| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157963894
Identifier: 157963894
GI number: 157963894
Start: 4964040
End: 4965224
Strand: Reverse
Name: 157963894
Synonym: Spea_4083
Alternate gene names: NA
Gene position: 4965224-4964040 (Counterclockwise)
Preceding gene: 157963895
Following gene: 157963893
Centisome position: 95.95
GC content: 46.08
Gene sequence:
>1185_bases ATGGGTGATTCAATTGAATCAAGTAACTTAATAAAAATACCTGTATCCAAGCTGAAGCTAGGTATGTTTGTTGAGGCCAT CGACAAAGATAAGAGTCTAGTCAACATCGCCAATGCGGGACAAATTCGCAGCGCCGAAGCCATATTGAGATTGCATAAAA GCAATGTCAGTCATGTGTGGGTTAACGGCGAGCGCTCACTGCCAGAGTTAGGTTTAGGTAAAGTCGTATCGGCGCCTAAA CCTGTGGCAAGAAAAGTGAGTGTTGAACGTGCTACGACTCAGAAGCAGGCTAAAGAGCTTATTGTTGAGGCAAAAGATCT CATCCAAAAGGTGCTGTCTGAAACGTTCGAGGGCAAAGCGGTAGAGGTTGAACCTTTCGAGGCGTTAGCCGACAACTTAA TTGAGTCTGTTATGCTCGATGCCGATGCGCTTAAATGTGTGTCAGCCCTGCGTTCCAAAGATGCTTATCTATTAGAGCAC TCTATCAATGTGGCATTTTTGCTTATTACCTTTGGTCGTTACCTCAAGTTTGATACCGATATGCTGCGCCAGATGGCCAT CGGTGGCATTTTGCATGATATCGGTAAGATTAAGGTCGACAGCGAGATTTTAAATAAGCCAAGCAAACTCACTCCGGAAG AGTTCGAGCACGTTAAGTTACACCAAACTTATGCAGTTGAGATCATGGGGCAGACTAAAGGCTTATCCCAGATCAGCCAA GATATTAGCCTGATGCACCACGAGAAACTCGATGGTAATGGTTACCCTCTTGGTCTCAAGGGCGATGAAATACCTACCCA TGGCCGTATGAGCTGTATTGTCGATATCTTCGATGCCTTAACCGCCACTCGCTGTTATAAAGAGGCGATGAGCCCAGCCG CAGCATTTAAGATCTTACTTAGCCTGACTCCTCACCACTTAGATCAACAGCTCGTATATGAGTTTATCCGCTGTATCGGC GTCTACCCTGTTGGCTCCTTAGTGCAGCTGTCCGATGGCCGTATCGGTATCGTCTGGGAAGCAAAAGGGCGCAATGCGCT AAATCCTAAGGTGAAGTGCTTCTATTCGGTAAAGCATAAGTGCTACACCAAGGTTGAGATCATCGACCTGCTCAGATCGT CATTAAATATCGAGAAAGGCATATCGCCGAGTAGCCTAGAGATCGATCCCACCCCTTTTTATTAA
Upstream 100 bases:
>100_bases GCTTGGTGTAAACTGAGTCACAACATAAAACCACTGTGAAGAGTACAGTTGAATATTGTCACTGTAATTTAGGCTAAGTC ATCCGGGGACCTAAGAGATA
Downstream 100 bases:
>100_bases GCACTGTCTTAATTGCCTATCGCCACTAACAAAAGCGCTGAGTTCAACTCGGCGCTTTTTTGTATAGTGATACCTCCCAT TTATTTTCAAAATTTGAGCG
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MGDSIESSNLIKIPVSKLKLGMFVEAIDKDKSLVNIANAGQIRSAEAILRLHKSNVSHVWVNGERSLPELGLGKVVSAPK PVARKVSVERATTQKQAKELIVEAKDLIQKVLSETFEGKAVEVEPFEALADNLIESVMLDADALKCVSALRSKDAYLLEH SINVAFLLITFGRYLKFDTDMLRQMAIGGILHDIGKIKVDSEILNKPSKLTPEEFEHVKLHQTYAVEIMGQTKGLSQISQ DISLMHHEKLDGNGYPLGLKGDEIPTHGRMSCIVDIFDALTATRCYKEAMSPAAAFKILLSLTPHHLDQQLVYEFIRCIG VYPVGSLVQLSDGRIGIVWEAKGRNALNPKVKCFYSVKHKCYTKVEIIDLLRSSLNIEKGISPSSLEIDPTPFY
Sequences:
>Translated_394_residues MGDSIESSNLIKIPVSKLKLGMFVEAIDKDKSLVNIANAGQIRSAEAILRLHKSNVSHVWVNGERSLPELGLGKVVSAPK PVARKVSVERATTQKQAKELIVEAKDLIQKVLSETFEGKAVEVEPFEALADNLIESVMLDADALKCVSALRSKDAYLLEH SINVAFLLITFGRYLKFDTDMLRQMAIGGILHDIGKIKVDSEILNKPSKLTPEEFEHVKLHQTYAVEIMGQTKGLSQISQ DISLMHHEKLDGNGYPLGLKGDEIPTHGRMSCIVDIFDALTATRCYKEAMSPAAAFKILLSLTPHHLDQQLVYEFIRCIG VYPVGSLVQLSDGRIGIVWEAKGRNALNPKVKCFYSVKHKCYTKVEIIDLLRSSLNIEKGISPSSLEIDPTPFY >Mature_393_residues GDSIESSNLIKIPVSKLKLGMFVEAIDKDKSLVNIANAGQIRSAEAILRLHKSNVSHVWVNGERSLPELGLGKVVSAPKP VARKVSVERATTQKQAKELIVEAKDLIQKVLSETFEGKAVEVEPFEALADNLIESVMLDADALKCVSALRSKDAYLLEHS INVAFLLITFGRYLKFDTDMLRQMAIGGILHDIGKIKVDSEILNKPSKLTPEEFEHVKLHQTYAVEIMGQTKGLSQISQD ISLMHHEKLDGNGYPLGLKGDEIPTHGRMSCIVDIFDALTATRCYKEAMSPAAAFKILLSLTPHHLDQQLVYEFIRCIGV YPVGSLVQLSDGRIGIVWEAKGRNALNPKVKCFYSVKHKCYTKVEIIDLLRSSLNIEKGISPSSLEIDPTPFY
Specific function: Unknown
COG id: COG2206
COG function: function code T; HD-GYP domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR000160 - InterPro: IPR003607 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43633; Mature: 43502
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDSIESSNLIKIPVSKLKLGMFVEAIDKDKSLVNIANAGQIRSAEAILRLHKSNVSHVW CCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEE VNGERSLPELGLGKVVSAPKPVARKVSVERATTQKQAKELIVEAKDLIQKVLSETFEGKA ECCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE VEVEPFEALADNLIESVMLDADALKCVSALRSKDAYLLEHSINVAFLLITFGRYLKFDTD EEECHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCEEEECCCCCEEHEEHHHHHHHCCHH MLRQMAIGGILHDIGKIKVDSEILNKPSKLTPEEFEHVKLHQTYAVEIMGQTKGLSQISQ HHHHHHHHHHHHHHHCEEECHHHHCCCCCCCHHHHHHEEEEHEEEEEEECCCCCHHHHHH DISLMHHEKLDGNGYPLGLKGDEIPTHGRMSCIVDIFDALTATRCYKEAMSPAAAFKILL HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH SLTPHHLDQQLVYEFIRCIGVYPVGSLVQLSDGRIGIVWEAKGRNALNPKVKCFYSVKHK HCCCHHCCHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCEEEEEHHHH CYTKVEIIDLLRSSLNIEKGISPSSLEIDPTPFY HHHHHHHHHHHHHHCCHHCCCCCCCEECCCCCCC >Mature Secondary Structure GDSIESSNLIKIPVSKLKLGMFVEAIDKDKSLVNIANAGQIRSAEAILRLHKSNVSHVW CCCCCCCCEEECCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEE VNGERSLPELGLGKVVSAPKPVARKVSVERATTQKQAKELIVEAKDLIQKVLSETFEGKA ECCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE VEVEPFEALADNLIESVMLDADALKCVSALRSKDAYLLEHSINVAFLLITFGRYLKFDTD EEECHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCEEEECCCCCEEHEEHHHHHHHCCHH MLRQMAIGGILHDIGKIKVDSEILNKPSKLTPEEFEHVKLHQTYAVEIMGQTKGLSQISQ HHHHHHHHHHHHHHHCEEECHHHHCCCCCCCHHHHHHEEEEHEEEEEEECCCCCHHHHHH DISLMHHEKLDGNGYPLGLKGDEIPTHGRMSCIVDIFDALTATRCYKEAMSPAAAFKILL HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH SLTPHHLDQQLVYEFIRCIGVYPVGSLVQLSDGRIGIVWEAKGRNALNPKVKCFYSVKHK HCCCHHCCHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCEEEEEHHHH CYTKVEIIDLLRSSLNIEKGISPSSLEIDPTPFY HHHHHHHHHHHHHHCCHHCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]