCGTCGACTCCCGCTCCGCTGA
Upstream 100 bases:
>100_bases AGCTGCTCGCCGACTATCCGTCGCTCACCCGCGACGACGTGCTCGCCGCTCTCGCGTTCGCGGCGGAGACAATGCCGCAA GAGCGTCCGTTCATCGCCGC
Downstream 100 bases:
>100_bases GTACTGCGCCCCCCGATCCGGCCCGCGGTCTCCGCGCAGATCCCACACTAGGCCGCAATCAACTACGTACCGTAGTCGGG GCGGGCTTTGTGCCCAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MRFLVDENLSPRVAELLRDKGIDTTHVLEHGLGGSPDTEVSAFAVAERRSIISADSDFTTLLALSRGTAPSLVLLRSGDQ LKPDAQAALLLANLPALEADLEQGVVISLSTTHVRVRRLPLR
Sequences:
>Translated_122_residues MRFLVDENLSPRVAELLRDKGIDTTHVLEHGLGGSPDTEVSAFAVAERRSIISADSDFTTLLALSRGTAPSLVLLRSGDQ LKPDAQAALLLANLPALEADLEQGVVISLSTTHVRVRRLPLR >Mature_122_residues MRFLVDENLSPRVAELLRDKGIDTTHVLEHGLGGSPDTEVSAFAVAERRSIISADSDFTTLLALSRGTAPSLVLLRSGDQ LKPDAQAALLLANLPALEADLEQGVVISLSTTHVRVRRLPLR
Specific function: Unknown
COG id: COG4634
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13135; Mature: 13135
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFLVDENLSPRVAELLRDKGIDTTHVLEHGLGGSPDTEVSAFAVAERRSIISADSDFTT CCEEECCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEE LLALSRGTAPSLVLLRSGDQLKPDAQAALLLANLPALEADLEQGVVISLSTTHVRVRRLP EEEECCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCHHHCCCCEEEEEECCEEEEEECC LR CC >Mature Secondary Structure MRFLVDENLSPRVAELLRDKGIDTTHVLEHGLGGSPDTEVSAFAVAERRSIISADSDFTT CCEEECCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEE LLALSRGTAPSLVLLRSGDQLKPDAQAALLLANLPALEADLEQGVVISLSTTHVRVRRLP EEEECCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCHHHCCCCEEEEEECCEEEEEECC LR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA