Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157963896

Identifier: 157963896

GI number: 157963896

Start: 4966547

End: 4967083

Strand: Reverse

Name: 157963896

Synonym: Spea_4085

Alternate gene names: NA

Gene position: 4967083-4966547 (Counterclockwise)

Preceding gene: 157963897

Following gene: 157963895

Centisome position: 95.99

GC content: 45.25

Gene sequence:

>537_bases
ATGAAGTCTCAATTCGATCTGCAAGACGCCTTATTTATCGGTTTTTGTGCCACCTTGTTGGTGGTTTTAAAAAGCATGTT
GCGACTCAAGCTTGGCTTAAGTGGCCACTCAATGTTTTTGATGACCTTTTTCTACCTTATTTGCTACGGCGTAGTTAATC
GCGTTGGCGCTATGACAGCATGTGGTTTATTAGCTGGGCTAGTGGCCATGATGCTGAGTGTTGGTAAAGGGGGCCCAATG
ATCTTGCTTAAGTTTGGTTTGCCAGCAATGGCAATGGACTTGGCGTTACTGTTTATGGCTGGGGCATTTAGTTTGCGTTG
GCAGAGCATAGTATTGGCGATAATTGGTTGTTTGGCGTGGTCAGGCAAAGGTTTGATAAGCAACTTATTAGTAGGAATGA
GTGGTCAAGTTGCACTGGCTGAATTTGGCCTTAGCTTTATTCAAGGTGGCATGTTTGCTGTGGCCGCTGCGCTATTAATT
CCAACGGTTCTAAGCCGTTTGCACGCACACGATTTATTGCCGAAAAGGCCTGAGTAA

Upstream 100 bases:

>100_bases
AGCTACTTAAATTATCAAAACAGATGGCGAAAGCCGCCAAACTGCGTCATTTCGGCAAAGTAAATAAGCCAACCCATTGG
CCTGCAAAAAGAGAGGAAGA

Downstream 100 bases:

>100_bases
CGACGTAAAAGATAAGCATAGCTATTTTACGCGGTTAAGAACTCATTCGACGTAGAAACATAACATTAATAATAAGGGTT
TTAGATGAAAGCTTGGTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MKSQFDLQDALFIGFCATLLVVLKSMLRLKLGLSGHSMFLMTFFYLICYGVVNRVGAMTACGLLAGLVAMMLSVGKGGPM
ILLKFGLPAMAMDLALLFMAGAFSLRWQSIVLAIIGCLAWSGKGLISNLLVGMSGQVALAEFGLSFIQGGMFAVAAALLI
PTVLSRLHAHDLLPKRPE

Sequences:

>Translated_178_residues
MKSQFDLQDALFIGFCATLLVVLKSMLRLKLGLSGHSMFLMTFFYLICYGVVNRVGAMTACGLLAGLVAMMLSVGKGGPM
ILLKFGLPAMAMDLALLFMAGAFSLRWQSIVLAIIGCLAWSGKGLISNLLVGMSGQVALAEFGLSFIQGGMFAVAAALLI
PTVLSRLHAHDLLPKRPE
>Mature_178_residues
MKSQFDLQDALFIGFCATLLVVLKSMLRLKLGLSGHSMFLMTFFYLICYGVVNRVGAMTACGLLAGLVAMMLSVGKGGPM
ILLKFGLPAMAMDLALLFMAGAFSLRWQSIVLAIIGCLAWSGKGLISNLLVGMSGQVALAEFGLSFIQGGMFAVAAALLI
PTVLSRLHAHDLLPKRPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18945; Mature: 18945

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
7.3 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSQFDLQDALFIGFCATLLVVLKSMLRLKLGLSGHSMFLMTFFYLICYGVVNRVGAMTA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
CGLLAGLVAMMLSVGKGGPMILLKFGLPAMAMDLALLFMAGAFSLRWQSIVLAIIGCLAW
HHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGKGLISNLLVGMSGQVALAEFGLSFIQGGMFAVAAALLIPTVLSRLHAHDLLPKRPE
CCCHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKSQFDLQDALFIGFCATLLVVLKSMLRLKLGLSGHSMFLMTFFYLICYGVVNRVGAMTA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
CGLLAGLVAMMLSVGKGGPMILLKFGLPAMAMDLALLFMAGAFSLRWQSIVLAIIGCLAW
HHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGKGLISNLLVGMSGQVALAEFGLSFIQGGMFAVAAALLIPTVLSRLHAHDLLPKRPE
CCCHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA