| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is bglX [H]
Identifier: 158312298
GI number: 158312298
Start: 514801
End: 517170
Strand: Direct
Name: bglX [H]
Synonym: Franean1_0435
Alternate gene names: 158312298
Gene position: 514801-517170 (Clockwise)
Preceding gene: 158312297
Following gene: 158312299
Centisome position: 5.73
GC content: 72.03
Gene sequence:
>2370_bases ATGAGCCCCACCTGGCGCGACGAGCACCTGGAGGCCGGCCACCGGGCCGAGCTGCTGCTGGCCGAGATGACCACCGCCGA GAAATGCCATCAGCTCACCGCCCGGATGGCGTGGTCGCTGGTGAAGGCCGACGGCACCGACGCCGACGGCGCCGAGGACG TGCTGCGCCATCCGCCCGGGCATGTGGCGCAGCTGATCCTCGACGACCCGGCGCAGTTGGCCGCGATGGTCGGCACGATC CAGAAACAGGTGCTGTCCCGTAGCCGGCTCGGAATTCCGGTGCTCTTCCACGCCGAGGCGCTCAGCGGCTTCCTCAACGG TGGGCACATGGTGTTCCCCTCCGGCACAGGGCTCGCCGCCGGATGGAGCCCCGACCTCGTCGAAGAGATGACCGACCTGA TCCGGCGGCAGATGCGCCGCACCGGTCTGATGCACGCGCTGTCACCGGTGCTCGACGTGGCCCTCGACCCGCGGTGGGGA CGCGTGCACGAGACGTTCGGTGAGGACCCGTACCTCTGTGCGGCCTTGGGGGTGGCCTATGTGCGCGGCCTGCAGGGGAC CGACGTCTCGCAGGGCGTGATGGCCACCGGCAAGCACTTCCTGGGATACGCGGCGCCGCCGGGCGGCCTGAACCTGTCGG CCTTCGAGTCCGGCGCCCGGCGCACGCGTGACCTGTTCGCCTATCCGTTCGAGGCGGCGATTCGCCTGGCCGGGCTGCGG TCGGTGATGAACTCGTACGCCGACGTCGACGGCGTACCCGCCGGGGCCTCGCCGGAGGTGCTGCAGGACCTGCTGCGCGA CACGCTCGGCTTCGACGGCTTCGTCTCCTCCGACTACACCACCCTCGAGCAGCTCGTCGACCGGCAGCGGATCGCGAAGG ACGCGGCCGAGGCCGGCCGCCTGGCCATCCGGGCCGGGCTCGACGTCGAGATGCCCAATCCGTACGGGTACGGCGACGTG CTCGCCGCCGAGGTCGAGCGCGGGGTCGTCGACGTGCGGCACGTCGACAACTGCGTCCGCCGGGTCCTGCGGGCGAAGTT CGAGGTCGGGCTCTTCGAGCACCCGTACCCGGTGGAGAGCATCGACGTGGCCGCGGCGGCCCGCGAGGGCGCCGACCTGT CGTTGGAGCTGGCCCGGCGCTCGATCGTGCTCGGCCAGAACAACGGCATCCTGCCCCTGACCCCCGGCGGGCTCGACATC GCCGTCATCGGGCCGCACGCCGACGCGCCGACGTTCCAGTTCCCGACCTATACGTACGTGTCGTGGCGCGAGGCCAACGA GGCCGTGATGCGCGGCGAGCTCGGCACCATGAACGGCGCCGAGGAGACCGTGTCGGCCTGGTATTCGGCCCTGTTCGGAG CGTGGGACGGCGACAGCGTGGCTCCCTCGCTGGCGGCTGAGATCGGTGATCACGCCCGCACGGTCCGGGTCGAGCGCGGC TGCACCCTGACCGAGGATCTAGGTTCTCTCGACCCGGCGGTCGAGGCGGCGCGGGCGGCGGACGTCGTCGTGCTGGCGCT GGGCGGGGCGAGCCTGTGGTTCACGGGGGAGCGGACCGAGGGGGAGGCCAGCGACACCGCGGACATCACCCTGCCGGCGG CGCAGGTGCGGCTGGCCGAGGCAGTGGCGGCCACCGGCACCCCGCTGGCGGTCGTGCTCGTGCAGGGCCGGGCCTACGCG CTGCCGAAGGTCATCCAGGACGCCGCGGCCATCGTCGTCGCCCCGTACGCCGGACCGTTCGGCACCCAGGCGATCGCCGA CGTGCTCTTCGGCGTGGTCAACCCCTGCGGCAAGATGCCGTACAGCCTGCCCCGGCACAGCGGCCAGATCCCGGTCTACC ACCACCAGAAGGCCGGGTCGGGCTACCGCAATCCGTTGCCGCCCAGCGTCTCCCGCCACTATCTCGACCTGGAGGCGACG CCGTTGTGGCCGTTCGCCCATGGGCTGAGCTACACCACGTTCGCGCTGAGCGACCTCGACTGCGGTGCCGACATCGACGC GTACGGCACGGCCCACGTCAGCGCCACCGTCGCCAACACGGGGCCACGGGACGGGGCCACGGTGATGCAGCTCTACCTGC GGGTCAACACCTCACCGGTGACCCGGCCCGCCCAGCAGCTCGCCGGCTTCACCCGGGTCGAGCTGGCCGCCGGCGAGAGC CGCCGCGTCACGTTCGAGATCGACGCCTCGCAACTGGCGTACACCAGTCTCGCCCGCCAGGTGGCGGTCGAGCCGGCCCT GGTGGACGTCTTCGTCGGCCTCGACTCCGACGACCGGTCGCTGGCGGGCTCGTTCGCCGTGGTGGGGTCCGCGCGGGTGG TCGAGGGCGCCGAGCGGTCCTTCCTCTCGCGAGCACGCCCGCACCCATAG
Upstream 100 bases:
>100_bases TCGACACGTCGATCGCCGACTACGTCTGGCTACCCTTCCGGTTCGACGGGGAACGCGCCCTCCTCGACTGGCACGACGAA TGGCGTGTGGAGGACTACCC
Downstream 100 bases:
>100_bases GATCGGCGGGTGGTCTCGACGCCGGACAGCCAGGAGGCGCGCCGCGTCACCATCCAGGACGTGGCACGCGAGGCCGGCGT GTCGGTCTCGGCCGTCTCCA
Product: glycoside hydrolase family 3 protein
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 789; Mature: 788
Protein sequence:
>789_residues MSPTWRDEHLEAGHRAELLLAEMTTAEKCHQLTARMAWSLVKADGTDADGAEDVLRHPPGHVAQLILDDPAQLAAMVGTI QKQVLSRSRLGIPVLFHAEALSGFLNGGHMVFPSGTGLAAGWSPDLVEEMTDLIRRQMRRTGLMHALSPVLDVALDPRWG RVHETFGEDPYLCAALGVAYVRGLQGTDVSQGVMATGKHFLGYAAPPGGLNLSAFESGARRTRDLFAYPFEAAIRLAGLR SVMNSYADVDGVPAGASPEVLQDLLRDTLGFDGFVSSDYTTLEQLVDRQRIAKDAAEAGRLAIRAGLDVEMPNPYGYGDV LAAEVERGVVDVRHVDNCVRRVLRAKFEVGLFEHPYPVESIDVAAAAREGADLSLELARRSIVLGQNNGILPLTPGGLDI AVIGPHADAPTFQFPTYTYVSWREANEAVMRGELGTMNGAEETVSAWYSALFGAWDGDSVAPSLAAEIGDHARTVRVERG CTLTEDLGSLDPAVEAARAADVVVLALGGASLWFTGERTEGEASDTADITLPAAQVRLAEAVAATGTPLAVVLVQGRAYA LPKVIQDAAAIVVAPYAGPFGTQAIADVLFGVVNPCGKMPYSLPRHSGQIPVYHHQKAGSGYRNPLPPSVSRHYLDLEAT PLWPFAHGLSYTTFALSDLDCGADIDAYGTAHVSATVANTGPRDGATVMQLYLRVNTSPVTRPAQQLAGFTRVELAAGES RRVTFEIDASQLAYTSLARQVAVEPALVDVFVGLDSDDRSLAGSFAVVGSARVVEGAERSFLSRARPHP
Sequences:
>Translated_789_residues MSPTWRDEHLEAGHRAELLLAEMTTAEKCHQLTARMAWSLVKADGTDADGAEDVLRHPPGHVAQLILDDPAQLAAMVGTI QKQVLSRSRLGIPVLFHAEALSGFLNGGHMVFPSGTGLAAGWSPDLVEEMTDLIRRQMRRTGLMHALSPVLDVALDPRWG RVHETFGEDPYLCAALGVAYVRGLQGTDVSQGVMATGKHFLGYAAPPGGLNLSAFESGARRTRDLFAYPFEAAIRLAGLR SVMNSYADVDGVPAGASPEVLQDLLRDTLGFDGFVSSDYTTLEQLVDRQRIAKDAAEAGRLAIRAGLDVEMPNPYGYGDV LAAEVERGVVDVRHVDNCVRRVLRAKFEVGLFEHPYPVESIDVAAAAREGADLSLELARRSIVLGQNNGILPLTPGGLDI AVIGPHADAPTFQFPTYTYVSWREANEAVMRGELGTMNGAEETVSAWYSALFGAWDGDSVAPSLAAEIGDHARTVRVERG CTLTEDLGSLDPAVEAARAADVVVLALGGASLWFTGERTEGEASDTADITLPAAQVRLAEAVAATGTPLAVVLVQGRAYA LPKVIQDAAAIVVAPYAGPFGTQAIADVLFGVVNPCGKMPYSLPRHSGQIPVYHHQKAGSGYRNPLPPSVSRHYLDLEAT PLWPFAHGLSYTTFALSDLDCGADIDAYGTAHVSATVANTGPRDGATVMQLYLRVNTSPVTRPAQQLAGFTRVELAAGES RRVTFEIDASQLAYTSLARQVAVEPALVDVFVGLDSDDRSLAGSFAVVGSARVVEGAERSFLSRARPHP >Mature_788_residues SPTWRDEHLEAGHRAELLLAEMTTAEKCHQLTARMAWSLVKADGTDADGAEDVLRHPPGHVAQLILDDPAQLAAMVGTIQ KQVLSRSRLGIPVLFHAEALSGFLNGGHMVFPSGTGLAAGWSPDLVEEMTDLIRRQMRRTGLMHALSPVLDVALDPRWGR VHETFGEDPYLCAALGVAYVRGLQGTDVSQGVMATGKHFLGYAAPPGGLNLSAFESGARRTRDLFAYPFEAAIRLAGLRS VMNSYADVDGVPAGASPEVLQDLLRDTLGFDGFVSSDYTTLEQLVDRQRIAKDAAEAGRLAIRAGLDVEMPNPYGYGDVL AAEVERGVVDVRHVDNCVRRVLRAKFEVGLFEHPYPVESIDVAAAAREGADLSLELARRSIVLGQNNGILPLTPGGLDIA VIGPHADAPTFQFPTYTYVSWREANEAVMRGELGTMNGAEETVSAWYSALFGAWDGDSVAPSLAAEIGDHARTVRVERGC TLTEDLGSLDPAVEAARAADVVVLALGGASLWFTGERTEGEASDTADITLPAAQVRLAEAVAATGTPLAVVLVQGRAYAL PKVIQDAAAIVVAPYAGPFGTQAIADVLFGVVNPCGKMPYSLPRHSGQIPVYHHQKAGSGYRNPLPPSVSRHYLDLEATP LWPFAHGLSYTTFALSDLDCGADIDAYGTAHVSATVANTGPRDGATVMQLYLRVNTSPVTRPAQQLAGFTRVELAAGESR RVTFEIDASQLAYTSLARQVAVEPALVDVFVGLDSDDRSLAGSFAVVGSARVVEGAERSFLSRARPHP
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=769, Percent_Identity=33.9401820546164, Blast_Score=362, Evalue=1e-101,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 84051; Mature: 83920
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPTWRDEHLEAGHRAELLLAEMTTAEKCHQLTARMAWSLVKADGTDADGAEDVLRHPPG CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCC HVAQLILDDPAQLAAMVGTIQKQVLSRSRLGIPVLFHAEALSGFLNGGHMVFPSGTGLAA HHHHEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCEEEECCCCCCCC GWSPDLVEEMTDLIRRQMRRTGLMHALSPVLDVALDPRWGRVHETFGEDPYLCAALGVAY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHH VRGLQGTDVSQGVMATGKHFLGYAAPPGGLNLSAFESGARRTRDLFAYPFEAAIRLAGLR HHCCCCCCCCCCHHHCCCHHEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH SVMNSYADVDGVPAGASPEVLQDLLRDTLGFDGFVSSDYTTLEQLVDRQRIAKDAAEAGR HHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC LAIRAGLDVEMPNPYGYGDVLAAEVERGVVDVRHVDNCVRRVLRAKFEVGLFEHPYPVES EEEEECCEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH IDVAAAAREGADLSLELARRSIVLGQNNGILPLTPGGLDIAVIGPHADAPTFQFPTYTYV HHHHHHHCCCCCCCCEEHHCEEEEECCCCEEEECCCCEEEEEECCCCCCCCEECCCEEEE SWREANEAVMRGELGTMNGAEETVSAWYSALFGAWDGDSVAPSLAAEIGDHARTVRVERG EEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECC CTLTEDLGSLDPAVEAARAADVVVLALGGASLWFTGERTEGEASDTADITLPAAQVRLAE CEEHHHHCCCCHHHHHHHHCCEEEEEECCCEEEEECCCCCCCCCCCCEEEECHHHHHHHH AVAATGTPLAVVLVQGRAYALPKVIQDAAAIVVAPYAGPFGTQAIADVLFGVVNPCGKMP HHHCCCCCEEEEEECCCCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC YSLPRHSGQIPVYHHQKAGSGYRNPLPPSVSRHYLDLEATPLWPFAHGLSYTTFALSDLD CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHCCCEEEEEEECCC CGADIDAYGTAHVSATVANTGPRDGATVMQLYLRVNTSPVTRPAQQLAGFTRVELAAGES CCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHEECCCCCCCHHHHHCCCEEEEEECCCC RRVTFEIDASQLAYTSLARQVAVEPALVDVFVGLDSDDRSLAGSFAVVGSARVVEGAERS CEEEEEECHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHCCCEEEECCHHHHHHHHHH FLSRARPHP HHHHCCCCC >Mature Secondary Structure SPTWRDEHLEAGHRAELLLAEMTTAEKCHQLTARMAWSLVKADGTDADGAEDVLRHPPG CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCC HVAQLILDDPAQLAAMVGTIQKQVLSRSRLGIPVLFHAEALSGFLNGGHMVFPSGTGLAA HHHHEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCEEEECCCCCCCC GWSPDLVEEMTDLIRRQMRRTGLMHALSPVLDVALDPRWGRVHETFGEDPYLCAALGVAY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHH VRGLQGTDVSQGVMATGKHFLGYAAPPGGLNLSAFESGARRTRDLFAYPFEAAIRLAGLR HHCCCCCCCCCCHHHCCCHHEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH SVMNSYADVDGVPAGASPEVLQDLLRDTLGFDGFVSSDYTTLEQLVDRQRIAKDAAEAGR HHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC LAIRAGLDVEMPNPYGYGDVLAAEVERGVVDVRHVDNCVRRVLRAKFEVGLFEHPYPVES EEEEECCEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH IDVAAAAREGADLSLELARRSIVLGQNNGILPLTPGGLDIAVIGPHADAPTFQFPTYTYV HHHHHHHCCCCCCCCEEHHCEEEEECCCCEEEECCCCEEEEEECCCCCCCCEECCCEEEE SWREANEAVMRGELGTMNGAEETVSAWYSALFGAWDGDSVAPSLAAEIGDHARTVRVERG EEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECC CTLTEDLGSLDPAVEAARAADVVVLALGGASLWFTGERTEGEASDTADITLPAAQVRLAE CEEHHHHCCCCHHHHHHHHCCEEEEEECCCEEEEECCCCCCCCCCCCEEEECHHHHHHHH AVAATGTPLAVVLVQGRAYALPKVIQDAAAIVVAPYAGPFGTQAIADVLFGVVNPCGKMP HHHCCCCCEEEEEECCCCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC YSLPRHSGQIPVYHHQKAGSGYRNPLPPSVSRHYLDLEATPLWPFAHGLSYTTFALSDLD CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHCCCEEEEEEECCC CGADIDAYGTAHVSATVANTGPRDGATVMQLYLRVNTSPVTRPAQQLAGFTRVELAAGES CCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHEECCCCCCCHHHHHCCCEEEEEECCCC RRVTFEIDASQLAYTSLARQVAVEPALVDVFVGLDSDDRSLAGSFAVVGSARVVEGAERS CEEEEEECHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHCCCEEEECCHHHHHHHHHH FLSRARPHP HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]