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The map label for this gene is ydjX [C]

Identifier: 157963916

GI number: 157963916

Start: 4992251

End: 4992916

Strand: Reverse

Name: ydjX [C]

Synonym: Spea_4105

Alternate gene names: 157963916

Gene position: 4992916-4992251 (Counterclockwise)

Preceding gene: 157963917

Following gene: 157963913

Centisome position: 96.49

GC content: 45.05

Gene sequence:

>666_bases
ATGAAGCGTTTTGCGAAAATATTATCCATCATTACCGTGTTATCACTGGTTATATACGCGTTTCAACAAGGCGCGTTTGC
TACCGTTGCCGATAGTAATTGGATTGCCGACTATTTAGCCGAGCAGGGTGATAAGGGGCTTGTGGTACTGTTCCTCATTG
GCGCGGCTTATACCAGTGTTGGTGGACCAAGACAGTTTATGGCATTTGCCTTTGGCTTTGCATTGGGCGGTATAAAAGGC
GCACTAATAGGTAGCCTATCCGCGCTACTTGGCTGCGTGATCACCTTTTATTTTGCGCGCTGGGTTTTTAGAAGTAGCTT
AAAAAAGCGCTTTCAATCCAAATTAACGCGCTTAGAGAATTTGATCATTCACCGCACCATATTGAAGATGATCATGATCC
GGATCTTGCCGCTCAGCAGCAATTTTCTCACTAATCTAGTGGCGGGCTCGACCCACATAAGTGCTTGGCGCTTTTTCACC
GGTAGCGGCATAGGTTTTATCCCGCAAATGATGGTGTTTAGCTTTGCAGGAGCTGGGGTGGGTCTGTCTGATAACACCAG
TCTGTTAATCAGTGGTGGCCTATTTTTGTGTGCATCAATAATTGCTTTTTATCTGTATAAGACTCGGCTAAGACAGCAGA
TCAGCGAGATTATTGAAGAGAAATAA

Upstream 100 bases:

>100_bases
AAGTTTTAACTAACGCTTAAGCAATGAAAAAGCCAACGTTGATACGTTGGCTTTTTTGCTAATGCAGCTTAAGCATTAAG
AGAATGATTGCGGATTGGCT

Downstream 100 bases:

>100_bases
CCTTGCTTATCAGCTGTTACTTGCTATGTGCTAGCCGGTTATCTTTGCTGGCACAAGCTACAGAAAACCGTTGCCCGTTG
GCCGAGTTTAATTTCACTGA

Product: hypothetical protein

Products: NA

Alternate protein names: SNARE Associated Golgi Protein-Like Protein

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MKRFAKILSIITVLSLVIYAFQQGAFATVADSNWIADYLAEQGDKGLVVLFLIGAAYTSVGGPRQFMAFAFGFALGGIKG
ALIGSLSALLGCVITFYFARWVFRSSLKKRFQSKLTRLENLIIHRTILKMIMIRILPLSSNFLTNLVAGSTHISAWRFFT
GSGIGFIPQMMVFSFAGAGVGLSDNTSLLISGGLFLCASIIAFYLYKTRLRQQISEIIEEK

Sequences:

>Translated_221_residues
MKRFAKILSIITVLSLVIYAFQQGAFATVADSNWIADYLAEQGDKGLVVLFLIGAAYTSVGGPRQFMAFAFGFALGGIKG
ALIGSLSALLGCVITFYFARWVFRSSLKKRFQSKLTRLENLIIHRTILKMIMIRILPLSSNFLTNLVAGSTHISAWRFFT
GSGIGFIPQMMVFSFAGAGVGLSDNTSLLISGGLFLCASIIAFYLYKTRLRQQISEIIEEK
>Mature_221_residues
MKRFAKILSIITVLSLVIYAFQQGAFATVADSNWIADYLAEQGDKGLVVLFLIGAAYTSVGGPRQFMAFAFGFALGGIKG
ALIGSLSALLGCVITFYFARWVFRSSLKKRFQSKLTRLENLIIHRTILKMIMIRILPLSSNFLTNLVAGSTHISAWRFFT
GSGIGFIPQMMVFSFAGAGVGLSDNTSLLISGGLFLCASIIAFYLYKTRLRQQISEIIEEK

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24279; Mature: 24279

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFAKILSIITVLSLVIYAFQQGAFATVADSNWIADYLAEQGDKGLVVLFLIGAAYTSV
CHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCEEHHHHHHHHHHCC
GGPRQFMAFAFGFALGGIKGALIGSLSALLGCVITFYFARWVFRSSLKKRFQSKLTRLEN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIIHRTILKMIMIRILPLSSNFLTNLVAGSTHISAWRFFTGSGIGFIPQMMVFSFAGAGV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
GLSDNTSLLISGGLFLCASIIAFYLYKTRLRQQISEIIEEK
CCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRFAKILSIITVLSLVIYAFQQGAFATVADSNWIADYLAEQGDKGLVVLFLIGAAYTSV
CHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCEEHHHHHHHHHHCC
GGPRQFMAFAFGFALGGIKGALIGSLSALLGCVITFYFARWVFRSSLKKRFQSKLTRLEN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIIHRTILKMIMIRILPLSSNFLTNLVAGSTHISAWRFFTGSGIGFIPQMMVFSFAGAGV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
GLSDNTSLLISGGLFLCASIIAFYLYKTRLRQQISEIIEEK
CCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA