| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963966
Identifier: 157963966
GI number: 157963966
Start: 5047314
End: 5047736
Strand: Reverse
Name: 157963966
Synonym: Spea_4155
Alternate gene names: NA
Gene position: 5047736-5047314 (Counterclockwise)
Preceding gene: 157963969
Following gene: 157963963
Centisome position: 97.55
GC content: 45.63
Gene sequence:
>423_bases ATGTTTAAAAAAGTAATCAGTGTCTTATTGTTGTGCTTGGCATTTAACGTTCATGCCGTGCCAACCGATGATATTGCAAA TATTTTGGCCGAGCAGGAAGCTGCATGGAATCGCGGTGACCTAGATGCTTATATGCAGGGCTATTGGAACAGTGACAAAA TGCGCTTCGTTTCCAATGGTAAATTCCGTTATGGCTGGGCAGAAACACTTGCCGCCTATAAGAAACATTATCCCGATAAA GCGACCTTAGGCTCGCTGACTTTTACGATTAAAGAGATCAAGATGCTCAGCAACTATGCGGCTATAGTTGTCGGCCGTTG GTCACTGGATCGCGCTAAAGACAACCCTAATGGCGTGTTCACGCTCTTGGTCGAGAAAATCGATGACCGTTGGGTGATCA CTCATGACCACACCTCTGATTAG
Upstream 100 bases:
>100_bases TGTTGCTTTCAGGGGCTTTAGCCAATAGGTATTGGTTGTAATACCCCGGATAGATATTTGAGGTATAGTACACCCAATAG AGCCAGATTGGAGAGAGGCA
Downstream 100 bases:
>100_bases TGAAGCATCTGCTTCTTAAATAGCTCTGCTATCTTTGCAATAGTAAGTTGCAATATTGGCGCATTTGGCTCTGTTTTGAT AAACAGAGCTAAGTTAAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MFKKVISVLLLCLAFNVHAVPTDDIANILAEQEAAWNRGDLDAYMQGYWNSDKMRFVSNGKFRYGWAETLAAYKKHYPDK ATLGSLTFTIKEIKMLSNYAAIVVGRWSLDRAKDNPNGVFTLLVEKIDDRWVITHDHTSD
Sequences:
>Translated_140_residues MFKKVISVLLLCLAFNVHAVPTDDIANILAEQEAAWNRGDLDAYMQGYWNSDKMRFVSNGKFRYGWAETLAAYKKHYPDK ATLGSLTFTIKEIKMLSNYAAIVVGRWSLDRAKDNPNGVFTLLVEKIDDRWVITHDHTSD >Mature_140_residues MFKKVISVLLLCLAFNVHAVPTDDIANILAEQEAAWNRGDLDAYMQGYWNSDKMRFVSNGKFRYGWAETLAAYKKHYPDK ATLGSLTFTIKEIKMLSNYAAIVVGRWSLDRAKDNPNGVFTLLVEKIDDRWVITHDHTSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16002; Mature: 16002
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKKVISVLLLCLAFNVHAVPTDDIANILAEQEAAWNRGDLDAYMQGYWNSDKMRFVSNG CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEECC KFRYGWAETLAAYKKHYPDKATLGSLTFTIKEIKMLSNYAAIVVGRWSLDRAKDNPNGVF CEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEE TLLVEKIDDRWVITHDHTSD EEEEECCCCCEEEECCCCCC >Mature Secondary Structure MFKKVISVLLLCLAFNVHAVPTDDIANILAEQEAAWNRGDLDAYMQGYWNSDKMRFVSNG CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEECC KFRYGWAETLAAYKKHYPDKATLGSLTFTIKEIKMLSNYAAIVVGRWSLDRAKDNPNGVF CEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEE TLLVEKIDDRWVITHDHTSD EEEEECCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA