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The map label for this gene is yibQ [H]

Identifier: 157964031

GI number: 157964031

Start: 5127847

End: 5128602

Strand: Direct

Name: yibQ [H]

Synonym: Spea_4220

Alternate gene names: 157964031

Gene position: 5127847-5128602 (Clockwise)

Preceding gene: 157964030

Following gene: 157964035

Centisome position: 99.1

GC content: 43.12

Gene sequence:

>756_bases
GTGCGCTATTTTCTATTATTGATATTTTTGTTGTTACCGAGCGCTAGTGTATTCGCCAGCCAAATTGCCATCATCATTGA
TGATATTGGATATCGTCAATCTGATAAAGCAGTGCTGAGCCTGCCAGCCAATATCACTCTTTCTATATTACCGCATACGC
CATTAGGAAAAGATCTCGCCTCAAAGGCCTATATCCAGGGGAATGAGATCTTAGTACACCTACCTATGCAGGCGCTAAAT
GGTAAGACTATTGGACCCGGTGCTCTCACCAATACAATGTCTGAAATCAAGTTCAAGGCCCAAGTTGAGGACTCGATTAA
TAGCGTGCCCCATGCTAGCGGCGCCAACAACCATATGGGCAGTTTCTTAACCCAGTTAAATGAGCCTATGCGCTGGGTAA
TGGAGTCACTACGGCAGCACAATATCTATTTCATCGACAGCATGACGACCAAATATACCCGTGCAGGCATAGTTGCAGAA
TCTATGGGGATACCAATATTAAGAAGGGAGATATTTTTAGATAATGATAGGTCGCAATCAGGATTAGAAAAGCAGTTTAA
GCATGCTATATCATTAGCGCACGCTAAGGGCAAAATAGTTGTTATTGCACACCCATACCCAGAAACAATCGCTTTCCTTA
CCAAAAACTTACAGCGTTTGGCGAATGCAAATATCGAGTTGGTACACACATCGCAACTAGTATCGCCACATGTGAACTCA
GAAGTTTCGGCTAAACAGGTGTTATTGCAGGATTGA

Upstream 100 bases:

>100_bases
TATGCCTATAATCGAGACAAATTCACTCCGTGAGTCCGTTGCACAAGACAAATTAGTCAACTCGGCGATTGCATGGATTA
AAGCAGAAAAATAAAAACCT

Downstream 100 bases:

>100_bases
GATTGATAGATCAGGTAGCAGAGATTTTAACTCCTGCTTATTAGTGACAATCATATCTAAGGTATAGCCATCTAAAACCG
CTAAATAAGCATTCACTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MRYFLLLIFLLLPSASVFASQIAIIIDDIGYRQSDKAVLSLPANITLSILPHTPLGKDLASKAYIQGNEILVHLPMQALN
GKTIGPGALTNTMSEIKFKAQVEDSINSVPHASGANNHMGSFLTQLNEPMRWVMESLRQHNIYFIDSMTTKYTRAGIVAE
SMGIPILRREIFLDNDRSQSGLEKQFKHAISLAHAKGKIVVIAHPYPETIAFLTKNLQRLANANIELVHTSQLVSPHVNS
EVSAKQVLLQD

Sequences:

>Translated_251_residues
MRYFLLLIFLLLPSASVFASQIAIIIDDIGYRQSDKAVLSLPANITLSILPHTPLGKDLASKAYIQGNEILVHLPMQALN
GKTIGPGALTNTMSEIKFKAQVEDSINSVPHASGANNHMGSFLTQLNEPMRWVMESLRQHNIYFIDSMTTKYTRAGIVAE
SMGIPILRREIFLDNDRSQSGLEKQFKHAISLAHAKGKIVVIAHPYPETIAFLTKNLQRLANANIELVHTSQLVSPHVNS
EVSAKQVLLQD
>Mature_251_residues
MRYFLLLIFLLLPSASVFASQIAIIIDDIGYRQSDKAVLSLPANITLSILPHTPLGKDLASKAYIQGNEILVHLPMQALN
GKTIGPGALTNTMSEIKFKAQVEDSINSVPHASGANNHMGSFLTQLNEPMRWVMESLRQHNIYFIDSMTTKYTRAGIVAE
SMGIPILRREIFLDNDRSQSGLEKQFKHAISLAHAKGKIVVIAHPYPETIAFLTKNLQRLANANIELVHTSQLVSPHVNS
EVSAKQVLLQD

Specific function: Unknown

COG id: COG2861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0755 [H]

Homologues:

Organism=Escherichia coli, GI87082298, Length=237, Percent_Identity=35.4430379746835, Blast_Score=164, Evalue=5e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006837
- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF04748 Polysacc_deac_2 [H]

EC number: NA

Molecular weight: Translated: 27762; Mature: 27762

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYFLLLIFLLLPSASVFASQIAIIIDDIGYRQSDKAVLSLPANITLSILPHTPLGKDLA
CHHHHHHHHHHHCCHHHHHHHHHHEEECCCCCCCCCEEEEECCCEEEEEECCCCCCHHHH
SKAYIQGNEILVHLPMQALNGKTIGPGALTNTMSEIKFKAQVEDSINSVPHASGANNHMG
HHHEECCCEEEEEECHHHHCCCCCCCCHHHHHHHHHEEHHHHHHHHHCCCCCCCCCCHHH
SFLTQLNEPMRWVMESLRQHNIYFIDSMTTKYTRAGIVAESMGIPILRREIFLDNDRSQS
HHHHHHCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCCEEHHEEECCCCCHH
GLEKQFKHAISLAHAKGKIVVIAHPYPETIAFLTKNLQRLANANIELVHTSQLVSPHVNS
HHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCHHHCCCCCC
EVSAKQVLLQD
CCCHHHHHCCC
>Mature Secondary Structure
MRYFLLLIFLLLPSASVFASQIAIIIDDIGYRQSDKAVLSLPANITLSILPHTPLGKDLA
CHHHHHHHHHHHCCHHHHHHHHHHEEECCCCCCCCCEEEEECCCEEEEEECCCCCCHHHH
SKAYIQGNEILVHLPMQALNGKTIGPGALTNTMSEIKFKAQVEDSINSVPHASGANNHMG
HHHEECCCEEEEEECHHHHCCCCCCCCHHHHHHHHHEEHHHHHHHHHCCCCCCCCCCHHH
SFLTQLNEPMRWVMESLRQHNIYFIDSMTTKYTRAGIVAESMGIPILRREIFLDNDRSQS
HHHHHHCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCCEEHHEEECCCCCHH
GLEKQFKHAISLAHAKGKIVVIAHPYPETIAFLTKNLQRLANANIELVHTSQLVSPHVNS
HHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCHHHCCCCCC
EVSAKQVLLQD
CCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]