| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yqhT [H]
Identifier: 157963888
GI number: 157963888
Start: 4957158
End: 4958324
Strand: Reverse
Name: yqhT [H]
Synonym: Spea_4077
Alternate gene names: 157963888
Gene position: 4958324-4957158 (Counterclockwise)
Preceding gene: 157963893
Following gene: 157963887
Centisome position: 95.82
GC content: 48.16
Gene sequence:
>1167_bases ATGAAAAGCATATTACAGCGTGGATTTACAACAGCTGAATTTGAAATGCGTGCAACTAAAGCACAGCAGAAGATGCGTGA GCTAGAAGTCGACGCGATACTGTTAACTACCGAGCCTAACGTGCGTTACTTTTCAGGCTTCCACACCCAGTTCTGGCACA GCCCGACTCGTCCATGGTTCCTAATCCTACCTGCTGAAGGTAAGCCAATCGCGGTTATTCCTGAAATCGGCGCAAGCGGT ATGGCGGGTACTTGGGTTGATGATATCCGTACTTGGGCATCACCACGTCCTGATGACGACGGTATCAGTATCGTAGCTAG CGTACTTAATAGCTTACCTTCACGCTTTGGCCGTGTAGGTGCAACACTAGGTATTGAATCTCACCTACGTATGCCAGTGG CTAACTACCTACAGTTAACTACATTAGTCAGCAAAGAGTTTGTTGACGTTTCACTAGCGATTCACGACATTCGCCAAGTT AAGTCTGTGACTGAAATTGAAAAGGTGCGTGAAATTTGTCGCATCACTAACGTAGGTTTCGACAAGATCCCTAGTTACGC AAAGGCCGGTATGACAGAGCGTGAAATCTGTAAGCAGTTCGGTATCGATATGCTGATGGAAGGCGCCGATGAATGTCCAT ACATCATCGCTGGTTCAGGCCAAGACGGTTACGACAGCATCATCATGGGTCCAACTGACCGCGTGATCGAAGACGGCGAC GTACTAATCATCGACACGGGTGCAGTACGTGACGGTTACTTCTCAGATTTTGACCGTAACTGGGCATTTGGCCACGCAAG TGAGCAGACTAAAGCCGCTTACCGCGCAACTTACGAAGCAACCACTATGGGCTTTGAAGCTGCACGTCCAGGTAACACCA CTTCAGACATCTACAACGCAATGTGGAAAGTACTAGAAGCTAACGGCGCACTAGGTAACGACGTAGGTCGTCTAGGTCAC GGCCTAGGTATCGAGCTTACTGAGCGTCCATCTAACACAGCAACAGACAACACAATATTAGTGCCAGGCATGATCATGAC TCTAGAGCCAGGCATGGTTTACGCACCTGGTAAGTCTATGGTTCACGAAGAAAATATCGTGATCACCGAAAACGGTGCCG AGTGGTTAAGCAAACGCGCTGAACCAGAACTACTGATTATCAAATAA
Upstream 100 bases:
>100_bases ATGATGCGCACCAAGTTAACGATAGTTGACTAAAGCAGATTTCCGGTCACTTTAGTGACCTTTTGGCAAATAGGCCAGTT GTGTGGATGTGGAGATAAAA
Downstream 100 bases:
>100_bases TTTTAATATAGCCATTGATTTCTCCGGAGGGAGCCGGAGAAATCATTACTGAAGAGCATCTCATTATGATGAGTTTTGAA GCCTTTACCTCGTTTGAACA
Product: peptidase M24
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MKSILQRGFTTAEFEMRATKAQQKMRELEVDAILLTTEPNVRYFSGFHTQFWHSPTRPWFLILPAEGKPIAVIPEIGASG MAGTWVDDIRTWASPRPDDDGISIVASVLNSLPSRFGRVGATLGIESHLRMPVANYLQLTTLVSKEFVDVSLAIHDIRQV KSVTEIEKVREICRITNVGFDKIPSYAKAGMTEREICKQFGIDMLMEGADECPYIIAGSGQDGYDSIIMGPTDRVIEDGD VLIIDTGAVRDGYFSDFDRNWAFGHASEQTKAAYRATYEATTMGFEAARPGNTTSDIYNAMWKVLEANGALGNDVGRLGH GLGIELTERPSNTATDNTILVPGMIMTLEPGMVYAPGKSMVHEENIVITENGAEWLSKRAEPELLIIK
Sequences:
>Translated_388_residues MKSILQRGFTTAEFEMRATKAQQKMRELEVDAILLTTEPNVRYFSGFHTQFWHSPTRPWFLILPAEGKPIAVIPEIGASG MAGTWVDDIRTWASPRPDDDGISIVASVLNSLPSRFGRVGATLGIESHLRMPVANYLQLTTLVSKEFVDVSLAIHDIRQV KSVTEIEKVREICRITNVGFDKIPSYAKAGMTEREICKQFGIDMLMEGADECPYIIAGSGQDGYDSIIMGPTDRVIEDGD VLIIDTGAVRDGYFSDFDRNWAFGHASEQTKAAYRATYEATTMGFEAARPGNTTSDIYNAMWKVLEANGALGNDVGRLGH GLGIELTERPSNTATDNTILVPGMIMTLEPGMVYAPGKSMVHEENIVITENGAEWLSKRAEPELLIIK >Mature_388_residues MKSILQRGFTTAEFEMRATKAQQKMRELEVDAILLTTEPNVRYFSGFHTQFWHSPTRPWFLILPAEGKPIAVIPEIGASG MAGTWVDDIRTWASPRPDDDGISIVASVLNSLPSRFGRVGATLGIESHLRMPVANYLQLTTLVSKEFVDVSLAIHDIRQV KSVTEIEKVREICRITNVGFDKIPSYAKAGMTEREICKQFGIDMLMEGADECPYIIAGSGQDGYDSIIMGPTDRVIEDGD VLIIDTGAVRDGYFSDFDRNWAFGHASEQTKAAYRATYEATTMGFEAARPGNTTSDIYNAMWKVLEANGALGNDVGRLGH GLGIELTERPSNTATDNTILVPGMIMTLEPGMVYAPGKSMVHEENIVITENGAEWLSKRAEPELLIIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24B family [H]
Homologues:
Organism=Homo sapiens, GI11559925, Length=267, Percent_Identity=23.5955056179775, Blast_Score=71, Evalue=2e-12, Organism=Escherichia coli, GI1788728, Length=229, Percent_Identity=33.1877729257642, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1789275, Length=262, Percent_Identity=27.4809160305344, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI1786364, Length=260, Percent_Identity=27.3076923076923, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000587 - InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR001131 [H]
Pfam domain/function: PF01321 Creatinase_N; PF00557 Peptidase_M24 [H]
EC number: 3.4.-.- [C]
Molecular weight: Translated: 42801; Mature: 42801
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSILQRGFTTAEFEMRATKAQQKMRELEVDAILLTTEPNVRYFSGFHTQFWHSPTRPWF CHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCHHHCCCCCCCEE LILPAEGKPIAVIPEIGASGMAGTWVDDIRTWASPRPDDDGISIVASVLNSLPSRFGRVG EEEECCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC ATLGIESHLRMPVANYLQLTTLVSKEFVDVSLAIHDIRQVKSVTEIEKVREICRITNVGF HHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH DKIPSYAKAGMTEREICKQFGIDMLMEGADECPYIIAGSGQDGYDSIIMGPTDRVIEDGD HHCCCHHHCCCCHHHHHHHHCHHHHHCCCCCCCEEEECCCCCCCCCEEECCCCCEECCCC VLIIDTGAVRDGYFSDFDRNWAFGHASEQTKAAYRATYEATTMGFEAARPGNTTSDIYNA EEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH MWKVLEANGALGNDVGRLGHGLGIELTERPSNTATDNTILVPGMIMTLEPGMVYAPGKSM HHHHHHCCCCCCCCHHHHCCCCCEEEECCCCCCCCCCEEECCCEEEEECCCEEECCCCCC VHEENIVITENGAEWLSKRAEPELLIIK EECCCEEEECCCHHHHHHCCCCCEEEEC >Mature Secondary Structure MKSILQRGFTTAEFEMRATKAQQKMRELEVDAILLTTEPNVRYFSGFHTQFWHSPTRPWF CHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCHHHCCCCCCCEE LILPAEGKPIAVIPEIGASGMAGTWVDDIRTWASPRPDDDGISIVASVLNSLPSRFGRVG EEEECCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC ATLGIESHLRMPVANYLQLTTLVSKEFVDVSLAIHDIRQVKSVTEIEKVREICRITNVGF HHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH DKIPSYAKAGMTEREICKQFGIDMLMEGADECPYIIAGSGQDGYDSIIMGPTDRVIEDGD HHCCCHHHCCCCHHHHHHHHCHHHHHCCCCCCCEEEECCCCCCCCCEEECCCCCEECCCC VLIIDTGAVRDGYFSDFDRNWAFGHASEQTKAAYRATYEATTMGFEAARPGNTTSDIYNA EEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH MWKVLEANGALGNDVGRLGHGLGIELTERPSNTATDNTILVPGMIMTLEPGMVYAPGKSM HHHHHHCCCCCCCCHHHHCCCCCEEEECCCCCCCCCCEEECCCEEEEECCCEEECCCCCC VHEENIVITENGAEWLSKRAEPELLIIK EECCCEEEECCCHHHHHHCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]