Click here to switch to the map view.

The map label for this gene is ctpA [H]

Identifier: 157964030

GI number: 157964030

Start: 5126635

End: 5127840

Strand: Direct

Name: ctpA [H]

Synonym: Spea_4219

Alternate gene names: 157964030

Gene position: 5126635-5127840 (Clockwise)

Preceding gene: 157964029

Following gene: 157964031

Centisome position: 99.07

GC content: 44.28

Gene sequence:

>1206_bases
ATGTCACTGTACATACGCTATTTTTGTTGCCTCGCGGCGGGGCTCGCTCTGGGTTTGTCTATCACCCTGTCAGGGCAAGA
GCACACGCAACAATATAAGTCTCATATAAGTTATCCAGTTCTTCTCGATATTATCGACACTGTAGAAACTTATTACGTGC
AAAAACTCACTGAAGAGGAGCTTATCGAAGCCGCCATAGAAGGTATTTTCAATAAGCTCGATCCCTACTCAAGCTTCCTC
GACAGACAAACCTTCGCCAGCATGCAAGAAATGAACAATGGTGAGTATTTCGGTTTTGGTGTCGAAATCGCAACAGACAA
CGACCAGATCACCATAGTCACGCCGTTTGCTGAGTCTCCTGCCGAAGCCGCAGGAATAAAACCCGGTGACCGTGTATTAA
AGCTCAATAAGCAGCTGGTTACCGCTGAAAAGCTAGAAAGCATGCTCAATGAGATTAAACAACACAGCTTAAATAACCGA
CCTATCGAGCTTGAAATGGTGAGAGCCAACTCAAACACTCATTACTCTGTCACTCTAAGCCCAACTCTAATTGCCATTCA
CTCAATAGAAGCAGAGATCCTTGATAATAAAATTGGTTATATTCGCCTTTCTAGCTTTCAGGAAAACACGACTCAAGAGC
TGGTAAAGCAGTTGTCTCTCTGGCATCCGCAGCAGCTTAACGGAATTATTCTGGATCTAAGAAATAACCCCGGCGGGCTG
CTAGATCAAGCCATTACGATAGCAGACCTCTTCCTAGATAAAGGCCGCATCGTAGCGACAGAGGGGCGCTTCTTCGACGC
TAACTCTGACTATTACGCCTCACCACAAACCATGGCAACAAATATCCCTATGTCAGTATTAATCAACAAGGGATCGGCCT
CAGCCTCAGAAGTACTCGCCGCCGCACTGCAAGATAATGGTCGAGCACAATTAATAGGACAAACCAGCTTCGGCAAAGGC
ACCATACAAAGTCTGATCCCGACCCTTATGAATGGTAATGCGATTAAGCTCACCATCGCAAAATACACCACTCCAAATGG
CAATGATATTCACTTAAAAGGTATTGAACCAGATATAAAAATTGAATTAGAAGCTGTATCGGATAGTGAAAGTATGCCTA
TAATCGAGACAAATTCACTCCGTGAGTCCGTTGCACAAGACAAATTAGTCAACTCGGCGATTGCATGGATTAAAGCAGAA
AAATAA

Upstream 100 bases:

>100_bases
TGGCCTATACTTTGAGGTAAGGCATAAGGGGCAAGCTGTCGATCCTGCAAGATATTGCAAACGTTAGACCATATAACCCC
TTAAGATATAAGGGGTTAAT

Downstream 100 bases:

>100_bases
AAACCTGTGCGCTATTTTCTATTATTGATATTTTTGTTGTTACCGAGCGCTAGTGTATTCGCCAGCCAAATTGCCATCAT
CATTGATGATATTGGATATC

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MSLYIRYFCCLAAGLALGLSITLSGQEHTQQYKSHISYPVLLDIIDTVETYYVQKLTEEELIEAAIEGIFNKLDPYSSFL
DRQTFASMQEMNNGEYFGFGVEIATDNDQITIVTPFAESPAEAAGIKPGDRVLKLNKQLVTAEKLESMLNEIKQHSLNNR
PIELEMVRANSNTHYSVTLSPTLIAIHSIEAEILDNKIGYIRLSSFQENTTQELVKQLSLWHPQQLNGIILDLRNNPGGL
LDQAITIADLFLDKGRIVATEGRFFDANSDYYASPQTMATNIPMSVLINKGSASASEVLAAALQDNGRAQLIGQTSFGKG
TIQSLIPTLMNGNAIKLTIAKYTTPNGNDIHLKGIEPDIKIELEAVSDSESMPIIETNSLRESVAQDKLVNSAIAWIKAE
K

Sequences:

>Translated_401_residues
MSLYIRYFCCLAAGLALGLSITLSGQEHTQQYKSHISYPVLLDIIDTVETYYVQKLTEEELIEAAIEGIFNKLDPYSSFL
DRQTFASMQEMNNGEYFGFGVEIATDNDQITIVTPFAESPAEAAGIKPGDRVLKLNKQLVTAEKLESMLNEIKQHSLNNR
PIELEMVRANSNTHYSVTLSPTLIAIHSIEAEILDNKIGYIRLSSFQENTTQELVKQLSLWHPQQLNGIILDLRNNPGGL
LDQAITIADLFLDKGRIVATEGRFFDANSDYYASPQTMATNIPMSVLINKGSASASEVLAAALQDNGRAQLIGQTSFGKG
TIQSLIPTLMNGNAIKLTIAKYTTPNGNDIHLKGIEPDIKIELEAVSDSESMPIIETNSLRESVAQDKLVNSAIAWIKAE
K
>Mature_400_residues
SLYIRYFCCLAAGLALGLSITLSGQEHTQQYKSHISYPVLLDIIDTVETYYVQKLTEEELIEAAIEGIFNKLDPYSSFLD
RQTFASMQEMNNGEYFGFGVEIATDNDQITIVTPFAESPAEAAGIKPGDRVLKLNKQLVTAEKLESMLNEIKQHSLNNRP
IELEMVRANSNTHYSVTLSPTLIAIHSIEAEILDNKIGYIRLSSFQENTTQELVKQLSLWHPQQLNGIILDLRNNPGGLL
DQAITIADLFLDKGRIVATEGRFFDANSDYYASPQTMATNIPMSVLINKGSASASEVLAAALQDNGRAQLIGQTSFGKGT
IQSLIPTLMNGNAIKLTIAKYTTPNGNDIHLKGIEPDIKIELEAVSDSESMPIIETNSLRESVAQDKLVNSAIAWIKAEK

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=324, Percent_Identity=27.1604938271605, Blast_Score=109, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 44203; Mature: 44072

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLYIRYFCCLAAGLALGLSITLSGQEHTQQYKSHISYPVLLDIIDTVETYYVQKLTEEE
CCCHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHH
LIEAAIEGIFNKLDPYSSFLDRQTFASMQEMNNGEYFGFGVEIATDNDQITIVTPFAESP
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEEECCCCCC
AEAAGIKPGDRVLKLNKQLVTAEKLESMLNEIKQHSLNNRPIELEMVRANSNTHYSVTLS
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEC
PTLIAIHSIEAEILDNKIGYIRLSSFQENTTQELVKQLSLWHPQQLNGIILDLRNNPGGL
CEEEEEEEHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCH
LDQAITIADLFLDKGRIVATEGRFFDANSDYYASPQTMATNIPMSVLINKGSASASEVLA
HHHHHHHHHHHHCCCCEEEECCEEEECCCCCCCCCCCEECCCCEEEEEECCCCCHHHHHH
AALQDNGRAQLIGQTSFGKGTIQSLIPTLMNGNAIKLTIAKYTTPNGNDIHLKGIEPDIK
HHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEEECCCCCEE
IELEAVSDSESMPIIETNSLRESVAQDKLVNSAIAWIKAEK
EEEEEECCCCCCCEEECHHHHHHHHHHHHHHHHHHEEEECC
>Mature Secondary Structure 
SLYIRYFCCLAAGLALGLSITLSGQEHTQQYKSHISYPVLLDIIDTVETYYVQKLTEEE
CCHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHH
LIEAAIEGIFNKLDPYSSFLDRQTFASMQEMNNGEYFGFGVEIATDNDQITIVTPFAESP
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEEECCCCCC
AEAAGIKPGDRVLKLNKQLVTAEKLESMLNEIKQHSLNNRPIELEMVRANSNTHYSVTLS
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEC
PTLIAIHSIEAEILDNKIGYIRLSSFQENTTQELVKQLSLWHPQQLNGIILDLRNNPGGL
CEEEEEEEHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCH
LDQAITIADLFLDKGRIVATEGRFFDANSDYYASPQTMATNIPMSVLINKGSASASEVLA
HHHHHHHHHHHHCCCCEEEECCEEEECCCCCCCCCCCEECCCCEEEEEECCCCCHHHHHH
AALQDNGRAQLIGQTSFGKGTIQSLIPTLMNGNAIKLTIAKYTTPNGNDIHLKGIEPDIK
HHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEEECCCCCEE
IELEAVSDSESMPIIETNSLRESVAQDKLVNSAIAWIKAEK
EEEEEECCCCCCCEEECHHHHHHHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]