| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is modB [H]
Identifier: 157963925
GI number: 157963925
Start: 5000048
End: 5000728
Strand: Reverse
Name: modB [H]
Synonym: Spea_4114
Alternate gene names: 157963925
Gene position: 5000728-5000048 (Counterclockwise)
Preceding gene: 157963926
Following gene: 157963924
Centisome position: 96.64
GC content: 51.4
Gene sequence:
>681_bases ATGGATTGGGAAGCGTTACTGCTATCGATTAAGCTCAGCAGCGTGACTGTGCTTATCTTGATCCCGTTAGCGATTCTAGC GGGGCGTTTTCTGGCTTATCGGCATTTTCCCGGTAAGTCATGGGTCGAAGCCTTAGTCATGGTGCCACTGGTGTTGCCAC CAACGGTTATCGGCTACTACCTGCTGGTGGGGCTCGGTAGCGAATCTTGGCTTGGCCGCATGTTAGAGCAACTGCTTGGC CACCAACTGGTATTTCACTTCTCAGGGCTGGTGGTTGCCTCCATCTTAGTCAATATTCCTTTTGCGATTCAGCCAATTCA GCGTGCTTTTGAAGCTGTGCCTGAAGATGTGCGTGACGCCGCGGCCTGCTGCGGTATGAGCCGACTTAAGGTGCTATTTA AGATCGAACTGCCTATGGTTTGGCCGGGCGTATTAACCGCCATCGTATTGTGTTTTTCTCATGTACTCGGTGAGTTTGGT GTGGTGCTGATGATGGGCGGTAATATTGCTGGCGAAACCAAGACCATTGCCATCTCAATTTACGACAGCGTACAGGCATT CGATTTTGCCAGTGCGGGCAATATGTCGCTGGTACTCTTACTGTTTGCGGTTACGGTATTGGCGTTAACAACCAGCCTAT CGCGCCGTGTTGGAGGTCAGCATGTCGCAAATCGTCGCTGA
Upstream 100 bases:
>100_bases TAAAAGCGGGCGAAACCGCCAAATTGTTTTATACCTATCTGCAGTCTGAGGCCGCTCAGAGTGTGTTTGCCGACTACGGC TTTGCGAGAGCGATGAATTA
Downstream 100 bases:
>100_bases TCTCTATTGCCGCATTAAACAGGCAAAGCATATTAAGCTCGATGCTGAGTTTAGCTGTAAGGCCGGAGAAGTCTTGGCGG TTGTTGGGCCCTCCGGTGGT
Product: molybdate ABC transporter inner membrane subunit
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MDWEALLLSIKLSSVTVLILIPLAILAGRFLAYRHFPGKSWVEALVMVPLVLPPTVIGYYLLVGLGSESWLGRMLEQLLG HQLVFHFSGLVVASILVNIPFAIQPIQRAFEAVPEDVRDAAACCGMSRLKVLFKIELPMVWPGVLTAIVLCFSHVLGEFG VVLMMGGNIAGETKTIAISIYDSVQAFDFASAGNMSLVLLLFAVTVLALTTSLSRRVGGQHVANRR
Sequences:
>Translated_226_residues MDWEALLLSIKLSSVTVLILIPLAILAGRFLAYRHFPGKSWVEALVMVPLVLPPTVIGYYLLVGLGSESWLGRMLEQLLG HQLVFHFSGLVVASILVNIPFAIQPIQRAFEAVPEDVRDAAACCGMSRLKVLFKIELPMVWPGVLTAIVLCFSHVLGEFG VVLMMGGNIAGETKTIAISIYDSVQAFDFASAGNMSLVLLLFAVTVLALTTSLSRRVGGQHVANRR >Mature_226_residues MDWEALLLSIKLSSVTVLILIPLAILAGRFLAYRHFPGKSWVEALVMVPLVLPPTVIGYYLLVGLGSESWLGRMLEQLLG HQLVFHFSGLVVASILVNIPFAIQPIQRAFEAVPEDVRDAAACCGMSRLKVLFKIELPMVWPGVLTAIVLCFSHVLGEFG VVLMMGGNIAGETKTIAISIYDSVQAFDFASAGNMSLVLLLFAVTVLALTTSLSRRVGGQHVANRR
Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4149
COG function: function code P; ABC-type molybdate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786980, Length=184, Percent_Identity=38.0434782608696, Blast_Score=116, Evalue=1e-27, Organism=Escherichia coli, GI1788764, Length=192, Percent_Identity=29.1666666666667, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI87082099, Length=220, Percent_Identity=27.2727272727273, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1786254, Length=220, Percent_Identity=26.3636363636364, Blast_Score=67, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24533; Mature: 24533
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDWEALLLSIKLSSVTVLILIPLAILAGRFLAYRHFPGKSWVEALVMVPLVLPPTVIGYY CCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHH LLVGLGSESWLGRMLEQLLGHQLVFHFSGLVVASILVNIPFAIQPIQRAFEAVPEDVRDA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHH AACCGMSRLKVLFKIELPMVWPGVLTAIVLCFSHVLGEFGVVLMMGGNIAGETKTIAISI HHHCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEE YDSVQAFDFASAGNMSLVLLLFAVTVLALTTSLSRRVGGQHVANRR ECCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MDWEALLLSIKLSSVTVLILIPLAILAGRFLAYRHFPGKSWVEALVMVPLVLPPTVIGYY CCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHH LLVGLGSESWLGRMLEQLLGHQLVFHFSGLVVASILVNIPFAIQPIQRAFEAVPEDVRDA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHH AACCGMSRLKVLFKIELPMVWPGVLTAIVLCFSHVLGEFGVVLMMGGNIAGETKTIAISI HHHCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEE YDSVQAFDFASAGNMSLVLLLFAVTVLALTTSLSRRVGGQHVANRR ECCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8384683; 7665518 [H]