| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312296
Identifier: 158312296
GI number: 158312296
Start: 512058
End: 513767
Strand: Direct
Name: 158312296
Synonym: Franean1_0433
Alternate gene names: NA
Gene position: 512058-513767 (Clockwise)
Preceding gene: 158312295
Following gene: 158312297
Centisome position: 5.7
GC content: 68.89
Gene sequence:
>1710_bases ATGCTGACGCATTTCATCACCGTCGGGCAGGTGCTCGACGCGCCGGGCGGACGAGACGTACTGGAACGGTTCCTGCCGCA GGCCGTCGACCGCGCCGACGTCCGTGAGCTTCTCGTCCTGTTCTTCCTGCGGGTGACCCCGGGGCTGCGCGATGACGAGC AGGCCAGGGCGGCGTTCTGGGCCGAGATCGACGCGCTGATGGAACCGGTCATTCTCCGGCCGCACGCCGCCGCCATCGCG CCATCGGCGGTCGGCGTATCGGCGCCGCACGCGTCGGCGCCGTGGACCGTCGCAGGCTCACCCACGCGGTGGGGGCTGCT GGAGATCCAGCTGAGCGGTCCGTCGGACGGGAACCCGTTCATCGACGTCGAGCTGACCGCCGAGTTCCGGTGCGGCGAGC GGTCCTGGACGGTCGGCGGCTTCTATGACGGCGACGGAACCTACCGGCTGCGGGCGCTCGCCGAACAGGAGGGGACGTGG CAGTTCGTGACCTCCTCCACGACCCCGGCGCTGGACGGGATCGAGGGCGAGGTGACCGTAGGCCCGGCGGCGCCGGGAGC GCACGGGCCGGTCCGGGTGGACGGCTTCCATTTTGCGTACGCGGACGGAACCCGTTACCGGCCGTGGGGGACCACCGCGT ACGCCTGGAACCACCAGGACGACAAGACGCAGGAGCAGACGCTGGAAACGCTGGCCGCGTCGCCCTTCACCAAGCTGCGT ATGTGCCTGTTCCCCAAGCATTTCGTCTTCAACAACGCCGAGCCCGTCCAGTTCCCGTTCCCACGGGTCAACGGCTCCTT CGACCACACGCGGTTCGACGTCGAGTTCTTCGCGCGCCTCGACGAGCAGGTTCGCCGTCTCGGTGAACTCGGCATCGAGG CCGACGTCATCCTCTTCCACCCGTACGACAAATGGGGTTTCTCCGATCTGGGACGGGCGGTGGACGAGCGAGTCGTCAGG TACCTCGTGCGGCGCCTGGCCGGCTACGCGCACGTCTGGTTCTCGCTGGCCAACGAGTACGACGCGGTACCCGGCAAGAC GATCGCGGACTGGGACCGGATCGGTGAGACCCTCACCGCCGAGGACCCGCACGGGCACCCGGTGTCCATCCACAACTTCA TCGAGCACTTCGACCACACCCGGCCGTGGATCACCCACGCCAGCGTCCAGCACGGCCGGGTCGAGGAGGTCACCGGCTGG CGCGAGCGCTGGGGCAAGCCGGTGGTCATCGACGAGACCGGTTACGAGGGCGACCTCGAGTTCGACTGGGGCAACCTGAC CGGCGAGGAGATGCTGCGCCGATTCTGGGAAGGCGCGGTGCGCGGCGGTTACGTCGGTCACGGCGAAACGTACTGGAACG CCGAGGAGAGGATCTGGTGGGCGAAGGGCGGTCAGTTGACCGGCACGAGCCCGCGCCGGATCGGCTTCCTGGCCGAGATC GTCGCCGCCTCACCGACCGGTGTGCTCGAGCCTCTACCGTCCGACTACGACCTGCCGTGGGCCGGTGTCCAGGACGAGTA CCTGGTCAACTACTACGGCCTCGGCCGGCCGAGGGAGCGTCATATCCTCCTGCCCCCGGGCCGCTGGCACGTTGACGTCC TGGACACCTGGGAGTGCACCGTCGAGCGGCTGCCCGGCACGTACGAAACCCTCGCGGTCGTCCCGCTGCCGGCCAAGCCC TACCAAGCCGTGCGGCTGGTGAAGGCCTGA
Upstream 100 bases:
>100_bases CAAAGTGGCCGCGTCCCGGTCCGGCCACGCGGAGTCGTTCGCCATGGTCGAAAACCTGGATCGGGTCCGCGTCGTCGTCC ACCCCCGCTGAGGAGTCTCC
Downstream 100 bases:
>100_bases TGCGGACGTCCTTCACGCCCGGCCAGGTCTGGCTCGACACCGACGGCAAGCGGATCCAGGCCCACGGTGGCTCCCTTCTG CACGTCGACGGCACGTTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 569; Mature: 569
Protein sequence:
>569_residues MLTHFITVGQVLDAPGGRDVLERFLPQAVDRADVRELLVLFFLRVTPGLRDDEQARAAFWAEIDALMEPVILRPHAAAIA PSAVGVSAPHASAPWTVAGSPTRWGLLEIQLSGPSDGNPFIDVELTAEFRCGERSWTVGGFYDGDGTYRLRALAEQEGTW QFVTSSTTPALDGIEGEVTVGPAAPGAHGPVRVDGFHFAYADGTRYRPWGTTAYAWNHQDDKTQEQTLETLAASPFTKLR MCLFPKHFVFNNAEPVQFPFPRVNGSFDHTRFDVEFFARLDEQVRRLGELGIEADVILFHPYDKWGFSDLGRAVDERVVR YLVRRLAGYAHVWFSLANEYDAVPGKTIADWDRIGETLTAEDPHGHPVSIHNFIEHFDHTRPWITHASVQHGRVEEVTGW RERWGKPVVIDETGYEGDLEFDWGNLTGEEMLRRFWEGAVRGGYVGHGETYWNAEERIWWAKGGQLTGTSPRRIGFLAEI VAASPTGVLEPLPSDYDLPWAGVQDEYLVNYYGLGRPRERHILLPPGRWHVDVLDTWECTVERLPGTYETLAVVPLPAKP YQAVRLVKA
Sequences:
>Translated_569_residues MLTHFITVGQVLDAPGGRDVLERFLPQAVDRADVRELLVLFFLRVTPGLRDDEQARAAFWAEIDALMEPVILRPHAAAIA PSAVGVSAPHASAPWTVAGSPTRWGLLEIQLSGPSDGNPFIDVELTAEFRCGERSWTVGGFYDGDGTYRLRALAEQEGTW QFVTSSTTPALDGIEGEVTVGPAAPGAHGPVRVDGFHFAYADGTRYRPWGTTAYAWNHQDDKTQEQTLETLAASPFTKLR MCLFPKHFVFNNAEPVQFPFPRVNGSFDHTRFDVEFFARLDEQVRRLGELGIEADVILFHPYDKWGFSDLGRAVDERVVR YLVRRLAGYAHVWFSLANEYDAVPGKTIADWDRIGETLTAEDPHGHPVSIHNFIEHFDHTRPWITHASVQHGRVEEVTGW RERWGKPVVIDETGYEGDLEFDWGNLTGEEMLRRFWEGAVRGGYVGHGETYWNAEERIWWAKGGQLTGTSPRRIGFLAEI VAASPTGVLEPLPSDYDLPWAGVQDEYLVNYYGLGRPRERHILLPPGRWHVDVLDTWECTVERLPGTYETLAVVPLPAKP YQAVRLVKA >Mature_569_residues MLTHFITVGQVLDAPGGRDVLERFLPQAVDRADVRELLVLFFLRVTPGLRDDEQARAAFWAEIDALMEPVILRPHAAAIA PSAVGVSAPHASAPWTVAGSPTRWGLLEIQLSGPSDGNPFIDVELTAEFRCGERSWTVGGFYDGDGTYRLRALAEQEGTW QFVTSSTTPALDGIEGEVTVGPAAPGAHGPVRVDGFHFAYADGTRYRPWGTTAYAWNHQDDKTQEQTLETLAASPFTKLR MCLFPKHFVFNNAEPVQFPFPRVNGSFDHTRFDVEFFARLDEQVRRLGELGIEADVILFHPYDKWGFSDLGRAVDERVVR YLVRRLAGYAHVWFSLANEYDAVPGKTIADWDRIGETLTAEDPHGHPVSIHNFIEHFDHTRPWITHASVQHGRVEEVTGW RERWGKPVVIDETGYEGDLEFDWGNLTGEEMLRRFWEGAVRGGYVGHGETYWNAEERIWWAKGGQLTGTSPRRIGFLAEI VAASPTGVLEPLPSDYDLPWAGVQDEYLVNYYGLGRPRERHILLPPGRWHVDVLDTWECTVERLPGTYETLAVVPLPAKP YQAVRLVKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63936; Mature: 63936
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTHFITVGQVLDAPGGRDVLERFLPQAVDRADVRELLVLFFLRVTPGLRDDEQARAAFW CCCEEEEHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH AEIDALMEPVILRPHAAAIAPSAVGVSAPHASAPWTVAGSPTRWGLLEIQLSGPSDGNPF HHHHHHHCCEEECCCHHHCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCE IDVELTAEFRCGERSWTVGGFYDGDGTYRLRALAEQEGTWQFVTSSTTPALDGIEGEVTV EEEEEEEEEECCCCCEEECEEECCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCEEEE GPAAPGAHGPVRVDGFHFAYADGTRYRPWGTTAYAWNHQDDKTQEQTLETLAASPFTKLR CCCCCCCCCCEEECCEEEEECCCCEECCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHH MCLFPKHFVFNNAEPVQFPFPRVNGSFDHTRFDVEFFARLDEQVRRLGELGIEADVILFH HHHCCHHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEC PYDKWGFSDLGRAVDERVVRYLVRRLAGYAHVWFSLANEYDAVPGKTIADWDRIGETLTA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEC EDPHGHPVSIHNFIEHFDHTRPWITHASVQHGRVEEVTGWRERWGKPVVIDETGYEGDLE CCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHCCHHHHCCCCEEEECCCCCCCEE FDWGNLTGEEMLRRFWEGAVRGGYVGHGETYWNAEERIWWAKGGQLTGTSPRRIGFLAEI EECCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCEEEEECCCEECCCCCHHHHHHHHH VAASPTGVLEPLPSDYDLPWAGVQDEYLVNYYGLGRPRERHILLPPGRWHVDVLDTWECT HHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCEEEEEECCCHHH VERLPGTYETLAVVPLPAKPYQAVRLVKA HHHCCCCCCEEEEEECCCCCHHHHEEECC >Mature Secondary Structure MLTHFITVGQVLDAPGGRDVLERFLPQAVDRADVRELLVLFFLRVTPGLRDDEQARAAFW CCCEEEEHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH AEIDALMEPVILRPHAAAIAPSAVGVSAPHASAPWTVAGSPTRWGLLEIQLSGPSDGNPF HHHHHHHCCEEECCCHHHCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCE IDVELTAEFRCGERSWTVGGFYDGDGTYRLRALAEQEGTWQFVTSSTTPALDGIEGEVTV EEEEEEEEEECCCCCEEECEEECCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCEEEE GPAAPGAHGPVRVDGFHFAYADGTRYRPWGTTAYAWNHQDDKTQEQTLETLAASPFTKLR CCCCCCCCCCEEECCEEEEECCCCEECCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHH MCLFPKHFVFNNAEPVQFPFPRVNGSFDHTRFDVEFFARLDEQVRRLGELGIEADVILFH HHHCCHHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEC PYDKWGFSDLGRAVDERVVRYLVRRLAGYAHVWFSLANEYDAVPGKTIADWDRIGETLTA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEC EDPHGHPVSIHNFIEHFDHTRPWITHASVQHGRVEEVTGWRERWGKPVVIDETGYEGDLE CCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHCCHHHHCCCCEEEECCCCCCCEE FDWGNLTGEEMLRRFWEGAVRGGYVGHGETYWNAEERIWWAKGGQLTGTSPRRIGFLAEI EECCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCEEEEECCCEECCCCCHHHHHHHHH VAASPTGVLEPLPSDYDLPWAGVQDEYLVNYYGLGRPRERHILLPPGRWHVDVLDTWECT HHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCEEEEEECCCHHH VERLPGTYETLAVVPLPAKPYQAVRLVKA HHHCCCCCCEEEEEECCCCCHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA