Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158312293

Identifier: 158312293

GI number: 158312293

Start: 506431

End: 508965

Strand: Direct

Name: 158312293

Synonym: Franean1_0430

Alternate gene names: NA

Gene position: 506431-508965 (Clockwise)

Preceding gene: 158312292

Following gene: 158312294

Centisome position: 5.64

GC content: 72.98

Gene sequence:

>2535_bases
ATGGTTCAGCCCTGCGCACCTCGTTTCGAACACCGCACCGAGCCCGGCCCGGTGCTCGGCCTCGGCGCACCAGCCCCCCG
GCTCTCCTGGACCGTCACGCGCGCGGAGGAGGGCTGGCGCCAGACGGCCTACGAGGTCCAGGTCGCCGGCAAGGTCTTCA
CCGTGCGCAGCGCCGAGCAGGTGCTGGTCCCATGGCCGGCCCGGCCGTTGCGCTCACGCGAGCGGGCCGAGGTCAAGGTC
CGGGTGGCGTACGGCGATCACTGGAGCCCGTGGAGCGAAGCGGCCACCGTCGAGGCGGGCCTGCTGGACGCGGCCGACTG
GACAGCGCGCTTCATCAGCCCGGTCGACCCGGGCGAACGGGCGCCCGTCGTCGTCGGCCACGTCGAGGTGCCCGGGCCGG
TCCGCAGCGCTCGGCTGTACGCCACCGCCCACGGCATCTACGTACCGTCGATCAACGGCCGCCGCGTCGACGACACCGTC
CTCGCGCCGGGTTGGACATCGTACGAGCACCGGCTGCGCTACCACGTCTACGACGTCACGACCCTGATCCGGCCGGGCGA
GAACGTCCTGGAGTTCGTGCTCGGCAACGGCTGGTACCGCGGACGGCTCGGCTGGACCAACCAGCGCGCGATCTACGGCG
ACCGCCTCGCCCTGCTCGCCCAGCTGGAGATCACCACCTTCGACGGCGCCGTCCGCGTACTGGCGACCGACGGCACCTGG
CATGCCCGGCCGAGCGAGGTGCTGGCCGACGACCTGTACGACGGCCAGACGACCGACCTGCGCCCGCACGACGCACCGGC
GACCGGCGTCGACATCGTCGAGGGCGATCTGACGCGGCTCGTCGCCCCGGACGGCCCTCCGATCCGGCCGACCAGCGTGC
TGCCCGCCCGCAAGGTGTGGACCTCCCCGGCCGGCAAGACGCTCGTCGACTTCGGCCAGAACGCCGTCGGATGGATCCGC
CTGCGCGTCCGGGACCTGCCCGCGGGAACGACGGTCGTGGTCCGCCACGCCGAGGTGCTGGAAGACAAGGAACTGGGCAC
CCGGCCGCTGCGATCGGCCCGCGCCACCGACACCTGGGTGCTGTCGGGCCACGACGAGGTGCTCGAGCCCTCGCTGACGT
TGCACGGCTTCCGCTACGCCGAGGTCACCGGAGTGCCGGACCTGCGCGAGCAGGACATCGCGCTGGTCGTCGTCGGCTCG
GACCTGCGCCGCACCGGCTGGTTCTCCTCCTCGCACGAACAACTGAACCAGCTGCACGAGAACGTCGTCTGGAGCACCCG
CGGCAACTTCGTCGACCTGCCCACCGACTGCCCGCAGCGCGACGAGCGCCTCGGCTGGACCGGCGACATCCAGATCTTCG
GGCCGACCGCGACCTTCCTGTACGACACCGCCGGCCTGCTGCGCTCCTGGCTGGCCGACCTGGCCGCCGAGCAGCGCCCC
GACGGCTCGGTGCCGCACGTCGTCCCCGAAATCGATCGCGCCCCGGAGTTCCGCACGCCCGCGGCGGCCTGGGGCGACGC
CGCCACCGTCGTGCCCTGGACGCTCTACCAGCGCACCGGCGACCTGCAGATGCTCGAACGGCAACTGCCGAGCATGAGCG
CCTGGGTCGACAAGGTCGCCGCCCTGGCCGGCCCGGACCGGCTCTGGCGCGGCGGCTTCCAGTTCGGTGACTGGCTCGAC
CCGACAGCTCCGCCGGAAAACCCCGGCCGGGCCAAGGCCGACCCCGACGTGGTGGCCACCGCCCACTTCGCCCGCTCGTC
GTGGATCGTGGCCGAATCGGCCCGCCTGCTCGGCCGGGCCGCCGACGCGGAGAAATACCGCACGCTGACCGACGAGGTAC
GGGCCGCCTTCGTCCGGGCCTTCGTGACGCCGCAGGGCCGGATCCACTCCGACGCGCAGACCCTGTACGCGCTGGCCATC
GAGTGGGATCTGCTGCCGGAGGCGGAGCAGCGCGTGGCGGCCGGGCACCGGCTGGCCGAGCTCGTGCGCGACGGCGGGTT
CCACATCGCCACCGGCTTCGTCGGCACGCCACTGGTCTGCGACGCCCTCACCAGCACGGGCCACCTCGACGTCGCGTACC
GCCTGTTGTTGCAAACGCAGTGCCCGTCCTGGCTCTACCCGGTCACCATGGGCGCCACCACGGTGTGGGAACGCTGGGAC
AGCATGCGCCCGGACGGCACCATCAACCCGGGGGAGATGACCTCCTTCAACCACTACGCCCTGGGCGCCGTGGCCGACTG
GCTGCACCGCACGGTGGCCGGGCTCGCACCCGCCGCTCCCGGATATCGGCGCCTGCTCGTGCACCCCCGGCTGACGCCGG
AGCTCACCGGCGCTGCGGCCACCCATCTGACCCCGTACGGGAAAGCCTCGGTGTCCTGGCTTCGCTCGGCCGGCCACCTG
CGGCTCGACGTGCACGTGCCGGTCGGCGCGTCGGCCGAGGTGCACGTGCCGGGCGCGGAGCAGCCCGTGACGGTCGGCCA
CGGCGACCACCGCTGGCTCGTGGCTGACCCGGTGTCGCGCTCCGAGGGGCGGTGA

Upstream 100 bases:

>100_bases
GCAGATGGCCGCGCCGGTCGCCGACCCGCGCAAGCAGCGCGAGCGGCGCCGGCTGCGCCTGGCCCTCTGACCTTCCACCC
CTCGTCACGGGAGTCTCTGC

Downstream 100 bases:

>100_bases
CCGATGCCTGAGCCGATCATTGCGGGCTTCTATCCCGACCCGACGGTCTGCCGAGTCGGTGACGACTATTACCTGGCCCA
TTCCAGCTTCGAGTACTTTC

Product: alpha-L-rhamnosidase

Products: NA

Alternate protein names: Alpha-Rhamnosidase; Alfa-L-Rhamnosidase; Rhamnosidase; Glycoside Hydrolase Family; Hydrolase; Exported Rhamnosidase A; Secreted Hydrolase; Exported Rhamnosidase Protein; Rhamnosidase A; Alpha-L-Rhamnosidase Protein; Secreted Protein; Glycolsyl Hydrolase Family; Exported Rhamnosidase; Alpha-L-Rhamnosidase Family; Bacterial Alpha-L-Rhamnosidase Family; Alpha-L-Rhamnosidase N-Terminal Domain-Containing Protein; Glycosyl Hydrolase; Alpha-L-Rhamnosidase Domain Protein

Number of amino acids: Translated: 844; Mature: 844

Protein sequence:

>844_residues
MVQPCAPRFEHRTEPGPVLGLGAPAPRLSWTVTRAEEGWRQTAYEVQVAGKVFTVRSAEQVLVPWPARPLRSRERAEVKV
RVAYGDHWSPWSEAATVEAGLLDAADWTARFISPVDPGERAPVVVGHVEVPGPVRSARLYATAHGIYVPSINGRRVDDTV
LAPGWTSYEHRLRYHVYDVTTLIRPGENVLEFVLGNGWYRGRLGWTNQRAIYGDRLALLAQLEITTFDGAVRVLATDGTW
HARPSEVLADDLYDGQTTDLRPHDAPATGVDIVEGDLTRLVAPDGPPIRPTSVLPARKVWTSPAGKTLVDFGQNAVGWIR
LRVRDLPAGTTVVVRHAEVLEDKELGTRPLRSARATDTWVLSGHDEVLEPSLTLHGFRYAEVTGVPDLREQDIALVVVGS
DLRRTGWFSSSHEQLNQLHENVVWSTRGNFVDLPTDCPQRDERLGWTGDIQIFGPTATFLYDTAGLLRSWLADLAAEQRP
DGSVPHVVPEIDRAPEFRTPAAAWGDAATVVPWTLYQRTGDLQMLERQLPSMSAWVDKVAALAGPDRLWRGGFQFGDWLD
PTAPPENPGRAKADPDVVATAHFARSSWIVAESARLLGRAADAEKYRTLTDEVRAAFVRAFVTPQGRIHSDAQTLYALAI
EWDLLPEAEQRVAAGHRLAELVRDGGFHIATGFVGTPLVCDALTSTGHLDVAYRLLLQTQCPSWLYPVTMGATTVWERWD
SMRPDGTINPGEMTSFNHYALGAVADWLHRTVAGLAPAAPGYRRLLVHPRLTPELTGAAATHLTPYGKASVSWLRSAGHL
RLDVHVPVGASAEVHVPGAEQPVTVGHGDHRWLVADPVSRSEGR

Sequences:

>Translated_844_residues
MVQPCAPRFEHRTEPGPVLGLGAPAPRLSWTVTRAEEGWRQTAYEVQVAGKVFTVRSAEQVLVPWPARPLRSRERAEVKV
RVAYGDHWSPWSEAATVEAGLLDAADWTARFISPVDPGERAPVVVGHVEVPGPVRSARLYATAHGIYVPSINGRRVDDTV
LAPGWTSYEHRLRYHVYDVTTLIRPGENVLEFVLGNGWYRGRLGWTNQRAIYGDRLALLAQLEITTFDGAVRVLATDGTW
HARPSEVLADDLYDGQTTDLRPHDAPATGVDIVEGDLTRLVAPDGPPIRPTSVLPARKVWTSPAGKTLVDFGQNAVGWIR
LRVRDLPAGTTVVVRHAEVLEDKELGTRPLRSARATDTWVLSGHDEVLEPSLTLHGFRYAEVTGVPDLREQDIALVVVGS
DLRRTGWFSSSHEQLNQLHENVVWSTRGNFVDLPTDCPQRDERLGWTGDIQIFGPTATFLYDTAGLLRSWLADLAAEQRP
DGSVPHVVPEIDRAPEFRTPAAAWGDAATVVPWTLYQRTGDLQMLERQLPSMSAWVDKVAALAGPDRLWRGGFQFGDWLD
PTAPPENPGRAKADPDVVATAHFARSSWIVAESARLLGRAADAEKYRTLTDEVRAAFVRAFVTPQGRIHSDAQTLYALAI
EWDLLPEAEQRVAAGHRLAELVRDGGFHIATGFVGTPLVCDALTSTGHLDVAYRLLLQTQCPSWLYPVTMGATTVWERWD
SMRPDGTINPGEMTSFNHYALGAVADWLHRTVAGLAPAAPGYRRLLVHPRLTPELTGAAATHLTPYGKASVSWLRSAGHL
RLDVHVPVGASAEVHVPGAEQPVTVGHGDHRWLVADPVSRSEGR
>Mature_844_residues
MVQPCAPRFEHRTEPGPVLGLGAPAPRLSWTVTRAEEGWRQTAYEVQVAGKVFTVRSAEQVLVPWPARPLRSRERAEVKV
RVAYGDHWSPWSEAATVEAGLLDAADWTARFISPVDPGERAPVVVGHVEVPGPVRSARLYATAHGIYVPSINGRRVDDTV
LAPGWTSYEHRLRYHVYDVTTLIRPGENVLEFVLGNGWYRGRLGWTNQRAIYGDRLALLAQLEITTFDGAVRVLATDGTW
HARPSEVLADDLYDGQTTDLRPHDAPATGVDIVEGDLTRLVAPDGPPIRPTSVLPARKVWTSPAGKTLVDFGQNAVGWIR
LRVRDLPAGTTVVVRHAEVLEDKELGTRPLRSARATDTWVLSGHDEVLEPSLTLHGFRYAEVTGVPDLREQDIALVVVGS
DLRRTGWFSSSHEQLNQLHENVVWSTRGNFVDLPTDCPQRDERLGWTGDIQIFGPTATFLYDTAGLLRSWLADLAAEQRP
DGSVPHVVPEIDRAPEFRTPAAAWGDAATVVPWTLYQRTGDLQMLERQLPSMSAWVDKVAALAGPDRLWRGGFQFGDWLD
PTAPPENPGRAKADPDVVATAHFARSSWIVAESARLLGRAADAEKYRTLTDEVRAAFVRAFVTPQGRIHSDAQTLYALAI
EWDLLPEAEQRVAAGHRLAELVRDGGFHIATGFVGTPLVCDALTSTGHLDVAYRLLLQTQCPSWLYPVTMGATTVWERWD
SMRPDGTINPGEMTSFNHYALGAVADWLHRTVAGLAPAAPGYRRLLVHPRLTPELTGAAATHLTPYGKASVSWLRSAGHL
RLDVHVPVGASAEVHVPGAEQPVTVGHGDHRWLVADPVSRSEGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92776; Mature: 92776

