| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is menB [H]
Identifier: 157964036
GI number: 157964036
Start: 5137610
End: 5138512
Strand: Direct
Name: menB [H]
Synonym: Spea_4225
Alternate gene names: 157964036
Gene position: 5137610-5138512 (Clockwise)
Preceding gene: 157964035
Following gene: 157964037
Centisome position: 99.29
GC content: 48.06
Gene sequence:
>903_bases ATGACACAACAAGTATCTGACATTTTTGATCCCGAATTGTGGGATGTTGTTCCAGGATTTGATTTCGAAGATGTTACCTA CCACAGAGCCAAAGATCAGGGCACTGTACGTATTGCCATTAGTCGTCCAGACTGCTTAAATTCATTCCGCCCAAAGACTG TCGATGAGCTTTATATCGCCCTAGACCATGCTCGTCAGTGGTCAGATGTAGGCTGCGTACTGTTAACCGGTAACGGTCCT TCAGCCAAAGGCCAATGGTCTTTCAGTGCCGGTGGCGATCAGCGTATTCGTGGAAAAGATGGCTACAAGTATGAAGGTGC TGAAGAAGGTACGCCGGATGTCGCTCGTATGGGGCGTTTACACATATTAGAAGTACAACGCCTAATCCGCTTTATGCCAA AAGTGGTGATTGCTGTCGTTCCTGGTTGGGCTGTTGGCGGCGGCCATAGCTTACACGTGGTGTGTGACTTAACCCTAGCC TCAAAAGAACACGCGGTATTTAAGCAAACCGACCCAGATGTTGGTAGTTTCGACTCTGGTTACGGTAGTGCTTACCTAGC CAAGATGATTGGTCAAAAACGCGCTCGTGAAATCTTCTTCTTAGGTTTTAACTACACTGCTGAAGAAGCATTTGATATGG GTATGGTTAACCGTGCTATACCGCATCAAGAATTGGAAGTTGAAGCATTAAAGTGGGCCAAAGAGATCAACTCTAAGTCA CCGACTGCAATGCGCATGCTTAAATACGGCTTCAACCTCCCAGATGACGGCTTAGTGGGTCAGCAGCTATTTGCCGGTGA AGCGACTCGCCTCGCTTATGGCACGGAAGAAGCGAGAGAAGGTCGTGACGCATTCCTTGAGAAGCGCGATCAAGACTTCT CCTCTTTCCCGTGGCACTACTAA
Upstream 100 bases:
>100_bases ACAGATCTCAGTTACTACATAAACTAGATTGACCTGAGATCTGATTAAGCCTAGCCTTTAGCGATTATTGTATTTCAGCG ACATAAGAGGCTATAGGCTC
Downstream 100 bases:
>100_bases TAGCAACCAGTATCGCTCCTAGCACTTAACTTGCTTATCTAAACCCATCAGTGAATTTCCTTTATTGATGGGTTTATCCT GCTATATATAATCAAATTAT
Product: naphthoate synthase
Products: NA
Alternate protein names: DHNA-CoA synthase [H]
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MTQQVSDIFDPELWDVVPGFDFEDVTYHRAKDQGTVRIAISRPDCLNSFRPKTVDELYIALDHARQWSDVGCVLLTGNGP SAKGQWSFSAGGDQRIRGKDGYKYEGAEEGTPDVARMGRLHILEVQRLIRFMPKVVIAVVPGWAVGGGHSLHVVCDLTLA SKEHAVFKQTDPDVGSFDSGYGSAYLAKMIGQKRAREIFFLGFNYTAEEAFDMGMVNRAIPHQELEVEALKWAKEINSKS PTAMRMLKYGFNLPDDGLVGQQLFAGEATRLAYGTEEAREGRDAFLEKRDQDFSSFPWHY
Sequences:
>Translated_300_residues MTQQVSDIFDPELWDVVPGFDFEDVTYHRAKDQGTVRIAISRPDCLNSFRPKTVDELYIALDHARQWSDVGCVLLTGNGP SAKGQWSFSAGGDQRIRGKDGYKYEGAEEGTPDVARMGRLHILEVQRLIRFMPKVVIAVVPGWAVGGGHSLHVVCDLTLA SKEHAVFKQTDPDVGSFDSGYGSAYLAKMIGQKRAREIFFLGFNYTAEEAFDMGMVNRAIPHQELEVEALKWAKEINSKS PTAMRMLKYGFNLPDDGLVGQQLFAGEATRLAYGTEEAREGRDAFLEKRDQDFSSFPWHY >Mature_299_residues TQQVSDIFDPELWDVVPGFDFEDVTYHRAKDQGTVRIAISRPDCLNSFRPKTVDELYIALDHARQWSDVGCVLLTGNGPS AKGQWSFSAGGDQRIRGKDGYKYEGAEEGTPDVARMGRLHILEVQRLIRFMPKVVIAVVPGWAVGGGHSLHVVCDLTLAS KEHAVFKQTDPDVGSFDSGYGSAYLAKMIGQKRAREIFFLGFNYTAEEAFDMGMVNRAIPHQELEVEALKWAKEINSKSP TAMRMLKYGFNLPDDGLVGQQLFAGEATRLAYGTEEAREGRDAFLEKRDQDFSSFPWHY
Specific function: Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) [H]
COG id: COG0447
COG function: function code H; Dihydroxynaphthoic acid synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=286, Percent_Identity=28.6713286713287, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI31542718, Length=267, Percent_Identity=28.0898876404494, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI70995211, Length=254, Percent_Identity=28.3464566929134, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI1788597, Length=290, Percent_Identity=45.5172413793103, Blast_Score=247, Evalue=8e-67, Organism=Escherichia coli, GI87082183, Length=257, Percent_Identity=26.8482490272374, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787659, Length=271, Percent_Identity=27.3062730627306, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1787660, Length=265, Percent_Identity=27.5471698113208, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI221142681, Length=270, Percent_Identity=25.9259259259259, Blast_Score=63, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17554946, Length=266, Percent_Identity=27.4436090225564, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI25145438, Length=272, Percent_Identity=26.8382352941176, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17540714, Length=223, Percent_Identity=26.457399103139, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI20129971, Length=264, Percent_Identity=26.5151515151515, Blast_Score=91, Evalue=7e-19, Organism=Drosophila melanogaster, GI24653477, Length=264, Percent_Identity=26.5151515151515, Blast_Score=91, Evalue=7e-19, Organism=Drosophila melanogaster, GI19922422, Length=259, Percent_Identity=27.027027027027, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24653139, Length=287, Percent_Identity=26.8292682926829, Blast_Score=71, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR010198 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.1.3.36 [H]
Molecular weight: Translated: 33595; Mature: 33464
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQQVSDIFDPELWDVVPGFDFEDVTYHRAKDQGTVRIAISRPDCLNSFRPKTVDELYIA CCCCHHHHCCCHHHHHCCCCCCCCCHHHHCCCCCEEEEEEECCHHHHCCCCCCHHHHHHH LDHARQWSDVGCVLLTGNGPSAKGQWSFSAGGDQRIRGKDGYKYEGAEEGTPDVARMGRL HHHHCCCCCCCEEEEECCCCCCCCEEEECCCCCCEECCCCCCEECCCCCCCCHHHHHCCH HILEVQRLIRFMPKVVIAVVPGWAVGGGHSLHVVCDLTLASKEHAVFKQTDPDVGSFDSG HHHHHHHHHHHHHHHHHHCCCCCEECCCCEEEEEEEEEECCCCCCEEECCCCCCCCCCCC YGSAYLAKMIGQKRAREIFFLGFNYTAEEAFDMGMVNRAIPHQELEVEALKWAKEINSKS CCHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC PTAMRMLKYGFNLPDDGLVGQQLFAGEATRLAYGTEEAREGRDAFLEKRDQDFSSFPWHY HHHHHHHHHCCCCCCCCCCCHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TQQVSDIFDPELWDVVPGFDFEDVTYHRAKDQGTVRIAISRPDCLNSFRPKTVDELYIA CCCHHHHCCCHHHHHCCCCCCCCCHHHHCCCCCEEEEEEECCHHHHCCCCCCHHHHHHH LDHARQWSDVGCVLLTGNGPSAKGQWSFSAGGDQRIRGKDGYKYEGAEEGTPDVARMGRL HHHHCCCCCCCEEEEECCCCCCCCEEEECCCCCCEECCCCCCEECCCCCCCCHHHHHCCH HILEVQRLIRFMPKVVIAVVPGWAVGGGHSLHVVCDLTLASKEHAVFKQTDPDVGSFDSG HHHHHHHHHHHHHHHHHHCCCCCEECCCCEEEEEEEEEECCCCCCEEECCCCCCCCCCCC YGSAYLAKMIGQKRAREIFFLGFNYTAEEAFDMGMVNRAIPHQELEVEALKWAKEINSKS CCHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC PTAMRMLKYGFNLPDDGLVGQQLFAGEATRLAYGTEEAREGRDAFLEKRDQDFSSFPWHY HHHHHHHHHCCCCCCCCCCCHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]