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQPCAPRFEHRTEPGPVLGLGAPAPRLSWTVTRAEEGWRQTAYEVQVAGKVFTVRSAEQ
CCCCCCCHHHCCCCCCCEEECCCCCCCCEEEEECCHHHHHHCEEEEEECCEEEEEECCCE
VLVPWPARPLRSRERAEVKVRVAYGDHWSPWSEAATVEAGLLDAADWTARFISPVDPGER
EEECCCCCCCCCCCCCEEEEEEEECCCCCCCHHCCEEHHCCCCCCHHHHHHCCCCCCCCC
APVVVGHVEVPGPVRSARLYATAHGIYVPSINGRRVDDTVLAPGWTSYEHRLRYHVYDVT
CCEEEEEEECCCCCCCEEEEEEECEEEEECCCCCCCCCEEECCCCCCHHHEEEEEEEEEE
TLIRPGENVLEFVLGNGWYRGRLGWTNQRAIYGDRLALLAQLEITTFDGAVRVLATDGTW
EEECCCHHHHHHHHCCCEEECCCCCCCCCEEECCCEEEEEEEEEEEECCEEEEEEECCCC
HARPSEVLADDLYDGQTTDLRPHDAPATGVDIVEGDLTRLVAPDGPPIRPTSVLPARKVW
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCHHHH
TSPAGKTLVDFGQNAVGWIRLRVRDLPAGTTVVVRHAEVLEDKELGTRPLRSARATDTWV
CCCCCCHHHHCCCCCEEEEEEEEEECCCCCEEEEEEHHHHHHHHCCCCCHHHCCCCCEEE
LSGHDEVLEPSLTLHGFRYAEVTGVPDLREQDIALVVVGSDLRRTGWFSSSHEQLNQLHE
ECCCHHHHCCCEEECCEEEEEECCCCCCCCCCEEEEEECCCCHHCCCCCCCHHHHHHHHH
NVVWSTRGNFVDLPTDCPQRDERLGWTGDIQIFGPTATFLYDTAGLLRSWLADLAAEQRP
HEEEECCCCEEECCCCCCCHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
DGSVPHVVPEIDRAPEFRTPAAAWGDAATVVPWTLYQRTGDLQMLERQLPSMSAWVDKVA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCCHHHHHHHCCHHHHHHHHHH
ALAGPDRLWRGGFQFGDWLDPTAPPENPGRAKADPDVVATAHFARSSWIVAESARLLGRA
HHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHCCCEEEEHHHHHHHHH
ADAEKYRTLTDEVRAAFVRAFVTPQGRIHSDAQTLYALAIEWDLLPEAEQRVAAGHRLAE
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHH
LVRDGGFHIATGFVGTPLVCDALTSTGHLDVAYRLLLQTQCPSWLYPVTMGATTVWERWD
HHHCCCCEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEHHCCHHHHHHHHH
SMRPDGTINPGEMTSFNHYALGAVADWLHRTVAGLAPAAPGYRRLLVHPRLTPELTGAAA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHH
THLTPYGKASVSWLRSAGHLRLDVHVPVGASAEVHVPGAEQPVTVGHGDHRWLVADPVSR
HHCCCCCCHHHHHHHCCCCEEEEEEECCCCCCEEECCCCCCCEEECCCCCEEEEECCCCC
SEGR
CCCC
>Mature Secondary Structure
MVQPCAPRFEHRTEPGPVLGLGAPAPRLSWTVTRAEEGWRQTAYEVQVAGKVFTVRSAEQ
CCCCCCCHHHCCCCCCCEEECCCCCCCCEEEEECCHHHHHHCEEEEEECCEEEEEECCCE
VLVPWPARPLRSRERAEVKVRVAYGDHWSPWSEAATVEAGLLDAADWTARFISPVDPGER
EEECCCCCCCCCCCCCEEEEEEEECCCCCCCHHCCEEHHCCCCCCHHHHHHCCCCCCCCC
APVVVGHVEVPGPVRSARLYATAHGIYVPSINGRRVDDTVLAPGWTSYEHRLRYHVYDVT
CCEEEEEEECCCCCCCEEEEEEECEEEEECCCCCCCCCEEECCCCCCHHHEEEEEEEEEE
TLIRPGENVLEFVLGNGWYRGRLGWTNQRAIYGDRLALLAQLEITTFDGAVRVLATDGTW
EEECCCHHHHHHHHCCCEEECCCCCCCCCEEECCCEEEEEEEEEEEECCEEEEEEECCCC
HARPSEVLADDLYDGQTTDLRPHDAPATGVDIVEGDLTRLVAPDGPPIRPTSVLPARKVW
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCHHHH
TSPAGKTLVDFGQNAVGWIRLRVRDLPAGTTVVVRHAEVLEDKELGTRPLRSARATDTWV
CCCCCCHHHHCCCCCEEEEEEEEEECCCCCEEEEEEHHHHHHHHCCCCCHHHCCCCCEEE
LSGHDEVLEPSLTLHGFRYAEVTGVPDLREQDIALVVVGSDLRRTGWFSSSHEQLNQLHE
ECCCHHHHCCCEEECCEEEEEECCCCCCCCCCEEEEEECCCCHHCCCCCCCHHHHHHHHH
NVVWSTRGNFVDLPTDCPQRDERLGWTGDIQIFGPTATFLYDTAGLLRSWLADLAAEQRP
HEEEECCCCEEECCCCCCCHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
DGSVPHVVPEIDRAPEFRTPAAAWGDAATVVPWTLYQRTGDLQMLERQLPSMSAWVDKVA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCCHHHHHHHCCHHHHHHHHHH
ALAGPDRLWRGGFQFGDWLDPTAPPENPGRAKADPDVVATAHFARSSWIVAESARLLGRA
HHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHCCCEEEEHHHHHHHHH
ADAEKYRTLTDEVRAAFVRAFVTPQGRIHSDAQTLYALAIEWDLLPEAEQRVAAGHRLAE
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHH
LVRDGGFHIATGFVGTPLVCDALTSTGHLDVAYRLLLQTQCPSWLYPVTMGATTVWERWD
HHHCCCCEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEHHCCHHHHHHHHH
SMRPDGTINPGEMTSFNHYALGAVADWLHRTVAGLAPAAPGYRRLLVHPRLTPELTGAAA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHH
THLTPYGKASVSWLRSAGHLRLDVHVPVGASAEVHVPGAEQPVTVGHGDHRWLVADPVSR
HHCCCCCCHHHHHHHCCCCEEEEEEECCCCCCEEECCCCCCCEEECCCCCEEEEECCCCC
SEGR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA